RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 SPEM2Q0P670 501 aa8.37□□□□□ -1.07
SEC22C-215ENST00000487701 DGKZQ13574 1117 aa8.37□□□□□ -1.07
SEC22C-215ENST00000487701 NFIXQ14938 502 aa8.37□□□□□ -1.07
SEC22C-215ENST00000487701 PROSER3Q2NL68 480 aa8.37□□□□□ -1.07
SEC22C-215ENST00000487701 LRP10Q7Z4F1 713 aa8.37□□□□□ -1.07
SEC22C-215ENST00000487701 FCHSD1Q86WN1 690 aa8.37□□□□□ -1.07
SEC22C-215ENST00000487701 NLGN1Q8N2Q7 840 aa8.37□□□□□ -1.07
SEC22C-215ENST00000487701 SLC30A3Q99726 388 aa8.37□□□□□ -1.07
SEC22C-215ENST00000487701 KLF15Q9UIH9 416 aa8.37□□□□□ -1.07
SEC22C-215ENST00000487701 LAMB2P55268 1798 aa8.37□□□□□ -1.07
SEC22C-215ENST00000487701 PXDNLA1KZ92 1463 aa8.37□□□□□ -1.07
SEC22C-215ENST00000487701 TNRC6CQ9HCJ0 1690 aaKnown RBP8.37□□□□□ -1.07
SEC22C-215ENST00000487701 A0A087WZG4 1122 aa8.36□□□□□ -1.07
SEC22C-215ENST00000487701 TGFBR3LH3BV60 316 aa8.36□□□□□ -1.07
SEC22C-215ENST00000487701 POLRMTO00411 1230 aaKnown RBP8.36□□□□□ -1.07
SEC22C-215ENST00000487701 ANXA1P04083 346 aa8.36□□□□□ -1.07
SEC22C-215ENST00000487701 TM4SF1P30408 202 aa8.36□□□□□ -1.07
SEC22C-215ENST00000487701 GNAI1P63096 354 aa8.36□□□□□ -1.07
SEC22C-215ENST00000487701 CALD1Q05682 793 aaKnown RBP8.36□□□□□ -1.07
SEC22C-215ENST00000487701 FKBP5Q13451 457 aaPredicted RBP8.36□□□□□ -1.07
SEC22C-215ENST00000487701 TMEM164Q5U3C3 297 aa8.36□□□□□ -1.07
SEC22C-215ENST00000487701 TSR2Q969E8 191 aaKnown RBP8.36□□□□□ -1.07
SEC22C-215ENST00000487701 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.36□□□□□ -1.07
SEC22C-215ENST00000487701 MKL2Q9ULH7 1088 aa8.36□□□□□ -1.07
SEC22C-215ENST00000487701 CCDC88AQ3V6T2 1871 aa8.36□□□□□ -1.07
SEC22C-215ENST00000487701 CARMIL3Q8ND23 1372 aa8.35□□□□□ -1.07
SEC22C-215ENST00000487701 ZNF521Q96K83 1311 aa8.35□□□□□ -1.07
SEC22C-215ENST00000487701 EIF2S2P20042 333 aaKnown RBP8.35□□□□□ -1.07
SEC22C-215ENST00000487701 IER5Q5VY09 327 aa8.35□□□□□ -1.07
SEC22C-215ENST00000487701 DUSP27Q5VZP5 1158 aa8.35□□□□□ -1.07
SEC22C-215ENST00000487701 TBC1D9BQ66K14 1250 aa8.35□□□□□ -1.07
SEC22C-215ENST00000487701 TTLL7Q6ZT98 887 aa8.35□□□□□ -1.07
SEC22C-215ENST00000487701 BTBD6Q96KE9 485 aa8.35□□□□□ -1.07
SEC22C-215ENST00000487701 CD2APQ9Y5K6 639 aa8.35□□□□□ -1.07
SEC22C-215ENST00000487701 SBF1O95248 1867 aa8.34□□□□□ -1.07
SEC22C-215ENST00000487701 IL16Q14005 1332 aa8.34□□□□□ -1.07
SEC22C-215ENST00000487701 FANCIQ9NVI1 1328 aa8.34□□□□□ -1.07
SEC22C-215ENST00000487701 HOXB7P09629 217 aa8.34□□□□□ -1.07
SEC22C-215ENST00000487701 MYL6BP14649 208 aa8.34□□□□□ -1.07
SEC22C-215ENST00000487701 HLFQ16534 295 aa8.34□□□□□ -1.07
SEC22C-215ENST00000487701 CHSY3Q70JA7 882 aa8.34□□□□□ -1.07
SEC22C-215ENST00000487701 NGEFQ8N5V2 710 aa8.34□□□□□ -1.07
SEC22C-215ENST00000487701 TSPYL6Q8N831 410 aa8.34□□□□□ -1.07
SEC22C-215ENST00000487701 C8orf58Q8NAV2 365 aa8.34□□□□□ -1.07
SEC22C-215ENST00000487701 BHMTQ93088 406 aa8.34□□□□□ -1.07
SEC22C-215ENST00000487701 MKNK1Q9BUB5 465 aa8.34□□□□□ -1.07
SEC22C-215ENST00000487701 CHPF2Q9P2E5 772 aa8.34□□□□□ -1.07
SEC22C-215ENST00000487701 BCS1LQ9Y276 419 aa8.34□□□□□ -1.07
SEC22C-215ENST00000487701 DDX60Q8IY21 1712 aaKnown RBP8.34□□□□□ -1.07
SEC22C-215ENST00000487701 TAF1P21675 1872 aa8.34□□□□□ -1.07
SEC22C-215ENST00000487701 ELL2O00472 640 aaPredicted RBP8.33□□□□□ -1.08
SEC22C-215ENST00000487701 EPB42P16452 691 aa8.33□□□□□ -1.08
SEC22C-215ENST00000487701 ALAS2P22557 587 aa8.33□□□□□ -1.08
SEC22C-215ENST00000487701 IDH3AP50213 366 aa8.33□□□□□ -1.08
SEC22C-215ENST00000487701 OCLNQ16625 522 aa8.33□□□□□ -1.08
SEC22C-215ENST00000487701 ATP10DQ9P241 1426 aa8.33□□□□□ -1.08
SEC22C-215ENST00000487701 SLX4Q8IY92 1834 aa8.33□□□□□ -1.08
SEC22C-215ENST00000487701 MYH3P11055 1940 aa8.33□□□□□ -1.08
SEC22C-215ENST00000487701 MAP3K15Q6ZN16 1313 aa8.32□□□□□ -1.08
SEC22C-215ENST00000487701 ELOA3CA0A087WX78 387 aaPredicted RBP8.32□□□□□ -1.08
SEC22C-215ENST00000487701 ELOA3DA6NLF2 546 aaPredicted RBP8.32□□□□□ -1.08
SEC22C-215ENST00000487701 SIN3BO75182 1162 aa8.32□□□□□ -1.08
SEC22C-215ENST00000487701 SERPINB2P05120 415 aa8.32□□□□□ -1.08
SEC22C-215ENST00000487701 YBX3P16989 372 aaKnown RBP eCLIP8.32□□□□□ -1.089e-8■□□□□ 9.4
SEC22C-215ENST00000487701 TBC1D8BQ0IIM8 1120 aa8.32□□□□□ -1.08
SEC22C-215ENST00000487701 C11orf91Q3C1V1 193 aa8.32□□□□□ -1.08
SEC22C-215ENST00000487701 PLA2G4EQ3MJ16 856 aa8.32□□□□□ -1.08
SEC22C-215ENST00000487701 ELOA3BQ3SY89 546 aa8.32□□□□□ -1.08
SEC22C-215ENST00000487701 NPM2Q86SE8 214 aaKnown RBP8.32□□□□□ -1.08
SEC22C-215ENST00000487701 WDR63Q8IWG1 891 aa8.32□□□□□ -1.08
SEC22C-215ENST00000487701 ELOA3Q8NG57 546 aa8.32□□□□□ -1.08
SEC22C-215ENST00000487701 MYO19Q96H55 970 aa8.32□□□□□ -1.08
SEC22C-215ENST00000487701 PNMA5Q96PV4 448 aa8.32□□□□□ -1.08
SEC22C-215ENST00000487701 C1orf115Q9H7X2 142 aa8.32□□□□□ -1.08
SEC22C-215ENST00000487701 DDX21Q9NR30 783 aaKnown RBP eCLIP8.32□□□□□ -1.08
SEC22C-215ENST00000487701 FER1L6Q2WGJ9 1857 aa8.32□□□□□ -1.08
SEC22C-215ENST00000487701 ERVV-1B6SEH8 477 aa8.31□□□□□ -1.08
SEC22C-215ENST00000487701 ITGB2P05107 769 aa8.31□□□□□ -1.08
SEC22C-215ENST00000487701 DPEP1P16444 411 aa8.31□□□□□ -1.08
SEC22C-215ENST00000487701 KCNA3P22001 575 aa8.31□□□□□ -1.08
SEC22C-215ENST00000487701 PRR5LQ6MZQ0 368 aa8.31□□□□□ -1.08
SEC22C-215ENST00000487701 CLEC4GQ6UXB4 293 aa8.31□□□□□ -1.08
SEC22C-215ENST00000487701 KIF6Q6ZMV9 814 aa8.31□□□□□ -1.08
SEC22C-215ENST00000487701 COPS6Q7L5N1 327 aa8.31□□□□□ -1.08
SEC22C-215ENST00000487701 XAGE3Q8WTP9 111 aa8.31□□□□□ -1.08
SEC22C-215ENST00000487701 SETDB2Q96T68 719 aa8.31□□□□□ -1.08
SEC22C-215ENST00000487701 CXXC1Q9P0U4 656 aaPredicted RBP8.31□□□□□ -1.08
SEC22C-215ENST00000487701 WWC3Q9ULE0 1092 aa8.31□□□□□ -1.08
SEC22C-215ENST00000487701 ZNF652Q9Y2D9 606 aa8.31□□□□□ -1.08
SEC22C-215ENST00000487701 UBN2Q6ZU65 1347 aa8.3□□□□□ -1.08
SEC22C-215ENST00000487701 A0A0G2JLW4 131 aa8.3□□□□□ -1.08
SEC22C-215ENST00000487701 PIK3R2O00459 728 aa8.3□□□□□ -1.08
SEC22C-215ENST00000487701 CHRNA5P30532 468 aa8.3□□□□□ -1.08
SEC22C-215ENST00000487701 DGKGP49619 791 aa8.3□□□□□ -1.08
SEC22C-215ENST00000487701 TGFB2P61812 414 aa8.3□□□□□ -1.08
SEC22C-215ENST00000487701 EXOSC9Q06265 439 aaKnown RBP8.3□□□□□ -1.08
SEC22C-215ENST00000487701 AIMP1Q12904 312 aaKnown RBP8.3□□□□□ -1.08
SEC22C-215ENST00000487701 IFT43Q96FT9 208 aa8.3□□□□□ -1.08
SEC22C-215ENST00000487701 IGFLR1Q9H665 355 aa8.3□□□□□ -1.08
SEC22C-215ENST00000487701 DBF4Q9UBU7 674 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms