RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 INCENPQ9NQS7 918 aa8.92□□□□□ -0.98
APOBEC3A-203ENST00000488758 ZNF70Q9UC06 446 aaPredicted RBP8.92□□□□□ -0.98
APOBEC3A-203ENST00000488758 LIMCH1Q9UPQ0 1083 aa8.92□□□□□ -0.98
APOBEC3A-203ENST00000488758 DICER1Q9UPY3 1922 aaKnown RBP8.92□□□□□ -0.98
APOBEC3A-203ENST00000488758 ZNF646O15015 1829 aaPredicted RBP8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 CLRN2A0PK11 232 aa8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 ERICH2A1L162 156 aa8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 POTEMA6NI47 508 aa8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 PRC1O43663 620 aa8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 GTPBP6O43824 516 aaPredicted RBP8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 RANBP6O60518 1105 aaKnown RBP8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 KDM4AO75164 1064 aa8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 ENTPD3O75355 529 aa8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 DDNO94850 711 aaPredicted RBP8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 CD2BP2O95400 341 aaKnown RBP8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 LMOD1P29536 600 aaPredicted RBP8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 NT5C2P49902 561 aa8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 PLCD1P51178 756 aa8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 CACNB3P54284 484 aa8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 TCP10Q12799 353 aa8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 NFIAQ12857 509 aa8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 SART3Q15020 963 aaKnown RBP8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 CHST3Q7LGC8 479 aa8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 MB21D2Q8IYB1 491 aaPredicted RBP8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 ZNF444Q8N0Y2 327 aaPredicted RBP8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 TMEM87BQ96K49 555 aa8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 LARP6Q9BRS8 491 aaKnown RBP8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 DHX36Q9H2U1 1008 aaKnown RBP8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 VEZTQ9HBM0 779 aa8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 DDX4Q9NQI0 724 aaKnown RBP8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 ZSWIM5Q9P217 1185 aa8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 SBF1O95248 1867 aa8.91□□□□□ -0.98
APOBEC3A-203ENST00000488758 NEDD4P46934 1319 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 WDR19Q8NEZ3 1342 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 SHTN1A0MZ66 631 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 TSPY2A6NKD2 308 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 TCP10L2B9ZVM9 353 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 WNT10BO00744 389 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 ORC4O43929 436 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 FGRP09769 529 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 TNNI2P48788 182 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 HTRA3P83110 453 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 KIF4BQ2VIQ3 1234 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 NBPF9Q3BBW0 867 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 TBC1D10BQ4KMP7 808 aaPredicted RBP8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 COL13A1Q5TAT6 717 aaPredicted RBP8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 POTEGQ6S5H5 508 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 CYB5R4Q7L1T6 521 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 SAMD7Q7Z3H4 446 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 CRACR2BQ8N4Y2 399 aaPredicted RBP8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 DNAJC5GQ8N7S2 189 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 SPRYD3Q8NCJ5 442 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 FAM151AQ8WW52 585 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 DYNLL2Q96FJ2 89 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 TMX3Q96JJ7 454 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 UBAC1Q9BSL1 405 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 TRIM34Q9BYJ4 488 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 LRRC2Q9BYS8 371 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 GPRC5DQ9NZD1 345 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 PI4KBQ9UBF8 816 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 FAM198AQ9UFP1 575 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 TACC3Q9Y6A5 838 aa8.9□□□□□ -0.98
APOBEC3A-203ENST00000488758 MYH1P12882 1939 aa8.9□□□□□ -0.99
APOBEC3A-203ENST00000488758 NAV1Q8NEY1 1877 aa8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 LAMA4Q16363 1823 aa8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 ADAMTSL1Q8N6G6 1762 aa8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 SMIM22K7EJ46 135 aa8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 IFIT3O14879 490 aaKnown RBP8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 PRDM1O75626 825 aa8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 HOXB3P14651 431 aaPredicted RBP8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 CDK8P49336 464 aa8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 APLP1P51693 650 aa8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 TFAP4Q01664 338 aa8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 COL9A3Q14050 684 aaPredicted RBP8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 CCDC178Q5BJE1 867 aa8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 TMEM67Q5HYA8 995 aa8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 FKBP1CQ5VVH2 108 aa8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 NFXL1Q6ZNB6 911 aa8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 C16orf86Q6ZW13 317 aa8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 IQCA1Q86XH1 822 aa8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 FOXP4Q8IVH2 680 aaPredicted RBP8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 ZFPM1Q8IX07 1006 aa8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 TMTC2Q8N394 836 aa8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 BRF1Q92994 677 aa8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 ZBED3Q96IU2 234 aaPredicted RBP8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 MTA3Q9BTC8 594 aa8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 SH2B1Q9NRF2 756 aaPredicted RBP8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 SWAP70Q9UH65 585 aa8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 SERPINB13Q9UIV8 391 aa8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 NAP1L2Q9ULW6 460 aaPredicted RBP8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 CDK5RAP2Q96SN8 1893 aa8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 ECM29Q5VYK3 1845 aa8.89□□□□□ -0.99
APOBEC3A-203ENST00000488758 ZC3H4Q9UPT8 1303 aaKnown RBP8.88□□□□□ -0.99
APOBEC3A-203ENST00000488758 C2orf72A6NCS6 295 aa8.88□□□□□ -0.99
APOBEC3A-203ENST00000488758 TSPY3P0CV98 308 aa8.88□□□□□ -0.99
APOBEC3A-203ENST00000488758 TSPY8P0CW00 308 aa8.88□□□□□ -0.99
APOBEC3A-203ENST00000488758 EPS15P42566 896 aa8.88□□□□□ -0.99
APOBEC3A-203ENST00000488758 ANTXR2P58335 489 aa8.88□□□□□ -0.99
APOBEC3A-203ENST00000488758 APOBRQ0VD83 1088 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms