RNA–Protein interactions for RNA: ENST00000478720.1

ITSN2-211, Transcript of intersectin 2, humanhuman

TSL 2

Gene ITSN2, Length 2,035 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-211ENST00000478720 PCDHA5Q9Y5H7 936 aa17.2■□□□□ 0.34
ITSN2-211ENST00000478720 PDS5AQ29RF7 1337 aaKnown RBP17.19■□□□□ 0.34
ITSN2-211ENST00000478720 MYH13Q9UKX3 1938 aa17.19■□□□□ 0.34
ITSN2-211ENST00000478720 GRIN1Q05586 938 aa17.19■□□□□ 0.34
ITSN2-211ENST00000478720 FUT2Q10981 343 aa17.19■□□□□ 0.34
ITSN2-211ENST00000478720 TBC1D9BQ66K14 1250 aa17.19■□□□□ 0.34
ITSN2-211ENST00000478720 OXER1Q8TDS5 423 aa17.19■□□□□ 0.34
ITSN2-211ENST00000478720 CEP131Q9UPN4 1083 aa17.19■□□□□ 0.34
ITSN2-211ENST00000478720 PCDHB6Q9Y5E3 794 aa17.19■□□□□ 0.34
ITSN2-211ENST00000478720 SRPRBQ9Y5M8 271 aaKnown RBP17.19■□□□□ 0.34
ITSN2-211ENST00000478720 PRPF3O43395 683 aaKnown RBP17.18■□□□□ 0.34
ITSN2-211ENST00000478720 SYCP1Q15431 976 aa17.18■□□□□ 0.34
ITSN2-211ENST00000478720 PKN1Q16512 942 aa17.18■□□□□ 0.34
ITSN2-211ENST00000478720 SHISA4Q96DD7 197 aa17.18■□□□□ 0.34
ITSN2-211ENST00000478720 LAMB1P07942 1786 aa17.18■□□□□ 0.34
ITSN2-211ENST00000478720 MAST2Q6P0Q8 1798 aa17.18■□□□□ 0.34
ITSN2-211ENST00000478720 CYP2D7A0A087X1C5 515 aa17.18■□□□□ 0.34
ITSN2-211ENST00000478720 CBFA2T2O43439 604 aa17.18■□□□□ 0.34
ITSN2-211ENST00000478720 ATP1A3P13637 1013 aa17.18■□□□□ 0.34
ITSN2-211ENST00000478720 KCNJ6P48051 423 aa17.18■□□□□ 0.34
ITSN2-211ENST00000478720 AKAP17AQ02040 695 aaKnown RBP17.18■□□□□ 0.34
ITSN2-211ENST00000478720 PTPN14Q15678 1187 aa17.18■□□□□ 0.34
ITSN2-211ENST00000478720 SPECC1Q5M775 1068 aa17.18■□□□□ 0.34
ITSN2-211ENST00000478720 IFIT1BQ5T764 474 aaKnown RBP17.18■□□□□ 0.34
ITSN2-211ENST00000478720 CTR9Q6PD62 1173 aa17.18■□□□□ 0.34
ITSN2-211ENST00000478720 CATIPQ7Z7H3 387 aa17.18■□□□□ 0.34
ITSN2-211ENST00000478720 NOL10Q9BSC4 688 aaKnown RBP17.18■□□□□ 0.34
ITSN2-211ENST00000478720 RBM28Q9NW13 759 aaKnown RBP17.18■□□□□ 0.34
ITSN2-211ENST00000478720 FOXN1O15353 648 aa17.17■□□□□ 0.34
ITSN2-211ENST00000478720 XBP1P17861 261 aa17.17■□□□□ 0.34
ITSN2-211ENST00000478720 SFPQP23246 707 aaKnown RBP eCLIP17.17■□□□□ 0.34
ITSN2-211ENST00000478720 POSTNQ15063 836 aa17.17■□□□□ 0.34
ITSN2-211ENST00000478720 NT5DC1Q5TFE4 455 aa17.17■□□□□ 0.34
ITSN2-211ENST00000478720 BICDL1Q6ZP65 573 aa17.17■□□□□ 0.34
ITSN2-211ENST00000478720 CCDC112Q8NEF3 446 aa17.17■□□□□ 0.34
ITSN2-211ENST00000478720 NSUN4Q96CB9 384 aaKnown RBP17.17■□□□□ 0.34
ITSN2-211ENST00000478720 NYXQ9GZU5 481 aa17.17■□□□□ 0.34
ITSN2-211ENST00000478720 CALM1P0DP23 149 aa17.16■□□□□ 0.34
ITSN2-211ENST00000478720 CALM2P0DP24 149 aa17.16■□□□□ 0.34
ITSN2-211ENST00000478720 CALM3P0DP25 149 aa17.16■□□□□ 0.34
ITSN2-211ENST00000478720 BMP6P22004 513 aa17.16■□□□□ 0.34
ITSN2-211ENST00000478720 GTF2E1P29083 439 aaPredicted RBP17.16■□□□□ 0.34
ITSN2-211ENST00000478720 IQCA1Q86XH1 822 aa17.16■□□□□ 0.34
ITSN2-211ENST00000478720 PHF20Q9BVI0 1012 aa17.16■□□□□ 0.34
ITSN2-211ENST00000478720 CABP5Q9NP86 173 aa17.16■□□□□ 0.34
ITSN2-211ENST00000478720 MAN1B1Q9UKM7 699 aa17.16■□□□□ 0.34
ITSN2-211ENST00000478720 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.16■□□□□ 0.34
ITSN2-211ENST00000478720 POLR2DO15514 142 aaKnown RBP17.16■□□□□ 0.34
ITSN2-211ENST00000478720 DDAH1O94760 285 aa17.16■□□□□ 0.34
ITSN2-211ENST00000478720 KLRK1P26718 216 aa17.16■□□□□ 0.34
ITSN2-211ENST00000478720 SARSP49591 514 aaKnown RBP17.16■□□□□ 0.34
ITSN2-211ENST00000478720 RPS8P62241 208 aaKnown RBP17.16■□□□□ 0.34
ITSN2-211ENST00000478720 TROAPQ12815 778 aa17.16■□□□□ 0.34
ITSN2-211ENST00000478720 RC3H1Q5TC82 1133 aaKnown RBP17.16■□□□□ 0.34
ITSN2-211ENST00000478720 CCDC94Q9BW85 323 aaPredicted RBP17.16■□□□□ 0.34
ITSN2-211ENST00000478720 NARFQ9UHQ1 456 aa17.16■□□□□ 0.34
ITSN2-211ENST00000478720 SERTAD1Q9UHV2 236 aa17.16■□□□□ 0.34
ITSN2-211ENST00000478720 KIF2AO00139 706 aaPredicted RBP17.15■□□□□ 0.34
ITSN2-211ENST00000478720 ORC4O43929 436 aa17.15■□□□□ 0.34
ITSN2-211ENST00000478720 KRT2P35908 639 aa17.15■□□□□ 0.34
ITSN2-211ENST00000478720 UBASH3AP57075 661 aa17.15■□□□□ 0.34
ITSN2-211ENST00000478720 MECOMQ03112 1051 aa17.15■□□□□ 0.34
ITSN2-211ENST00000478720 PDE4BQ07343 736 aa17.15■□□□□ 0.34
ITSN2-211ENST00000478720 E4F1Q66K89 784 aaPredicted RBP17.15■□□□□ 0.34
ITSN2-211ENST00000478720 DPF2Q92785 391 aa17.15■□□□□ 0.34
ITSN2-211ENST00000478720 ANKRD2Q9GZV1 360 aa17.15■□□□□ 0.34
ITSN2-211ENST00000478720 TRMT1Q9NXH9 659 aaKnown RBP17.15■□□□□ 0.34
ITSN2-211ENST00000478720 VPS54Q9P1Q0 977 aa17.15■□□□□ 0.34
ITSN2-211ENST00000478720 PSDA5PKW4 1024 aaPredicted RBP17.14■□□□□ 0.34
ITSN2-211ENST00000478720 USP17L12C9JPN9 530 aa17.14■□□□□ 0.34
ITSN2-211ENST00000478720 USP17L21D6R901 530 aa17.14■□□□□ 0.34
ITSN2-211ENST00000478720 ZBTB22O15209 634 aa17.14■□□□□ 0.34
ITSN2-211ENST00000478720 ACTN4O43707 911 aaKnown RBP17.14■□□□□ 0.34
ITSN2-211ENST00000478720 PLEKHA8P1O95397 391 aa17.14■□□□□ 0.34
ITSN2-211ENST00000478720 KCNQ4P56696 695 aa17.14■□□□□ 0.34
ITSN2-211ENST00000478720 KANK3Q6NY19 840 aa17.14■□□□□ 0.34
ITSN2-211ENST00000478720 NLRP3Q96P20 1036 aa17.14■□□□□ 0.34
ITSN2-211ENST00000478720 KIAA1551Q9HCM1 1747 aa17.14■□□□□ 0.34
ITSN2-211ENST00000478720 TRIM75PA6NK02 468 aa17.14■□□□□ 0.33
ITSN2-211ENST00000478720 NRDCO43847 1150 aa17.14■□□□□ 0.33
ITSN2-211ENST00000478720 PRDM1O75626 825 aa17.14■□□□□ 0.33
ITSN2-211ENST00000478720 SERPINC1P01008 464 aa17.14■□□□□ 0.33
ITSN2-211ENST00000478720 PRR29P0C7W0 189 aa17.14■□□□□ 0.33
ITSN2-211ENST00000478720 HIBADHP31937 336 aaKnown RBP17.14■□□□□ 0.33
ITSN2-211ENST00000478720 NCBP1Q09161 790 aaKnown RBP17.14■□□□□ 0.33
ITSN2-211ENST00000478720 MORC3Q14149 939 aa17.14■□□□□ 0.33
ITSN2-211ENST00000478720 FAM98CQ17RN3 349 aaKnown RBP17.14■□□□□ 0.33
ITSN2-211ENST00000478720 TMED8Q6PL24 325 aaPredicted RBP17.14■□□□□ 0.33
ITSN2-211ENST00000478720 TMTC3Q6ZXV5 915 aa17.14■□□□□ 0.33
ITSN2-211ENST00000478720 TRIML1Q8N9V2 468 aa17.14■□□□□ 0.33
ITSN2-211ENST00000478720 CSRNP2Q9H175 543 aa17.14■□□□□ 0.33
ITSN2-211ENST00000478720 FANCLQ9NW38 375 aa17.14■□□□□ 0.33
ITSN2-211ENST00000478720 AATFQ9NY61 560 aaKnown RBP eCLIP17.14■□□□□ 0.33
ITSN2-211ENST00000478720 CCDC88AQ3V6T2 1871 aa17.13■□□□□ 0.33
ITSN2-211ENST00000478720 FAM205CA6NFA0 338 aa17.13■□□□□ 0.33
ITSN2-211ENST00000478720 RPS6KA4O75676 772 aa17.13■□□□□ 0.33
ITSN2-211ENST00000478720 VSTM4Q8IW00 320 aa17.13■□□□□ 0.33
ITSN2-211ENST00000478720 MLKLQ8NB16 471 aa17.13■□□□□ 0.33
ITSN2-211ENST00000478720 ZNF592Q92610 1267 aa17.13■□□□□ 0.33
ITSN2-211ENST00000478720 SMARCE1Q969G3 411 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms