RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 SH2B2O14492 632 aaPredicted RBP18.87■□□□□ 0.61
CLDN11-208ENST00000488989 EVCP57679 992 aa18.87■□□□□ 0.61
CLDN11-208ENST00000488989 Q6ZUG5 572 aa18.87■□□□□ 0.61
CLDN11-208ENST00000488989 CHST3Q7LGC8 479 aa18.87■□□□□ 0.61
CLDN11-208ENST00000488989 RRAGCQ9HB90 399 aa18.87■□□□□ 0.61
CLDN11-208ENST00000488989 SCAF8Q9UPN6 1271 aaKnown RBP18.87■□□□□ 0.61
CLDN11-208ENST00000488989 TSPY2A6NKD2 308 aa18.86■□□□□ 0.61
CLDN11-208ENST00000488989 SLURP2P0DP57 97 aa18.86■□□□□ 0.61
CLDN11-208ENST00000488989 LIFRP42702 1097 aa18.86■□□□□ 0.61
CLDN11-208ENST00000488989 NOVP48745 357 aa18.86■□□□□ 0.61
CLDN11-208ENST00000488989 TFAP4Q01664 338 aa18.86■□□□□ 0.61
CLDN11-208ENST00000488989 SEC23AQ15436 765 aa18.86■□□□□ 0.61
CLDN11-208ENST00000488989 FAM47AQ5JRC9 791 aa18.86■□□□□ 0.61
CLDN11-208ENST00000488989 IQCA1Q86XH1 822 aa18.86■□□□□ 0.61
CLDN11-208ENST00000488989 HOOK2Q96ED9 719 aa18.86■□□□□ 0.61
CLDN11-208ENST00000488989 TRIM34Q9BYJ4 488 aa18.86■□□□□ 0.61
CLDN11-208ENST00000488989 LRRC2Q9BYS8 371 aa18.86■□□□□ 0.61
CLDN11-208ENST00000488989 TBC1D2Q9BYX2 928 aa18.86■□□□□ 0.61
CLDN11-208ENST00000488989 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.86■□□□□ 0.61
CLDN11-208ENST00000488989 MYH4Q9Y623 1939 aa18.85■□□□□ 0.61
CLDN11-208ENST00000488989 IGKV6D-41A0A0C4DH26 115 aa18.85■□□□□ 0.61
CLDN11-208ENST00000488989 FAM196BA6NMK8 535 aa18.85■□□□□ 0.61
CLDN11-208ENST00000488989 SART3Q15020 963 aaKnown RBP18.85■□□□□ 0.61
CLDN11-208ENST00000488989 CCDC178Q5BJE1 867 aa18.85■□□□□ 0.61
CLDN11-208ENST00000488989 NBPF12Q5TAG4 269 aaPredicted RBP18.85■□□□□ 0.61
CLDN11-208ENST00000488989 SGMS1Q86VZ5 419 aa18.85■□□□□ 0.61
CLDN11-208ENST00000488989 SULF1Q8IWU6 871 aa18.85■□□□□ 0.61
CLDN11-208ENST00000488989 ANKS1AQ92625 1134 aa18.85■□□□□ 0.61
CLDN11-208ENST00000488989 ZSCAN10Q96SZ4 725 aaPredicted RBP18.85■□□□□ 0.61
CLDN11-208ENST00000488989 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.85■□□□□ 0.61
CLDN11-208ENST00000488989 ANGEL1Q9UNK9 670 aaKnown RBP18.85■□□□□ 0.61
CLDN11-208ENST00000488989 SSC5DA1L4H1 1573 aa18.85■□□□□ 0.61
CLDN11-208ENST00000488989 IFIT3O14879 490 aaKnown RBP18.84■□□□□ 0.61
CLDN11-208ENST00000488989 TSPY3P0CV98 308 aa18.84■□□□□ 0.61
CLDN11-208ENST00000488989 TSPY8P0CW00 308 aa18.84■□□□□ 0.61
CLDN11-208ENST00000488989 AKR1B1P15121 316 aa18.84■□□□□ 0.61
CLDN11-208ENST00000488989 BECN1Q14457 450 aa18.84■□□□□ 0.61
CLDN11-208ENST00000488989 CERKLQ49MI3 558 aaPredicted RBP18.84■□□□□ 0.61
CLDN11-208ENST00000488989 EAPPQ56P03 285 aaPredicted RBP18.84■□□□□ 0.61
CLDN11-208ENST00000488989 HSCBQ8IWL3 235 aa18.84■□□□□ 0.61
CLDN11-208ENST00000488989 BRF1Q92994 677 aa18.84■□□□□ 0.61
CLDN11-208ENST00000488989 UBAC1Q9BSL1 405 aa18.84■□□□□ 0.61
CLDN11-208ENST00000488989 LY9Q9HBG7 655 aa18.84■□□□□ 0.61
CLDN11-208ENST00000488989 IL17RBQ9NRM6 502 aa18.84■□□□□ 0.61
CLDN11-208ENST00000488989 LIMCH1Q9UPQ0 1083 aa18.84■□□□□ 0.61
CLDN11-208ENST00000488989 PAPPA2Q9BXP8 1791 aa18.83■□□□□ 0.61
CLDN11-208ENST00000488989 TNKSO95271 1327 aa18.83■□□□□ 0.61
CLDN11-208ENST00000488989 K7ELQ4 463 aaPredicted RBP18.83■□□□□ 0.6
CLDN11-208ENST00000488989 RRP1BQ14684 758 aaKnown RBP18.83■□□□□ 0.6
CLDN11-208ENST00000488989 SUPT20HL1Q3ZLR7 823 aa18.83■□□□□ 0.6
CLDN11-208ENST00000488989 TMEM67Q5HYA8 995 aa18.83■□□□□ 0.6
CLDN11-208ENST00000488989 DCAF15Q66K64 600 aa18.83■□□□□ 0.6
CLDN11-208ENST00000488989 KRT26Q7Z3Y9 468 aa18.83■□□□□ 0.6
CLDN11-208ENST00000488989 DGKHQ86XP1 1220 aa18.83■□□□□ 0.6
CLDN11-208ENST00000488989 TMTC2Q8N394 836 aa18.83■□□□□ 0.6
CLDN11-208ENST00000488989 ENAHQ8N8S7 591 aaPredicted RBP18.83■□□□□ 0.6
CLDN11-208ENST00000488989 ZSCAN31Q96LW9 406 aaPredicted RBP18.83■□□□□ 0.6
CLDN11-208ENST00000488989 NMRK2Q9NPI5 230 aa18.83■□□□□ 0.6
CLDN11-208ENST00000488989 GPHNQ9NQX3 736 aaPredicted RBP18.83■□□□□ 0.6
CLDN11-208ENST00000488989 DOCK1Q14185 1865 aa18.83■□□□□ 0.6
CLDN11-208ENST00000488989 ERICH2A1L162 156 aa18.82■□□□□ 0.6
CLDN11-208ENST00000488989 PHF20L1A8MW92 1017 aa18.82■□□□□ 0.6
CLDN11-208ENST00000488989 ADM5C9JUS6 153 aa18.82■□□□□ 0.6
CLDN11-208ENST00000488989 FGD1P98174 961 aa18.82■□□□□ 0.6
CLDN11-208ENST00000488989 WTAPQ15007 396 aa18.82■□□□□ 0.6
CLDN11-208ENST00000488989 RCSD1Q6JBY9 416 aa18.82■□□□□ 0.6
CLDN11-208ENST00000488989 CDC37L1Q7L3B6 337 aa18.82■□□□□ 0.6
CLDN11-208ENST00000488989 LDHDQ86WU2 507 aa18.82■□□□□ 0.6
CLDN11-208ENST00000488989 ZKSCAN3Q9BRR0 538 aa18.82■□□□□ 0.6
CLDN11-208ENST00000488989 ZNF112Q9UJU3 913 aa18.82■□□□□ 0.6
CLDN11-208ENST00000488989 TPCN1Q9ULQ1 816 aa18.82■□□□□ 0.6
CLDN11-208ENST00000488989 POTEIP0CG38 1075 aa18.81■□□□□ 0.6
CLDN11-208ENST00000488989 POTEJP0CG39 1038 aa18.81■□□□□ 0.6
CLDN11-208ENST00000488989 TMEM179Q6ZVK1 233 aa18.81■□□□□ 0.6
CLDN11-208ENST00000488989 MIGA2Q7L4E1 593 aa18.81■□□□□ 0.6
CLDN11-208ENST00000488989 ZNF274Q96GC6 653 aaPredicted RBP18.81■□□□□ 0.6
CLDN11-208ENST00000488989 TMX3Q96JJ7 454 aa18.81■□□□□ 0.6
CLDN11-208ENST00000488989 ZNF341Q9BYN7 854 aa18.81■□□□□ 0.6
CLDN11-208ENST00000488989 SH2B1Q9NRF2 756 aaPredicted RBP18.81■□□□□ 0.6
CLDN11-208ENST00000488989 GINM1Q9NU53 330 aa18.81■□□□□ 0.6
CLDN11-208ENST00000488989 NMT2O60551 498 aa18.8■□□□□ 0.6
CLDN11-208ENST00000488989 GUCY1A2P33402 732 aa18.8■□□□□ 0.6
CLDN11-208ENST00000488989 CAP2P40123 477 aa18.8■□□□□ 0.6
CLDN11-208ENST00000488989 APOBRQ0VD83 1088 aa18.8■□□□□ 0.6
CLDN11-208ENST00000488989 ABCB5Q2M3G0 1257 aa18.8■□□□□ 0.6
CLDN11-208ENST00000488989 PPP4R3BQ5MIZ7 849 aa18.8■□□□□ 0.6
CLDN11-208ENST00000488989 PRAMEF18Q5VWM3 479 aa18.8■□□□□ 0.6
CLDN11-208ENST00000488989 USP48Q86UV5 1035 aa18.8■□□□□ 0.6
CLDN11-208ENST00000488989 CEP95Q96GE4 821 aa18.8■□□□□ 0.6
CLDN11-208ENST00000488989 SENP2Q9HC62 589 aa18.8■□□□□ 0.6
CLDN11-208ENST00000488989 MTMR4Q9NYA4 1195 aa18.8■□□□□ 0.6
CLDN11-208ENST00000488989 BRPF3Q9ULD4 1205 aa18.8■□□□□ 0.6
CLDN11-208ENST00000488989 NID2Q14112 1375 aa18.8■□□□□ 0.6
CLDN11-208ENST00000488989 OTOFQ9HC10 1997 aa18.79■□□□□ 0.6
CLDN11-208ENST00000488989 RCAN1P53805 252 aa18.79■□□□□ 0.6
CLDN11-208ENST00000488989 JAG1P78504 1218 aa18.79■□□□□ 0.6
CLDN11-208ENST00000488989 CUL4AQ13619 759 aa18.79■□□□□ 0.6
CLDN11-208ENST00000488989 ME3Q16798 604 aa18.79■□□□□ 0.6
CLDN11-208ENST00000488989 IFIT1BQ5T764 474 aaKnown RBP18.79■□□□□ 0.6
CLDN11-208ENST00000488989 CDCA5Q96FF9 252 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms