RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 LDHCP07864 332 aa12.44□□□□□ -0.42
USP4-214ENST00000491791 CHRNA5P30532 468 aa12.44□□□□□ -0.42
USP4-214ENST00000491791 STK38Q15208 465 aa12.44□□□□□ -0.42
USP4-214ENST00000491791 PTPAQ15257 358 aa12.44□□□□□ -0.42
USP4-214ENST00000491791 CCDC178Q5BJE1 867 aa12.44□□□□□ -0.42
USP4-214ENST00000491791 TXNRD3Q86VQ6 643 aa12.44□□□□□ -0.42
USP4-214ENST00000491791 TRIM22Q8IYM9 498 aa12.44□□□□□ -0.42
USP4-214ENST00000491791 JMYQ8N9B5 988 aa12.44□□□□□ -0.42
USP4-214ENST00000491791 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.44□□□□□ -0.42
USP4-214ENST00000491791 GOLPH3LQ9H4A5 285 aa12.44□□□□□ -0.42
USP4-214ENST00000491791 ZKSCAN5Q9Y2L8 839 aa12.44□□□□□ -0.42
USP4-214ENST00000491791 TNKSO95271 1327 aa12.43□□□□□ -0.42
USP4-214ENST00000491791 ZC3H4Q9UPT8 1303 aaKnown RBP12.43□□□□□ -0.42
USP4-214ENST00000491791 USP17L12C9JPN9 530 aa12.43□□□□□ -0.42
USP4-214ENST00000491791 USP17L21D6R901 530 aa12.43□□□□□ -0.42
USP4-214ENST00000491791 PRPF3O43395 683 aaKnown RBP12.43□□□□□ -0.42
USP4-214ENST00000491791 KINO60870 393 aaKnown RBP12.43□□□□□ -0.42
USP4-214ENST00000491791 MMP1P03956 469 aa12.43□□□□□ -0.42
USP4-214ENST00000491791 GUCY1B3Q02153 619 aa12.43□□□□□ -0.42
USP4-214ENST00000491791 TROAPQ12815 778 aa12.43□□□□□ -0.42
USP4-214ENST00000491791 TRIM29Q14134 588 aa12.43□□□□□ -0.42
USP4-214ENST00000491791 OTUD7BQ6GQQ9 843 aa12.43□□□□□ -0.42
USP4-214ENST00000491791 SASS6Q6UVJ0 657 aa12.43□□□□□ -0.42
USP4-214ENST00000491791 IQCA1Q86XH1 822 aa12.43□□□□□ -0.42
USP4-214ENST00000491791 FAM177A1Q8N128 213 aaPredicted RBP12.43□□□□□ -0.42
USP4-214ENST00000491791 ENAHQ8N8S7 591 aaPredicted RBP12.43□□□□□ -0.42
USP4-214ENST00000491791 TCP11L1Q9NUJ3 509 aa12.43□□□□□ -0.42
USP4-214ENST00000491791 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.43□□□□□ -0.42
USP4-214ENST00000491791 HPSEQ9Y251 543 aa12.43□□□□□ -0.42
USP4-214ENST00000491791 CLIC4Q9Y696 253 aa12.43□□□□□ -0.42
USP4-214ENST00000491791 FAM205AQ6ZU69 1335 aa12.42□□□□□ -0.42
USP4-214ENST00000491791 MINDY4BA8MYZ0 360 aa12.42□□□□□ -0.42
USP4-214ENST00000491791 POLR3DP05423 398 aaPredicted RBP12.42□□□□□ -0.42
USP4-214ENST00000491791 LDHBP07195 334 aaKnown RBP12.42□□□□□ -0.42
USP4-214ENST00000491791 PRDX5P30044 214 aa12.42□□□□□ -0.42
USP4-214ENST00000491791 ME1P48163 572 aa12.42□□□□□ -0.42
USP4-214ENST00000491791 C12orf60Q5U649 245 aa12.42□□□□□ -0.42
USP4-214ENST00000491791 SARM1Q6SZW1 724 aa12.42□□□□□ -0.42
USP4-214ENST00000491791 NOSTRINQ8IVI9 506 aa12.42□□□□□ -0.42
USP4-214ENST00000491791 SP8Q8IXZ3 490 aa12.42□□□□□ -0.42
USP4-214ENST00000491791 DNAJC5GQ8N7S2 189 aa12.42□□□□□ -0.42
USP4-214ENST00000491791 FSIP1Q8NA03 581 aa12.42□□□□□ -0.42
USP4-214ENST00000491791 RPGRQ92834 1020 aaKnown RBP12.42□□□□□ -0.42
USP4-214ENST00000491791 PHKBQ93100 1093 aa12.42□□□□□ -0.42
USP4-214ENST00000491791 NOL10Q9BSC4 688 aaKnown RBP12.42□□□□□ -0.42
USP4-214ENST00000491791 FTOQ9C0B1 505 aaKnown RBP eCLIP12.42□□□□□ -0.42
USP4-214ENST00000491791 SUGT1Q9Y2Z0 365 aa12.42□□□□□ -0.42
USP4-214ENST00000491791 BAZ2AQ9UIF9 1905 aaKnown RBP12.41□□□□□ -0.42
USP4-214ENST00000491791 ADCY5O95622 1261 aa12.41□□□□□ -0.42
USP4-214ENST00000491791 BAG3O95817 575 aa12.41□□□□□ -0.42
USP4-214ENST00000491791 LMNB1P20700 586 aa12.41□□□□□ -0.42
USP4-214ENST00000491791 GPSM2P81274 684 aa12.41□□□□□ -0.42
USP4-214ENST00000491791 PDE4BQ07343 736 aa12.41□□□□□ -0.42
USP4-214ENST00000491791 SAFBQ15424 915 aaKnown RBP eCLIP12.41□□□□□ -0.42
USP4-214ENST00000491791 CAMK4Q16566 473 aa12.41□□□□□ -0.42
USP4-214ENST00000491791 STX1AQ16623 288 aa12.41□□□□□ -0.42
USP4-214ENST00000491791 ANO6Q4KMQ2 910 aa12.41□□□□□ -0.42
USP4-214ENST00000491791 RILPL1Q5EBL4 403 aa12.41□□□□□ -0.42
USP4-214ENST00000491791 RRP12Q5JTH9 1297 aaKnown RBP12.41□□□□□ -0.42
USP4-214ENST00000491791 CATIPQ7Z7H3 387 aa12.41□□□□□ -0.42
USP4-214ENST00000491791 DGKHQ86XP1 1220 aa12.41□□□□□ -0.42
USP4-214ENST00000491791 TTLL6Q8N841 843 aa12.41□□□□□ -0.42
USP4-214ENST00000491791 ZNF579Q8NAF0 562 aaKnown RBP12.41□□□□□ -0.42
USP4-214ENST00000491791 SMC1BQ8NDV3 1235 aa12.41□□□□□ -0.42
USP4-214ENST00000491791 TBC1D22AQ8WUA7 517 aa12.41□□□□□ -0.42
USP4-214ENST00000491791 AIFM3Q96NN9 605 aa12.41□□□□□ -0.42
USP4-214ENST00000491791 BPIFA3Q9BQP9 254 aa12.41□□□□□ -0.42
USP4-214ENST00000491791 SLC26A6Q9BXS9 759 aa12.41□□□□□ -0.42
USP4-214ENST00000491791 RRAGCQ9HB90 399 aa12.41□□□□□ -0.42
USP4-214ENST00000491791 CBX8Q9HC52 389 aa12.41□□□□□ -0.42
USP4-214ENST00000491791 CD209Q9NNX6 404 aa12.41□□□□□ -0.42
USP4-214ENST00000491791 ANO10Q9NW15 660 aa12.41□□□□□ -0.42
USP4-214ENST00000491791 ANKIB1Q9P2G1 1089 aa12.41□□□□□ -0.42
USP4-214ENST00000491791 MROH7-TTC4A0A0A0MT08 1334 aa12.4□□□□□ -0.42
USP4-214ENST00000491791 DDX60LQ5H9U9 1706 aaKnown RBP12.4□□□□□ -0.42
USP4-214ENST00000491791 GPR75-ASB3A0A0A6YYF3 556 aa12.4□□□□□ -0.42
USP4-214ENST00000491791 H0YIN7 160 aa12.4□□□□□ -0.42
USP4-214ENST00000491791 CUTAO60888 179 aa12.4□□□□□ -0.42
USP4-214ENST00000491791 IQCB1Q15051 598 aa12.4□□□□□ -0.42
USP4-214ENST00000491791 SF3A1Q15459 793 aaKnown RBP12.4□□□□□ -0.42
USP4-214ENST00000491791 IFIT1BQ5T764 474 aaKnown RBP12.4□□□□□ -0.42
USP4-214ENST00000491791 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.4□□□□□ -0.42
USP4-214ENST00000491791 DZIP1Q86YF9 867 aaKnown RBP12.4□□□□□ -0.42
USP4-214ENST00000491791 RAB11FIP4Q86YS3 637 aa12.4□□□□□ -0.42
USP4-214ENST00000491791 CKAP2LQ8IYA6 745 aa12.4□□□□□ -0.42
USP4-214ENST00000491791 KLRG1Q96E93 195 aa12.4□□□□□ -0.42
USP4-214ENST00000491791 MYL10Q9BUA6 226 aa12.4□□□□□ -0.42
USP4-214ENST00000491791 GJB4Q9NTQ9 266 aa12.4□□□□□ -0.42
USP4-214ENST00000491791 AATFQ9NY61 560 aaKnown RBP eCLIP12.4□□□□□ -0.42
USP4-214ENST00000491791 GGA1Q9UJY5 639 aa12.4□□□□□ -0.42
USP4-214ENST00000491791 MYH2Q9UKX2 1941 aa12.4□□□□□ -0.42
USP4-214ENST00000491791 GAKO14976 1311 aa12.39□□□□□ -0.43
USP4-214ENST00000491791 WDHD1O75717 1129 aaPredicted RBP12.39□□□□□ -0.43
USP4-214ENST00000491791 PLCG2P16885 1265 aa12.39□□□□□ -0.43
USP4-214ENST00000491791 XBP1P17861 261 aa12.39□□□□□ -0.43
USP4-214ENST00000491791 RXRAP19793 462 aa12.39□□□□□ -0.43
USP4-214ENST00000491791 MSNP26038 577 aaKnown RBP12.39□□□□□ -0.43
USP4-214ENST00000491791 CDC25BP30305 580 aa12.39□□□□□ -0.43
USP4-214ENST00000491791 ZNF165P49910 485 aa12.39□□□□□ -0.43
USP4-214ENST00000491791 NDUFA8P51970 172 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms