RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 CACNB3P54284 484 aa16.74■□□□□ 0.27
VPS26A-209ENST00000497564 TOB2Q14106 344 aaPredicted RBP16.74■□□□□ 0.27
VPS26A-209ENST00000497564 RASA3Q14644 834 aa16.74■□□□□ 0.27
VPS26A-209ENST00000497564 MAPKAPK5Q8IW41 473 aa16.74■□□□□ 0.27
VPS26A-209ENST00000497564 ZSCAN31Q96LW9 406 aaPredicted RBP16.74■□□□□ 0.27
VPS26A-209ENST00000497564 MTA3Q9BTC8 594 aa16.74■□□□□ 0.27
VPS26A-209ENST00000497564 IDI2Q9BXS1 227 aa16.74■□□□□ 0.27
VPS26A-209ENST00000497564 LIMCH1Q9UPQ0 1083 aa16.74■□□□□ 0.27
VPS26A-209ENST00000497564 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.74■□□□□ 0.27
VPS26A-209ENST00000497564 TACC3Q9Y6A5 838 aa16.74■□□□□ 0.27
VPS26A-209ENST00000497564 TCP10L2B9ZVM9 353 aa16.73■□□□□ 0.27
VPS26A-209ENST00000497564 ORC4O43929 436 aa16.73■□□□□ 0.27
VPS26A-209ENST00000497564 CUL4AQ13619 759 aa16.73■□□□□ 0.27
VPS26A-209ENST00000497564 TTLL12Q14166 644 aaPredicted RBP16.73■□□□□ 0.27
VPS26A-209ENST00000497564 NBPF12Q5TAG4 269 aaPredicted RBP16.73■□□□□ 0.27
VPS26A-209ENST00000497564 TMX3Q96JJ7 454 aa16.73■□□□□ 0.27
VPS26A-209ENST00000497564 CYP2D7A0A087X1C5 515 aa16.72■□□□□ 0.27
VPS26A-209ENST00000497564 SLC10A3P09131 477 aa16.72■□□□□ 0.27
VPS26A-209ENST00000497564 MAP2K2P36507 400 aa16.72■□□□□ 0.27
VPS26A-209ENST00000497564 ANTXR2P58335 489 aa16.72■□□□□ 0.27
VPS26A-209ENST00000497564 FKBP1BP68106 108 aa16.72■□□□□ 0.27
VPS26A-209ENST00000497564 Q6ZUG5 572 aa16.72■□□□□ 0.27
VPS26A-209ENST00000497564 RASAL3Q86YV0 1011 aa16.72■□□□□ 0.27
VPS26A-209ENST00000497564 SH2B1Q9NRF2 756 aaPredicted RBP16.72■□□□□ 0.27
VPS26A-209ENST00000497564 TSKSQ9UJT2 592 aa16.72■□□□□ 0.27
VPS26A-209ENST00000497564 TAOK2Q9UL54 1235 aa16.72■□□□□ 0.27
VPS26A-209ENST00000497564 B4E1Z4 1266 aa16.71■□□□□ 0.27
VPS26A-209ENST00000497564 PRC1O43663 620 aa16.71■□□□□ 0.27
VPS26A-209ENST00000497564 CYP2D6P10635 497 aa16.71■□□□□ 0.27
VPS26A-209ENST00000497564 EVCP57679 992 aa16.71■□□□□ 0.27
VPS26A-209ENST00000497564 MAP2K1Q02750 393 aaPredicted RBP16.71■□□□□ 0.27
VPS26A-209ENST00000497564 NOGQ13253 232 aa16.71■□□□□ 0.27
VPS26A-209ENST00000497564 TMEM87BQ96K49 555 aa16.71■□□□□ 0.27
VPS26A-209ENST00000497564 TCEANC2Q96MN5 208 aa16.71■□□□□ 0.27
VPS26A-209ENST00000497564 TMEM39BQ9GZU3 492 aa16.71■□□□□ 0.27
VPS26A-209ENST00000497564 OSBPL5Q9H0X9 879 aaPredicted RBP16.71■□□□□ 0.27
VPS26A-209ENST00000497564 DDX4Q9NQI0 724 aaKnown RBP16.71■□□□□ 0.27
VPS26A-209ENST00000497564 MYH6P13533 1939 aa16.7■□□□□ 0.26
VPS26A-209ENST00000497564 ATRNL1Q5VV63 1379 aa16.7■□□□□ 0.26
VPS26A-209ENST00000497564 ENTPD3O75355 529 aa16.7■□□□□ 0.26
VPS26A-209ENST00000497564 POLR3DP05423 398 aaPredicted RBP16.7■□□□□ 0.26
VPS26A-209ENST00000497564 HSPA8P11142 646 aaKnown RBP16.7■□□□□ 0.26
VPS26A-209ENST00000497564 NF2P35240 595 aa16.7■□□□□ 0.26
VPS26A-209ENST00000497564 KIF23Q02241 960 aaPredicted RBP16.7■□□□□ 0.26
VPS26A-209ENST00000497564 PDE4BQ07343 736 aa16.7■□□□□ 0.26
VPS26A-209ENST00000497564 FKBP1CQ5VVH2 108 aa16.7■□□□□ 0.26
VPS26A-209ENST00000497564 CYB5R4Q7L1T6 521 aa16.7■□□□□ 0.26
VPS26A-209ENST00000497564 ESR2Q92731 530 aa16.7■□□□□ 0.26
VPS26A-209ENST00000497564 INTS4Q96HW7 963 aaKnown RBP16.7■□□□□ 0.26
VPS26A-209ENST00000497564 TEPSINQ96N21 525 aa16.7■□□□□ 0.26
VPS26A-209ENST00000497564 ZSWIM5Q9P217 1185 aa16.7■□□□□ 0.26
VPS26A-209ENST00000497564 ANGEL1Q9UNK9 670 aaKnown RBP16.7■□□□□ 0.26
VPS26A-209ENST00000497564 MYH4Q9Y623 1939 aa16.7■□□□□ 0.26
VPS26A-209ENST00000497564 SMIM22K7EJ46 135 aa16.69■□□□□ 0.26
VPS26A-209ENST00000497564 KDM4AO75164 1064 aa16.69■□□□□ 0.26
VPS26A-209ENST00000497564 PLCD1P51178 756 aa16.69■□□□□ 0.26
VPS26A-209ENST00000497564 LBX1P52954 281 aa16.69■□□□□ 0.26
VPS26A-209ENST00000497564 NFIAQ12857 509 aa16.69■□□□□ 0.26
VPS26A-209ENST00000497564 LDLRAD1Q5T700 205 aa16.69■□□□□ 0.26
VPS26A-209ENST00000497564 C16orf86Q6ZW13 317 aa16.69■□□□□ 0.26
VPS26A-209ENST00000497564 TTC6Q86TZ1 520 aa16.69■□□□□ 0.26
VPS26A-209ENST00000497564 NKX2-3Q8TAU0 364 aa16.69■□□□□ 0.26
VPS26A-209ENST00000497564 CCDC102AQ96A19 550 aa16.69■□□□□ 0.26
VPS26A-209ENST00000497564 CLMNQ96JQ2 1002 aa16.69■□□□□ 0.26
VPS26A-209ENST00000497564 ZNF287Q9HBT7 754 aa16.69■□□□□ 0.26
VPS26A-209ENST00000497564 INCENPQ9NQS7 918 aa16.69■□□□□ 0.26
VPS26A-209ENST00000497564 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.69■□□□□ 0.26
VPS26A-209ENST00000497564 FAM198AQ9UFP1 575 aa16.69■□□□□ 0.26
VPS26A-209ENST00000497564 SAP30BPQ9UHR5 308 aaKnown RBP16.69■□□□□ 0.26
VPS26A-209ENST00000497564 TPCN1Q9ULQ1 816 aa16.69■□□□□ 0.26
VPS26A-209ENST00000497564 PPP2R3BQ9Y5P8 575 aa16.69■□□□□ 0.26
VPS26A-209ENST00000497564 SH2B2O14492 632 aaPredicted RBP16.68■□□□□ 0.26
VPS26A-209ENST00000497564 CTCFP49711 727 aaPredicted RBP16.68■□□□□ 0.26
VPS26A-209ENST00000497564 FGD1P98174 961 aa16.68■□□□□ 0.26
VPS26A-209ENST00000497564 EVX2Q03828 476 aa16.68■□□□□ 0.26
VPS26A-209ENST00000497564 MKRN3Q13064 507 aaKnown RBP16.68■□□□□ 0.26
VPS26A-209ENST00000497564 PICALMQ13492 652 aa16.68■□□□□ 0.26
VPS26A-209ENST00000497564 NOL8Q76FK4 1167 aaKnown RBP16.68■□□□□ 0.26
VPS26A-209ENST00000497564 BRF1Q92994 677 aa16.68■□□□□ 0.26
VPS26A-209ENST00000497564 LRRC2Q9BYS8 371 aa16.68■□□□□ 0.26
VPS26A-209ENST00000497564 EHD4Q9H223 541 aa16.68■□□□□ 0.26
VPS26A-209ENST00000497564 DHX36Q9H2U1 1008 aaKnown RBP16.68■□□□□ 0.26
VPS26A-209ENST00000497564 TMOD2Q9NZR1 351 aa16.68■□□□□ 0.26
VPS26A-209ENST00000497564 LARGE1O95461 756 aa16.67■□□□□ 0.26
VPS26A-209ENST00000497564 LIFRP42702 1097 aa16.67■□□□□ 0.26
VPS26A-209ENST00000497564 GABPAQ06546 454 aa16.67■□□□□ 0.26
VPS26A-209ENST00000497564 TNFAIP1Q13829 316 aa16.67■□□□□ 0.26
VPS26A-209ENST00000497564 ME3Q16798 604 aa16.67■□□□□ 0.26
VPS26A-209ENST00000497564 CHST3Q7LGC8 479 aa16.67■□□□□ 0.26
VPS26A-209ENST00000497564 ARMC9Q7Z3E5 817 aa16.67■□□□□ 0.26
VPS26A-209ENST00000497564 SGMS1Q86VZ5 419 aa16.67■□□□□ 0.26
VPS26A-209ENST00000497564 IGDCC4Q8TDY8 1250 aa16.67■□□□□ 0.26
VPS26A-209ENST00000497564 ZNF274Q96GC6 653 aaPredicted RBP16.67■□□□□ 0.26
VPS26A-209ENST00000497564 CSRNP1Q96S65 589 aa16.67■□□□□ 0.26
VPS26A-209ENST00000497564 ATAD5Q96QE3 1844 aa16.67■□□□□ 0.26
VPS26A-209ENST00000497564 USP2O75604 605 aaPredicted RBP16.66■□□□□ 0.26
VPS26A-209ENST00000497564 HLA-DOAP06340 250 aa16.66■□□□□ 0.26
VPS26A-209ENST00000497564 HSP90AA1P07900 732 aaKnown RBP16.66■□□□□ 0.26
VPS26A-209ENST00000497564 DDIT3P35638 169 aa16.66■□□□□ 0.26
VPS26A-209ENST00000497564 SART3Q15020 963 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms