RNA–Protein interactions for RNA: ENST00000478080.5

CDHR3-211, Transcript of cadherin related family member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDHR3, Length 2,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-211ENST00000478080 DYNLL2Q96FJ2 89 aa10.25□□□□□ -0.77
CDHR3-211ENST00000478080 BCL11BQ9C0K0 894 aaPredicted RBP10.25□□□□□ -0.77
CDHR3-211ENST00000478080 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.25□□□□□ -0.77
CDHR3-211ENST00000478080 PCDHB6Q9Y5E3 794 aa10.25□□□□□ -0.77
CDHR3-211ENST00000478080 BAZ2BQ9UIF8 2168 aaKnown RBP10.24□□□□□ -0.77
CDHR3-211ENST00000478080 BECN2A8MW95 431 aa10.24□□□□□ -0.77
CDHR3-211ENST00000478080 ONECUT3O60422 494 aaPredicted RBP10.24□□□□□ -0.77
CDHR3-211ENST00000478080 PPP6R2O75170 966 aa10.24□□□□□ -0.77
CDHR3-211ENST00000478080 TRIM37O94972 964 aa10.24□□□□□ -0.77
CDHR3-211ENST00000478080 FGRP09769 529 aa10.24□□□□□ -0.77
CDHR3-211ENST00000478080 FUT2Q10981 343 aa10.24□□□□□ -0.77
CDHR3-211ENST00000478080 TROAPQ12815 778 aa10.24□□□□□ -0.77
CDHR3-211ENST00000478080 CCDC144BQ3MJ40 725 aa10.24□□□□□ -0.77
CDHR3-211ENST00000478080 NOM1Q5C9Z4 860 aaKnown RBP10.24□□□□□ -0.77
CDHR3-211ENST00000478080 CATIPQ7Z7H3 387 aa10.24□□□□□ -0.77
CDHR3-211ENST00000478080 IQCA1Q86XH1 822 aa10.24□□□□□ -0.77
CDHR3-211ENST00000478080 MTA3Q9BTC8 594 aa10.24□□□□□ -0.77
CDHR3-211ENST00000478080 CABP5Q9NP86 173 aa10.24□□□□□ -0.77
CDHR3-211ENST00000478080 SERPINB2P05120 415 aa10.24□□□□□ -0.77
CDHR3-211ENST00000478080 LDHBP07195 334 aaKnown RBP10.24□□□□□ -0.77
CDHR3-211ENST00000478080 VEGFAP15692 232 aaPredicted RBP10.24□□□□□ -0.77
CDHR3-211ENST00000478080 SAFBQ15424 915 aaKnown RBP eCLIP10.24□□□□□ -0.77
CDHR3-211ENST00000478080 RPGRQ92834 1020 aaKnown RBP10.24□□□□□ -0.77
CDHR3-211ENST00000478080 QTRT2Q9H974 415 aaKnown RBP10.24□□□□□ -0.77
CDHR3-211ENST00000478080 CLIP2Q9UDT6 1046 aa10.24□□□□□ -0.77
CDHR3-211ENST00000478080 TRPC5Q9UL62 973 aaPredicted RBP10.24□□□□□ -0.77
CDHR3-211ENST00000478080 HPSEQ9Y251 543 aa10.24□□□□□ -0.77
CDHR3-211ENST00000478080 PDS5AQ29RF7 1337 aaKnown RBP10.24□□□□□ -0.77
CDHR3-211ENST00000478080 FOXN1O15353 648 aa10.23□□□□□ -0.77
CDHR3-211ENST00000478080 PNOCQ13519 176 aa10.23□□□□□ -0.77
CDHR3-211ENST00000478080 ARID5BQ14865 1188 aa10.23□□□□□ -0.77
CDHR3-211ENST00000478080 LONRF3Q496Y0 759 aa10.23□□□□□ -0.77
CDHR3-211ENST00000478080 CEP57L1Q8IYX8 460 aa10.23□□□□□ -0.77
CDHR3-211ENST00000478080 RGS22Q8NE09 1264 aa10.23□□□□□ -0.77
CDHR3-211ENST00000478080 ATP8A2Q9NTI2 1148 aa10.23□□□□□ -0.77
CDHR3-211ENST00000478080 XDHP47989 1333 aa10.23□□□□□ -0.77
CDHR3-211ENST00000478080 TSPY2A6NKD2 308 aa10.23□□□□□ -0.77
CDHR3-211ENST00000478080 WNT7AO00755 349 aa10.23□□□□□ -0.77
CDHR3-211ENST00000478080 ADAMTS3O15072 1205 aa10.23□□□□□ -0.77
CDHR3-211ENST00000478080 UFL1O94874 794 aa10.23□□□□□ -0.77
CDHR3-211ENST00000478080 CAVIN2O95810 425 aa10.23□□□□□ -0.77
CDHR3-211ENST00000478080 AKAP17AQ02040 695 aaKnown RBP10.23□□□□□ -0.77
CDHR3-211ENST00000478080 DNTTIP2Q5QJE6 756 aaKnown RBP10.23□□□□□ -0.77
CDHR3-211ENST00000478080 RESP18Q5W5W9 173 aa10.23□□□□□ -0.77
CDHR3-211ENST00000478080 SRBD1Q8N5C6 995 aaKnown RBP10.23□□□□□ -0.77
CDHR3-211ENST00000478080 RNF26Q9BY78 433 aaPredicted RBP10.23□□□□□ -0.77
CDHR3-211ENST00000478080 FOXP1Q9H334 677 aaPredicted RBP10.23□□□□□ -0.77
CDHR3-211ENST00000478080 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.23□□□□□ -0.77
CDHR3-211ENST00000478080 LEMD3Q9Y2U8 911 aa10.23□□□□□ -0.77
CDHR3-211ENST00000478080 GOLGA6L6A8MZA4 724 aa10.22□□□□□ -0.77
CDHR3-211ENST00000478080 USP5P45974 858 aa10.22□□□□□ -0.77
CDHR3-211ENST00000478080 DDR1Q08345 913 aa10.22□□□□□ -0.77
CDHR3-211ENST00000478080 JMYQ8N9B5 988 aa10.22□□□□□ -0.77
CDHR3-211ENST00000478080 SLC44A5Q8NCS7 719 aa10.22□□□□□ -0.77
CDHR3-211ENST00000478080 KIAA1524Q8TCG1 905 aa10.22□□□□□ -0.77
CDHR3-211ENST00000478080 TGFBRAP1Q8WUH2 860 aa10.22□□□□□ -0.77
CDHR3-211ENST00000478080 SAP30BPQ9UHR5 308 aaKnown RBP10.22□□□□□ -0.77
CDHR3-211ENST00000478080 MTMR7Q9Y216 660 aa10.22□□□□□ -0.77
CDHR3-211ENST00000478080 MYH6P13533 1939 aa10.22□□□□□ -0.77
CDHR3-211ENST00000478080 CCDC88AQ3V6T2 1871 aa10.22□□□□□ -0.77
CDHR3-211ENST00000478080 ORC4O43929 436 aa10.22□□□□□ -0.77
CDHR3-211ENST00000478080 RCAN1P53805 252 aa10.22□□□□□ -0.77
CDHR3-211ENST00000478080 HSP90AA2PQ14568 343 aaPredicted RBP10.22□□□□□ -0.77
CDHR3-211ENST00000478080 ZRSR1Q15695 479 aaKnown RBP10.22□□□□□ -0.77
CDHR3-211ENST00000478080 USP49Q70CQ1 688 aa10.22□□□□□ -0.77
CDHR3-211ENST00000478080 FOXP4Q8IVH2 680 aaPredicted RBP10.22□□□□□ -0.77
CDHR3-211ENST00000478080 KRI1Q8N9T8 703 aaKnown RBP10.22□□□□□ -0.77
CDHR3-211ENST00000478080 ARPP21Q9UBL0 812 aaPredicted RBP10.22□□□□□ -0.77
CDHR3-211ENST00000478080 MKRN1Q9UHC7 482 aaKnown RBP10.22□□□□□ -0.77
CDHR3-211ENST00000478080 KCNH3Q9ULD8 1083 aa10.22□□□□□ -0.77
CDHR3-211ENST00000478080 PRPF3O43395 683 aaKnown RBP10.21□□□□□ -0.77
CDHR3-211ENST00000478080 CUTAO60888 179 aa10.21□□□□□ -0.77
CDHR3-211ENST00000478080 PLCD1P51178 756 aa10.21□□□□□ -0.77
CDHR3-211ENST00000478080 TFAP4Q01664 338 aa10.21□□□□□ -0.77
CDHR3-211ENST00000478080 SPTY2D1Q68D10 685 aaPredicted RBP10.21□□□□□ -0.77
CDHR3-211ENST00000478080 RCSD1Q6JBY9 416 aa10.21□□□□□ -0.77
CDHR3-211ENST00000478080 METTL16Q86W50 562 aaKnown RBP10.21□□□□□ -0.77
CDHR3-211ENST00000478080 MAPKAPK5Q8IW41 473 aa10.21□□□□□ -0.77
CDHR3-211ENST00000478080 WDR66Q8TBY9 1149 aa10.21□□□□□ -0.77
CDHR3-211ENST00000478080 PHF20Q9BVI0 1012 aa10.21□□□□□ -0.77
CDHR3-211ENST00000478080 CD209Q9NNX6 404 aa10.21□□□□□ -0.77
CDHR3-211ENST00000478080 IL17RBQ9NRM6 502 aa10.21□□□□□ -0.77
CDHR3-211ENST00000478080 FAM13BQ9NYF5 915 aa10.21□□□□□ -0.77
CDHR3-211ENST00000478080 FBXO2Q9UK22 296 aaPredicted RBP10.21□□□□□ -0.77
CDHR3-211ENST00000478080 KIAA1551Q9HCM1 1747 aa10.21□□□□□ -0.77
CDHR3-211ENST00000478080 USP17L3A6NCW0 530 aa10.21□□□□□ -0.78
CDHR3-211ENST00000478080 USP17L4A6NCW7 530 aa10.21□□□□□ -0.78
CDHR3-211ENST00000478080 NLRP12P59046 1061 aa10.21□□□□□ -0.78
CDHR3-211ENST00000478080 PDE4BQ07343 736 aa10.21□□□□□ -0.78
CDHR3-211ENST00000478080 CRY2Q49AN0 593 aa10.21□□□□□ -0.78
CDHR3-211ENST00000478080 SBK1Q52WX2 424 aa10.21□□□□□ -0.78
CDHR3-211ENST00000478080 RILPL1Q5EBL4 403 aa10.21□□□□□ -0.78
CDHR3-211ENST00000478080 C12orf60Q5U649 245 aa10.21□□□□□ -0.78
CDHR3-211ENST00000478080 SARM1Q6SZW1 724 aa10.21□□□□□ -0.78
CDHR3-211ENST00000478080 TMTC3Q6ZXV5 915 aa10.21□□□□□ -0.78
CDHR3-211ENST00000478080 USP17L1Q7RTZ2 530 aa10.21□□□□□ -0.78
CDHR3-211ENST00000478080 ZNF804AQ7Z570 1209 aa10.21□□□□□ -0.78
CDHR3-211ENST00000478080 GRAMD1CQ8IYS0 662 aa10.21□□□□□ -0.78
CDHR3-211ENST00000478080 PROM2Q8N271 834 aa10.21□□□□□ -0.78
CDHR3-211ENST00000478080 PDILTQ8N807 584 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms