RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 GSG1L2A8MUP6 293 aa12.53□□□□□ -0.4
COL2A1-208ENST00000493991 SH2B2O14492 632 aaPredicted RBP12.53□□□□□ -0.4
COL2A1-208ENST00000493991 ATP1A3P13637 1013 aa12.53□□□□□ -0.4
COL2A1-208ENST00000493991 STIM1Q13586 685 aa12.53□□□□□ -0.4
COL2A1-208ENST00000493991 SEPT12Q8IYM1 358 aa12.53□□□□□ -0.4
COL2A1-208ENST00000493991 LZTFL1Q9NQ48 299 aa12.53□□□□□ -0.4
COL2A1-208ENST00000493991 UTYO14607 1347 aa12.53□□□□□ -0.4
COL2A1-208ENST00000493991 FAM205CA6NFA0 338 aa12.53□□□□□ -0.4
COL2A1-208ENST00000493991 AP5Z1O43299 807 aa12.53□□□□□ -0.4
COL2A1-208ENST00000493991 SF3B2Q13435 895 aaKnown RBP12.53□□□□□ -0.4
COL2A1-208ENST00000493991 ZMYM6O95789 1325 aa12.53□□□□□ -0.4
COL2A1-208ENST00000493991 USP42Q9H9J4 1324 aaKnown RBP12.53□□□□□ -0.4
COL2A1-208ENST00000493991 TERF1P54274 439 aa12.53□□□□□ -0.4
COL2A1-208ENST00000493991 ANTXR2P58335 489 aa12.53□□□□□ -0.4
COL2A1-208ENST00000493991 PPARDQ03181 441 aa12.53□□□□□ -0.4
COL2A1-208ENST00000493991 ERCC6LQ2NKX8 1250 aa12.53□□□□□ -0.4
COL2A1-208ENST00000493991 LINC00116Q8NCU8 138 aa12.53□□□□□ -0.4
COL2A1-208ENST00000493991 CACTINQ8WUQ7 758 aaKnown RBP12.53□□□□□ -0.4
COL2A1-208ENST00000493991 TRIM47Q96LD4 638 aa12.53□□□□□ -0.4
COL2A1-208ENST00000493991 MED23Q9ULK4 1368 aa12.52□□□□□ -0.4
COL2A1-208ENST00000493991 TXKP42681 527 aa12.52□□□□□ -0.4
COL2A1-208ENST00000493991 FANCCQ00597 558 aa12.52□□□□□ -0.4
COL2A1-208ENST00000493991 MCM6Q14566 821 aa12.52□□□□□ -0.4
COL2A1-208ENST00000493991 RILPL1Q5EBL4 403 aa12.52□□□□□ -0.4
COL2A1-208ENST00000493991 MB21D2Q8IYB1 491 aaPredicted RBP12.52□□□□□ -0.4
COL2A1-208ENST00000493991 PNMA1Q8ND90 353 aa12.52□□□□□ -0.4
COL2A1-208ENST00000493991 CCDC102AQ96A19 550 aa12.52□□□□□ -0.4
COL2A1-208ENST00000493991 DEF6Q9H4E7 631 aa12.52□□□□□ -0.4
COL2A1-208ENST00000493991 DBNDD1Q9H9R9 158 aa12.52□□□□□ -0.4
COL2A1-208ENST00000493991 FANCLQ9NW38 375 aa12.52□□□□□ -0.4
COL2A1-208ENST00000493991 RCOR1Q9UKL0 485 aa12.52□□□□□ -0.4
COL2A1-208ENST00000493991 TTF2Q9UNY4 1162 aaKnown RBP12.52□□□□□ -0.4
COL2A1-208ENST00000493991 FOXN1O15353 648 aa12.52□□□□□ -0.41
COL2A1-208ENST00000493991 LMAN1P49257 510 aa12.52□□□□□ -0.41
COL2A1-208ENST00000493991 ASIC1P78348 528 aa12.52□□□□□ -0.41
COL2A1-208ENST00000493991 TRIM28Q13263 835 aaKnown RBP12.52□□□□□ -0.41
COL2A1-208ENST00000493991 NFIXQ14938 502 aa12.52□□□□□ -0.41
COL2A1-208ENST00000493991 INF2Q27J81 1249 aa12.52□□□□□ -0.41
COL2A1-208ENST00000493991 NOM1Q5C9Z4 860 aaKnown RBP12.52□□□□□ -0.41
COL2A1-208ENST00000493991 TTC38Q5R3I4 469 aa12.52□□□□□ -0.41
COL2A1-208ENST00000493991 PAXIP1Q6ZW49 1069 aaPredicted RBP12.52□□□□□ -0.41
COL2A1-208ENST00000493991 CAGE1Q8TC20 777 aa12.52□□□□□ -0.41
COL2A1-208ENST00000493991 KIAA1524Q8TCG1 905 aa12.52□□□□□ -0.41
COL2A1-208ENST00000493991 PKD2L1Q9P0L9 805 aa12.52□□□□□ -0.41
COL2A1-208ENST00000493991 ELP1O95163 1332 aa12.52□□□□□ -0.41
COL2A1-208ENST00000493991 GTPBP4Q9BZE4 634 aaKnown RBP12.52□□□□□ -0.41
COL2A1-208ENST00000493991 SERPINB2P05120 415 aa12.51□□□□□ -0.41
COL2A1-208ENST00000493991 FDPSP14324 419 aaKnown RBP12.51□□□□□ -0.41
COL2A1-208ENST00000493991 ADKP55263 362 aaKnown RBP12.51□□□□□ -0.41
COL2A1-208ENST00000493991 MYL5Q02045 173 aa12.51□□□□□ -0.41
COL2A1-208ENST00000493991 DMTNQ08495 405 aa12.51□□□□□ -0.41
COL2A1-208ENST00000493991 UBE4AQ14139 1066 aa12.51□□□□□ -0.41
COL2A1-208ENST00000493991 EPSTI1Q96J88 318 aa12.51□□□□□ -0.41
COL2A1-208ENST00000493991 FAM84BQ96KN1 310 aaPredicted RBP12.51□□□□□ -0.41
COL2A1-208ENST00000493991 CPDO75976 1380 aa12.51□□□□□ -0.41
COL2A1-208ENST00000493991 CAMTA2O94983 1202 aa12.51□□□□□ -0.41
COL2A1-208ENST00000493991 CSF1RP07333 972 aa12.51□□□□□ -0.41
COL2A1-208ENST00000493991 BTDP43251 543 aa12.51□□□□□ -0.41
COL2A1-208ENST00000493991 MTIF2P46199 727 aaKnown RBP12.51□□□□□ -0.41
COL2A1-208ENST00000493991 EXOSC10Q01780 885 aaKnown RBP12.51□□□□□ -0.41
COL2A1-208ENST00000493991 DPP8Q6V1X1 898 aaPredicted RBP12.51□□□□□ -0.41
COL2A1-208ENST00000493991 TXNRD3Q86VQ6 643 aa12.51□□□□□ -0.41
COL2A1-208ENST00000493991 CLEC10AQ8IUN9 316 aa12.51□□□□□ -0.41
COL2A1-208ENST00000493991 GPATCH11Q8N954 259 aa12.51□□□□□ -0.41
COL2A1-208ENST00000493991 DRC1Q96MC2 740 aa12.51□□□□□ -0.41
COL2A1-208ENST00000493991 TIGD1Q96MW7 591 aa12.51□□□□□ -0.41
COL2A1-208ENST00000493991 MMRN2Q9H8L6 949 aa12.51□□□□□ -0.41
COL2A1-208ENST00000493991 EPB41L4AQ9HCS5 686 aaPredicted RBP12.51□□□□□ -0.41
COL2A1-208ENST00000493991 BIN2Q9UBW5 565 aaPredicted RBP12.51□□□□□ -0.41
COL2A1-208ENST00000493991 FBXO3Q9UK99 471 aa12.51□□□□□ -0.41
COL2A1-208ENST00000493991 SLIT1O75093 1534 aa12.51□□□□□ -0.41
COL2A1-208ENST00000493991 HSP90B2PQ58FF3 399 aa12.51□□□□□ -0.41
COL2A1-208ENST00000493991 USP17L2Q6R6M4 530 aa12.51□□□□□ -0.41
COL2A1-208ENST00000493991 FCHSD1Q86WN1 690 aa12.51□□□□□ -0.41
COL2A1-208ENST00000493991 TMOD2Q9NZR1 351 aa12.51□□□□□ -0.41
COL2A1-208ENST00000493991 GSTO1P78417 241 aa12.5□□□□□ -0.41
COL2A1-208ENST00000493991 PTGDRQ13258 359 aa12.5□□□□□ -0.41
COL2A1-208ENST00000493991 KIF4BQ2VIQ3 1234 aa12.5□□□□□ -0.41
COL2A1-208ENST00000493991 FNBP4Q8N3X1 1017 aaPredicted RBP12.5□□□□□ -0.41
COL2A1-208ENST00000493991 EYA3Q99504 573 aa12.5□□□□□ -0.41
COL2A1-208ENST00000493991 FEZ1Q99689 392 aa12.5□□□□□ -0.41
COL2A1-208ENST00000493991 OGFRQ9NZT2 677 aa12.5□□□□□ -0.41
COL2A1-208ENST00000493991 COL15A1P39059 1388 aa12.5□□□□□ -0.41
COL2A1-208ENST00000493991 UBR1Q8IWV7 1749 aa12.5□□□□□ -0.41
COL2A1-208ENST00000493991 YEATS4O95619 227 aa12.5□□□□□ -0.41
COL2A1-208ENST00000493991 ARID4AP29374 1257 aaPredicted RBP12.5□□□□□ -0.41
COL2A1-208ENST00000493991 ARID5AQ03989 594 aa12.5□□□□□ -0.41
COL2A1-208ENST00000493991 INTS5Q6P9B9 1019 aaKnown RBP12.5□□□□□ -0.41
COL2A1-208ENST00000493991 DYMQ7RTS9 669 aa12.5□□□□□ -0.41
COL2A1-208ENST00000493991 WDR66Q8TBY9 1149 aa12.5□□□□□ -0.41
COL2A1-208ENST00000493991 ST7Q9NRC1 585 aa12.5□□□□□ -0.41
COL2A1-208ENST00000493991 CCNT1O60563 726 aaKnown RBP12.5□□□□□ -0.41
COL2A1-208ENST00000493991 SLU7O95391 586 aaKnown RBP12.5□□□□□ -0.41
COL2A1-208ENST00000493991 HLA-DOAP06340 250 aa12.5□□□□□ -0.41
COL2A1-208ENST00000493991 DTHD1Q6ZMT9 781 aa12.5□□□□□ -0.41
COL2A1-208ENST00000493991 ZNF34Q8IZ26 560 aa12.5□□□□□ -0.41
COL2A1-208ENST00000493991 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.5□□□□□ -0.41
COL2A1-208ENST00000493991 CSRNP2Q9H175 543 aa12.5□□□□□ -0.41
COL2A1-208ENST00000493991 TBC1D7Q9P0N9 293 aa12.5□□□□□ -0.41
COL2A1-208ENST00000493991 PAXBP1Q9Y5B6 917 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms