RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.11□□□□□ -0.47
TNFRSF9-203ENST00000492571 ARAP2Q8WZ64 1704 aa12.11□□□□□ -0.47
TNFRSF9-203ENST00000492571 HMGCRP04035 888 aa12.1□□□□□ -0.47
TNFRSF9-203ENST00000492571 FAM110CQ1W6H9 321 aa12.1□□□□□ -0.47
TNFRSF9-203ENST00000492571 ZFPM1Q8IX07 1006 aa12.1□□□□□ -0.47
TNFRSF9-203ENST00000492571 BBXQ8WY36 941 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF9-203ENST00000492571 TBC1D2Q9BYX2 928 aa12.1□□□□□ -0.47
TNFRSF9-203ENST00000492571 ABCF2Q9UG63 623 aa12.1□□□□□ -0.47
TNFRSF9-203ENST00000492571 RPTORQ8N122 1335 aa12.1□□□□□ -0.47
TNFRSF9-203ENST00000492571 SALL1Q9NSC2 1324 aa12.1□□□□□ -0.47
TNFRSF9-203ENST00000492571 SOX1O00570 391 aaPredicted RBP12.09□□□□□ -0.47
TNFRSF9-203ENST00000492571 ANP32CO43423 234 aa12.09□□□□□ -0.47
TNFRSF9-203ENST00000492571 PICALMQ13492 652 aa12.09□□□□□ -0.47
TNFRSF9-203ENST00000492571 CCAR1Q8IX12 1150 aaKnown RBP12.09□□□□□ -0.47
TNFRSF9-203ENST00000492571 PROCA1Q8NCQ7 364 aaPredicted RBP12.09□□□□□ -0.47
TNFRSF9-203ENST00000492571 GDF15Q99988 308 aa12.09□□□□□ -0.47
TNFRSF9-203ENST00000492571 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.09□□□□□ -0.47
TNFRSF9-203ENST00000492571 HCSTQ9UBK5 93 aa12.09□□□□□ -0.47
TNFRSF9-203ENST00000492571 CACNA1FO60840 1977 aa12.09□□□□□ -0.47
TNFRSF9-203ENST00000492571 CIAO1O76071 339 aa12.08□□□□□ -0.48
TNFRSF9-203ENST00000492571 PTPREP23469 700 aa12.08□□□□□ -0.48
TNFRSF9-203ENST00000492571 MAP3K10Q02779 954 aa12.08□□□□□ -0.48
TNFRSF9-203ENST00000492571 LRIT3Q3SXY7 679 aa12.08□□□□□ -0.48
TNFRSF9-203ENST00000492571 TDHQ8IZJ6 230 aa12.08□□□□□ -0.48
TNFRSF9-203ENST00000492571 ZDHHC16Q969W1 377 aa12.08□□□□□ -0.48
TNFRSF9-203ENST00000492571 UBE2OQ9C0C9 1292 aaKnown RBP12.08□□□□□ -0.48
TNFRSF9-203ENST00000492571 USP44Q9H0E7 712 aa12.08□□□□□ -0.48
TNFRSF9-203ENST00000492571 SIL1Q9H173 461 aa12.08□□□□□ -0.48
TNFRSF9-203ENST00000492571 C11orf49Q9H6J7 331 aa12.08□□□□□ -0.48
TNFRSF9-203ENST00000492571 AS3MTQ9HBK9 375 aa12.08□□□□□ -0.48
TNFRSF9-203ENST00000492571 ZMYND8Q9ULU4 1186 aaPredicted RBP12.08□□□□□ -0.48
TNFRSF9-203ENST00000492571 STXBP5LQ9Y2K9 1186 aa12.08□□□□□ -0.48
TNFRSF9-203ENST00000492571 LDHCP07864 332 aa12.07□□□□□ -0.48
TNFRSF9-203ENST00000492571 UBTFL1P0CB47 393 aaPredicted RBP12.07□□□□□ -0.48
TNFRSF9-203ENST00000492571 IL15P40933 162 aaPredicted RBP12.07□□□□□ -0.48
TNFRSF9-203ENST00000492571 SPP2Q13103 211 aa12.07□□□□□ -0.48
TNFRSF9-203ENST00000492571 MRPL50Q8N5N7 158 aaKnown RBP12.07□□□□□ -0.48
TNFRSF9-203ENST00000492571 ZNF280CQ8ND82 737 aa12.07□□□□□ -0.48
TNFRSF9-203ENST00000492571 KCTD12Q96CX2 325 aaKnown RBP12.07□□□□□ -0.48
TNFRSF9-203ENST00000492571 ZBED2Q9BTP6 218 aa12.07□□□□□ -0.48
TNFRSF9-203ENST00000492571 SLC4A5Q9BY07 1137 aa12.07□□□□□ -0.48
TNFRSF9-203ENST00000492571 OSBPL5Q9H0X9 879 aaPredicted RBP12.07□□□□□ -0.48
TNFRSF9-203ENST00000492571 A0A1B0GUL6 1792 aa12.06□□□□□ -0.48
TNFRSF9-203ENST00000492571 DDTLA6NHG4 134 aaPredicted RBP12.06□□□□□ -0.48
TNFRSF9-203ENST00000492571 MAP4K4O95819 1239 aaPredicted RBP12.06□□□□□ -0.48
TNFRSF9-203ENST00000492571 SYN1P17600 705 aa12.06□□□□□ -0.48
TNFRSF9-203ENST00000492571 BTDP43251 543 aa12.06□□□□□ -0.48
TNFRSF9-203ENST00000492571 IRX3P78415 501 aaPredicted RBP12.06□□□□□ -0.48
TNFRSF9-203ENST00000492571 GSTO1P78417 241 aa12.06□□□□□ -0.48
TNFRSF9-203ENST00000492571 CAMK2BQ13554 666 aa12.06□□□□□ -0.48
TNFRSF9-203ENST00000492571 CCDC102BQ68D86 513 aa12.06□□□□□ -0.48
TNFRSF9-203ENST00000492571 ERICH6Q7L0X2 663 aa12.06□□□□□ -0.48
TNFRSF9-203ENST00000492571 ATG9AQ7Z3C6 839 aa12.06□□□□□ -0.48
TNFRSF9-203ENST00000492571 TRMT44Q8IYL2 757 aaKnown RBP12.06□□□□□ -0.48
TNFRSF9-203ENST00000492571 DIS3LQ8TF46 1054 aaKnown RBP12.06□□□□□ -0.48
TNFRSF9-203ENST00000492571 NOL10Q9BSC4 688 aaKnown RBP12.06□□□□□ -0.48
TNFRSF9-203ENST00000492571 TMOD4Q9NZQ9 345 aa12.06□□□□□ -0.48
TNFRSF9-203ENST00000492571 PCDHGA10Q9Y5H3 936 aa12.06□□□□□ -0.48
TNFRSF9-203ENST00000492571 ZSWIM8A7E2V4 1837 aa12.06□□□□□ -0.48
TNFRSF9-203ENST00000492571 USP17L5A8MUK1 530 aa12.05□□□□□ -0.48
TNFRSF9-203ENST00000492571 MAGEA10P43363 369 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF9-203ENST00000492571 PHKA1P46020 1223 aa12.05□□□□□ -0.48
TNFRSF9-203ENST00000492571 RFX5P48382 616 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF9-203ENST00000492571 PDE3AQ14432 1141 aa12.05□□□□□ -0.48
TNFRSF9-203ENST00000492571 TREML2Q5T2D2 321 aa12.05□□□□□ -0.48
TNFRSF9-203ENST00000492571 SH3BP5LQ7L8J4 393 aa12.05□□□□□ -0.48
TNFRSF9-203ENST00000492571 FAM9BQ8IZU0 186 aa12.05□□□□□ -0.48
TNFRSF9-203ENST00000492571 NUDT12Q9BQG2 462 aa12.05□□□□□ -0.48
TNFRSF9-203ENST00000492571 CWC22Q9HCG8 908 aaKnown RBP12.05□□□□□ -0.48
TNFRSF9-203ENST00000492571 AKAP2Q9Y2D5 859 aa12.05□□□□□ -0.48
TNFRSF9-203ENST00000492571 GAKO14976 1311 aa12.05□□□□□ -0.48
TNFRSF9-203ENST00000492571 COL6A3P12111 3177 aa12.04□□□□□ -0.48
TNFRSF9-203ENST00000492571 BHMG1C9JSJ3 638 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF9-203ENST00000492571 CYP2B6P20813 491 aa12.04□□□□□ -0.48
TNFRSF9-203ENST00000492571 HMGCS2P54868 508 aa12.04□□□□□ -0.48
TNFRSF9-203ENST00000492571 MVPQ14764 893 aaKnown RBP12.04□□□□□ -0.48
TNFRSF9-203ENST00000492571 GORABQ5T7V8 394 aa12.04□□□□□ -0.48
TNFRSF9-203ENST00000492571 GPRC5AQ8NFJ5 357 aa12.04□□□□□ -0.48
TNFRSF9-203ENST00000492571 SOCS4Q8WXH5 440 aa12.04□□□□□ -0.48
TNFRSF9-203ENST00000492571 LBHD1Q9BQE6 289 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF9-203ENST00000492571 TRIM34Q9BYJ4 488 aa12.04□□□□□ -0.48
TNFRSF9-203ENST00000492571 ASCC2Q9H1I8 757 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF9-203ENST00000492571 OGDHLQ9ULD0 1010 aa12.04□□□□□ -0.48
TNFRSF9-203ENST00000492571 MROH7-TTC4A0A0A0MT08 1334 aa12.04□□□□□ -0.48
TNFRSF9-203ENST00000492571 LAMA3Q16787 3333 aa12.04□□□□□ -0.48
TNFRSF9-203ENST00000492571 ATRNL1Q5VV63 1379 aa12.04□□□□□ -0.48
TNFRSF9-203ENST00000492571 GPR75-ASB3A0A0A6YYF3 556 aa12.03□□□□□ -0.48
TNFRSF9-203ENST00000492571 XRCC5P13010 732 aaKnown RBP12.03□□□□□ -0.48
TNFRSF9-203ENST00000492571 Q7L0L9 218 aa12.03□□□□□ -0.48
TNFRSF9-203ENST00000492571 CCDC84Q86UT8 332 aaPredicted RBP12.03□□□□□ -0.48
TNFRSF9-203ENST00000492571 RTN4Q9NQC3 1192 aaKnown RBP12.03□□□□□ -0.48
TNFRSF9-203ENST00000492571 DDX4Q9NQI0 724 aaKnown RBP12.03□□□□□ -0.48
TNFRSF9-203ENST00000492571 MTMR10Q9NXD2 777 aa12.03□□□□□ -0.48
TNFRSF9-203ENST00000492571 HERC5Q9UII4 1024 aaKnown RBP12.03□□□□□ -0.48
TNFRSF9-203ENST00000492571 GJD2Q9UKL4 321 aa12.03□□□□□ -0.48
TNFRSF9-203ENST00000492571 PDS5AQ29RF7 1337 aaKnown RBP12.03□□□□□ -0.48
TNFRSF9-203ENST00000492571 AK9Q5TCS8 1911 aa12.03□□□□□ -0.48
TNFRSF9-203ENST00000492571 ASNSP08243 561 aa12.02□□□□□ -0.49
TNFRSF9-203ENST00000492571 ZKSCAN1P17029 563 aaPredicted RBP12.02□□□□□ -0.49
TNFRSF9-203ENST00000492571 MAPK4P31152 587 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms