RNA–Protein interactions for RNA: ENST00000487699.1

SATB1-215, Transcript of SATB homeobox 1, humanhuman

TSL 4

Gene SATB1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-215ENST00000487699 TACC3Q9Y6A5 838 aa11.68□□□□□ -0.54
SATB1-215ENST00000487699 PATL2C9JE40 543 aaKnown RBP11.67□□□□□ -0.54
SATB1-215ENST00000487699 POLR3DP05423 398 aaPredicted RBP11.67□□□□□ -0.54
SATB1-215ENST00000487699 HLA-DOAP06340 250 aa11.67□□□□□ -0.54
SATB1-215ENST00000487699 CETPP11597 493 aa11.67□□□□□ -0.54
SATB1-215ENST00000487699 CRHR2Q13324 411 aa11.67□□□□□ -0.54
SATB1-215ENST00000487699 DGKZQ13574 1117 aa11.67□□□□□ -0.54
SATB1-215ENST00000487699 NOM1Q5C9Z4 860 aaKnown RBP11.67□□□□□ -0.54
SATB1-215ENST00000487699 VPS53Q5VIR6 699 aa11.67□□□□□ -0.54
SATB1-215ENST00000487699 GIMAP6Q6P9H5 292 aa11.67□□□□□ -0.54
SATB1-215ENST00000487699 SIAH1Q8IUQ4 282 aa11.67□□□□□ -0.54
SATB1-215ENST00000487699 WDR18Q9BV38 432 aa11.67□□□□□ -0.54
SATB1-215ENST00000487699 IL25Q9H293 177 aa11.67□□□□□ -0.54
SATB1-215ENST00000487699 ZBTB21Q9ULJ3 1066 aa11.67□□□□□ -0.54
SATB1-215ENST00000487699 DOCK1Q14185 1865 aa11.67□□□□□ -0.54
SATB1-215ENST00000487699 ADGRA2Q96PE1 1338 aa11.66□□□□□ -0.54
SATB1-215ENST00000487699 NAV1Q8NEY1 1877 aa11.66□□□□□ -0.54
SATB1-215ENST00000487699 USP17L5A8MUK1 530 aa11.66□□□□□ -0.54
SATB1-215ENST00000487699 GPR25O00155 361 aa11.66□□□□□ -0.54
SATB1-215ENST00000487699 GH2P01242 217 aa11.66□□□□□ -0.54
SATB1-215ENST00000487699 SDSP20132 328 aa11.66□□□□□ -0.54
SATB1-215ENST00000487699 SPP2Q13103 211 aa11.66□□□□□ -0.54
SATB1-215ENST00000487699 NMIQ13287 307 aaPredicted RBP11.66□□□□□ -0.54
SATB1-215ENST00000487699 SH3D19Q5HYK7 790 aa11.66□□□□□ -0.54
SATB1-215ENST00000487699 TTC22Q5TAA0 569 aa11.66□□□□□ -0.54
SATB1-215ENST00000487699 C16orf86Q6ZW13 317 aa11.66□□□□□ -0.54
SATB1-215ENST00000487699 ANKRD23Q86SG2 305 aa11.66□□□□□ -0.54
SATB1-215ENST00000487699 ZNF589Q86UQ0 364 aaPredicted RBP11.66□□□□□ -0.54
SATB1-215ENST00000487699 IFNL3Q8IZI9 196 aa11.66□□□□□ -0.54
SATB1-215ENST00000487699 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.66□□□□□ -0.54
SATB1-215ENST00000487699 PICK1Q9NRD5 415 aa11.66□□□□□ -0.54
SATB1-215ENST00000487699 HELLSQ9NRZ9 838 aa11.66□□□□□ -0.54
SATB1-215ENST00000487699 TRIM75PA6NK02 468 aa11.65□□□□□ -0.54
SATB1-215ENST00000487699 ALDH1A1P00352 501 aa11.65□□□□□ -0.54
SATB1-215ENST00000487699 ASNSP08243 561 aa11.65□□□□□ -0.54
SATB1-215ENST00000487699 CDK8P49336 464 aa11.65□□□□□ -0.54
SATB1-215ENST00000487699 CERKLQ49MI3 558 aaPredicted RBP11.65□□□□□ -0.54
SATB1-215ENST00000487699 CRACR2BQ8N4Y2 399 aaPredicted RBP11.65□□□□□ -0.54
SATB1-215ENST00000487699 ZNF280CQ8ND82 737 aa11.65□□□□□ -0.54
SATB1-215ENST00000487699 ZNF296Q8WUU4 475 aaPredicted RBP11.65□□□□□ -0.54
SATB1-215ENST00000487699 RILPL2Q969X0 211 aa11.65□□□□□ -0.54
SATB1-215ENST00000487699 ZCCHC17Q9NP64 241 aaKnown RBP11.65□□□□□ -0.54
SATB1-215ENST00000487699 GINM1Q9NU53 330 aa11.65□□□□□ -0.54
SATB1-215ENST00000487699 ROBO3Q96MS0 1386 aa11.65□□□□□ -0.55
SATB1-215ENST00000487699 BAZ2AQ9UIF9 1905 aaKnown RBP11.64□□□□□ -0.55
SATB1-215ENST00000487699 A0A1W2PRG0 241 aa11.64□□□□□ -0.55
SATB1-215ENST00000487699 TRIM6-TRIM34B2RNG4 842 aa11.64□□□□□ -0.55
SATB1-215ENST00000487699 AKR1B1P15121 316 aa11.64□□□□□ -0.55
SATB1-215ENST00000487699 GNAT2P19087 354 aa11.64□□□□□ -0.55
SATB1-215ENST00000487699 SEPT2Q15019 361 aa11.64□□□□□ -0.55
SATB1-215ENST00000487699 LRRFIP1Q32MZ4 808 aaKnown RBP11.64□□□□□ -0.55
SATB1-215ENST00000487699 MCMDC2Q4G0Z9 681 aa11.64□□□□□ -0.55
SATB1-215ENST00000487699 TREML2Q5T2D2 321 aa11.64□□□□□ -0.55
SATB1-215ENST00000487699 POTEEQ6S8J3 1075 aa11.64□□□□□ -0.55
SATB1-215ENST00000487699 C17orf99Q6UX52 265 aa11.64□□□□□ -0.55
SATB1-215ENST00000487699 ACER1Q8TDN7 264 aa11.64□□□□□ -0.55
SATB1-215ENST00000487699 EMILIN3Q9NT22 766 aa11.64□□□□□ -0.55
SATB1-215ENST00000487699 TAOK2Q9UL54 1235 aa11.64□□□□□ -0.55
SATB1-215ENST00000487699 PTPRFP10586 1907 aa11.64□□□□□ -0.55
SATB1-215ENST00000487699 ATAD5Q96QE3 1844 aa11.63□□□□□ -0.55
SATB1-215ENST00000487699 HTTP42858 3142 aa11.63□□□□□ -0.55
SATB1-215ENST00000487699 PDHXO00330 501 aa11.63□□□□□ -0.55
SATB1-215ENST00000487699 BACE1P56817 501 aa11.63□□□□□ -0.55
SATB1-215ENST00000487699 ALX1Q15699 326 aa11.63□□□□□ -0.55
SATB1-215ENST00000487699 ABCB5Q2M3G0 1257 aa11.63□□□□□ -0.55
SATB1-215ENST00000487699 KIAA1755Q5JYT7 1200 aa11.63□□□□□ -0.55
SATB1-215ENST00000487699 CENPQQ7L2Z9 268 aaPredicted RBP11.63□□□□□ -0.55
SATB1-215ENST00000487699 NKX2-3Q8TAU0 364 aa11.63□□□□□ -0.55
SATB1-215ENST00000487699 TBC1D2Q9BYX2 928 aa11.63□□□□□ -0.55
SATB1-215ENST00000487699 ARPP21Q9UBL0 812 aaPredicted RBP11.63□□□□□ -0.55
SATB1-215ENST00000487699 SWAP70Q9UH65 585 aa11.63□□□□□ -0.55
SATB1-215ENST00000487699 CASP8AP2Q9UKL3 1982 aa11.63□□□□□ -0.55
SATB1-215ENST00000487699 TLR2O60603 784 aa11.62□□□□□ -0.55
SATB1-215ENST00000487699 CYP2C8P10632 490 aa11.62□□□□□ -0.55
SATB1-215ENST00000487699 HSPD1P10809 573 aaKnown RBP11.62□□□□□ -0.55
SATB1-215ENST00000487699 RASA1P20936 1047 aa11.62□□□□□ -0.55
SATB1-215ENST00000487699 CTGFP29279 349 aa11.62□□□□□ -0.55
SATB1-215ENST00000487699 HMGCS2P54868 508 aa11.62□□□□□ -0.55
SATB1-215ENST00000487699 MTMR2Q13614 643 aa11.62□□□□□ -0.55
SATB1-215ENST00000487699 TAF1CQ15572 869 aaPredicted RBP11.62□□□□□ -0.55
SATB1-215ENST00000487699 OTUD7BQ6GQQ9 843 aa11.62□□□□□ -0.55
SATB1-215ENST00000487699 FASTKD5Q7L8L6 764 aaKnown RBP11.62□□□□□ -0.55
SATB1-215ENST00000487699 CLEC10AQ8IUN9 316 aa11.62□□□□□ -0.55
SATB1-215ENST00000487699 PROCA1Q8NCQ7 364 aaPredicted RBP11.62□□□□□ -0.55
SATB1-215ENST00000487699 NBPF3Q9H094 633 aa11.62□□□□□ -0.55
SATB1-215ENST00000487699 INCENPQ9NQS7 918 aa11.62□□□□□ -0.55
SATB1-215ENST00000487699 AGTPBP1Q9UPW5 1226 aa11.62□□□□□ -0.55
SATB1-215ENST00000487699 SLC45A1Q9Y2W3 748 aa11.62□□□□□ -0.55
SATB1-215ENST00000487699 IGKV6D-41A0A0C4DH26 115 aa11.61□□□□□ -0.55
SATB1-215ENST00000487699 MINDY4BA8MYZ0 360 aa11.61□□□□□ -0.55
SATB1-215ENST00000487699 USP17L10C9JJH3 530 aa11.61□□□□□ -0.55
SATB1-215ENST00000487699 FKTNO75072 461 aa11.61□□□□□ -0.55
SATB1-215ENST00000487699 FGAP02671 866 aa11.61□□□□□ -0.55
SATB1-215ENST00000487699 FGRP09769 529 aa11.61□□□□□ -0.55
SATB1-215ENST00000487699 BCRP11274 1271 aa11.61□□□□□ -0.55
SATB1-215ENST00000487699 GADL1Q6ZQY3 521 aa11.61□□□□□ -0.55
SATB1-215ENST00000487699 C12orf42Q96LP6 360 aa11.61□□□□□ -0.55
SATB1-215ENST00000487699 TRIM34Q9BYJ4 488 aa11.61□□□□□ -0.55
SATB1-215ENST00000487699 AS3MTQ9HBK9 375 aa11.61□□□□□ -0.55
SATB1-215ENST00000487699 ZFYVE28Q9HCC9 887 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms