RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 RTCBQ9Y3I0 505 aaKnown RBP5.6□□□□□ -1.51
VPS13D-206ENST00000476045 ATP10DQ9P241 1426 aa5.59□□□□□ -1.51
VPS13D-206ENST00000476045 DLG5Q8TDM6 1919 aa5.59□□□□□ -1.51
VPS13D-206ENST00000476045 DICER1Q9UPY3 1922 aaKnown RBP5.59□□□□□ -1.51
VPS13D-206ENST00000476045 CCER2I3L3R5 266 aa5.59□□□□□ -1.51
VPS13D-206ENST00000476045 TNNT2P45379 298 aaPredicted RBP5.59□□□□□ -1.51
VPS13D-206ENST00000476045 CABP4P57796 275 aa5.59□□□□□ -1.51
VPS13D-206ENST00000476045 GRIK5Q16478 980 aa5.59□□□□□ -1.51
VPS13D-206ENST00000476045 AKAP4Q5JQC9 854 aa5.59□□□□□ -1.51
VPS13D-206ENST00000476045 C8orf86Q6ZUL3 223 aa5.59□□□□□ -1.51
VPS13D-206ENST00000476045 TREML1Q86YW5 311 aa5.59□□□□□ -1.51
VPS13D-206ENST00000476045 NLGN2Q8NFZ4 835 aa5.59□□□□□ -1.51
VPS13D-206ENST00000476045 LPIN3Q9BQK8 851 aa5.59□□□□□ -1.51
VPS13D-206ENST00000476045 UBE2OQ9C0C9 1292 aaKnown RBP5.59□□□□□ -1.51
VPS13D-206ENST00000476045 KDM3BQ7LBC6 1761 aa5.59□□□□□ -1.51
VPS13D-206ENST00000476045 SBF1O95248 1867 aa5.58□□□□□ -1.52
VPS13D-206ENST00000476045 COL15A1P39059 1388 aa5.58□□□□□ -1.52
VPS13D-206ENST00000476045 TMEM88BA6NKF7 163 aa5.58□□□□□ -1.52
VPS13D-206ENST00000476045 ZBTB42B2RXF5 422 aa5.58□□□□□ -1.52
VPS13D-206ENST00000476045 LILRB5O75023 590 aa5.58□□□□□ -1.52
VPS13D-206ENST00000476045 BRD2P25440 801 aaKnown RBP5.58□□□□□ -1.52
VPS13D-206ENST00000476045 IL13P35225 146 aa5.58□□□□□ -1.52
VPS13D-206ENST00000476045 MTHFSP49914 203 aa5.58□□□□□ -1.52
VPS13D-206ENST00000476045 AFF1P51825 1210 aaKnown RBP5.58□□□□□ -1.52
VPS13D-206ENST00000476045 ITPK1Q13572 414 aa5.58□□□□□ -1.52
VPS13D-206ENST00000476045 TRIP4Q15650 581 aaPredicted RBP5.58□□□□□ -1.52
VPS13D-206ENST00000476045 MSL1Q68DK7 614 aa5.58□□□□□ -1.52
VPS13D-206ENST00000476045 SULT6B1Q6IMI4 303 aa5.58□□□□□ -1.52
VPS13D-206ENST00000476045 CAPN12Q6ZSI9 719 aa5.58□□□□□ -1.52
VPS13D-206ENST00000476045 DHX32Q7L7V1 743 aaKnown RBP5.58□□□□□ -1.52
VPS13D-206ENST00000476045 NLGN1Q8N2Q7 840 aa5.58□□□□□ -1.52
VPS13D-206ENST00000476045 ATG3Q9NT62 314 aa5.58□□□□□ -1.52
VPS13D-206ENST00000476045 CCDC87Q9NVE4 849 aa5.58□□□□□ -1.52
VPS13D-206ENST00000476045 ASAP1Q9ULH1 1129 aa5.58□□□□□ -1.52
VPS13D-206ENST00000476045 COL11A2P13942 1736 aaPredicted RBP5.57□□□□□ -1.52
VPS13D-206ENST00000476045 USP42Q9H9J4 1324 aaKnown RBP5.57□□□□□ -1.52
VPS13D-206ENST00000476045 DIAPH1O60610 1272 aaKnown RBP5.57□□□□□ -1.52
VPS13D-206ENST00000476045 RPS6KA4O75676 772 aa5.57□□□□□ -1.52
VPS13D-206ENST00000476045 NEFLP07196 543 aa5.57□□□□□ -1.52
VPS13D-206ENST00000476045 MMP10P09238 476 aa5.57□□□□□ -1.52
VPS13D-206ENST00000476045 TGFB2P61812 414 aa5.57□□□□□ -1.52
VPS13D-206ENST00000476045 PRRT3Q5FWE3 981 aa5.57□□□□□ -1.52
VPS13D-206ENST00000476045 TRAPPC3LQ5T215 181 aa5.57□□□□□ -1.52
VPS13D-206ENST00000476045 PSAPL1Q6NUJ1 521 aa5.57□□□□□ -1.52
VPS13D-206ENST00000476045 AEBP1Q8IUX7 1158 aa5.57□□□□□ -1.52
VPS13D-206ENST00000476045 CCDC82Q8N4S0 544 aa5.57□□□□□ -1.52
VPS13D-206ENST00000476045 CFAP53Q96M91 514 aa5.57□□□□□ -1.52
VPS13D-206ENST00000476045 PNMA5Q96PV4 448 aa5.57□□□□□ -1.52
VPS13D-206ENST00000476045 SLC52A2Q9HAB3 445 aa5.57□□□□□ -1.52
VPS13D-206ENST00000476045 TLR7Q9NYK1 1049 aaKnown RBP5.57□□□□□ -1.52
VPS13D-206ENST00000476045 ANKRD31Q8N7Z5 1873 aa5.57□□□□□ -1.52
VPS13D-206ENST00000476045 CEMIPQ8WUJ3 1361 aa5.56□□□□□ -1.52
VPS13D-206ENST00000476045 CACNA1SQ13698 1873 aa5.56□□□□□ -1.52
VPS13D-206ENST00000476045 SOS1Q07889 1333 aaPredicted RBP5.56□□□□□ -1.52
VPS13D-206ENST00000476045 A0A0A0MRY4 1105 aa5.56□□□□□ -1.52
VPS13D-206ENST00000476045 XYLBO75191 536 aa5.56□□□□□ -1.52
VPS13D-206ENST00000476045 YBX3P16989 372 aaKnown RBP eCLIP5.56□□□□□ -1.52
VPS13D-206ENST00000476045 TARSP26639 723 aaKnown RBP5.56□□□□□ -1.52
VPS13D-206ENST00000476045 RFC4P35249 363 aa5.56□□□□□ -1.52
VPS13D-206ENST00000476045 CRKLP46109 303 aaKnown RBP5.56□□□□□ -1.52
VPS13D-206ENST00000476045 DTWD1Q8N5C7 304 aa5.56□□□□□ -1.52
VPS13D-206ENST00000476045 NACC1Q96RE7 527 aa5.56□□□□□ -1.52
VPS13D-206ENST00000476045 FER1L6Q2WGJ9 1857 aa5.56□□□□□ -1.52
VPS13D-206ENST00000476045 CCDC88AQ3V6T2 1871 aa5.56□□□□□ -1.52
VPS13D-206ENST00000476045 WDR90Q96KV7 1748 aa5.55□□□□□ -1.52
VPS13D-206ENST00000476045 RNMTO43148 476 aaKnown RBP5.55□□□□□ -1.52
VPS13D-206ENST00000476045 RARAP10276 462 aa5.55□□□□□ -1.52
VPS13D-206ENST00000476045 GYS1P13807 737 aa5.55□□□□□ -1.52
VPS13D-206ENST00000476045 ELNP15502 786 aa5.55□□□□□ -1.52
VPS13D-206ENST00000476045 ATP2B4P23634 1241 aa5.55□□□□□ -1.52
VPS13D-206ENST00000476045 C1QTNF8P60827 252 aa5.55□□□□□ -1.52
VPS13D-206ENST00000476045 PERM1Q5SV97 790 aa5.55□□□□□ -1.52
VPS13D-206ENST00000476045 AMIGO3Q86WK7 504 aa5.55□□□□□ -1.52
VPS13D-206ENST00000476045 TTC5Q8N0Z6 440 aa5.55□□□□□ -1.52
VPS13D-206ENST00000476045 JPH1Q9HDC5 661 aaPredicted RBP5.55□□□□□ -1.52
VPS13D-206ENST00000476045 FAM13BQ9NYF5 915 aa5.55□□□□□ -1.52
VPS13D-206ENST00000476045 NUDCQ9Y266 331 aa5.55□□□□□ -1.52
VPS13D-206ENST00000476045 ANKRD36CQ5JPF3 1778 aa5.55□□□□□ -1.52
VPS13D-206ENST00000476045 CARMIL3Q8ND23 1372 aa5.55□□□□□ -1.52
VPS13D-206ENST00000476045 HEG1Q9ULI3 1381 aa5.55□□□□□ -1.52
VPS13D-206ENST00000476045 A0A087WZG4 1122 aa5.54□□□□□ -1.52
VPS13D-206ENST00000476045 K7ELQ4 463 aaPredicted RBP5.54□□□□□ -1.52
VPS13D-206ENST00000476045 SASH3O75995 380 aa5.54□□□□□ -1.52
VPS13D-206ENST00000476045 STARD3NLO95772 234 aa5.54□□□□□ -1.52
VPS13D-206ENST00000476045 ITGB7P26010 798 aa5.54□□□□□ -1.52
VPS13D-206ENST00000476045 ARID4AP29374 1257 aaPredicted RBP5.54□□□□□ -1.52
VPS13D-206ENST00000476045 TEFQ10587 303 aa5.54□□□□□ -1.52
VPS13D-206ENST00000476045 ADGRE1Q14246 886 aa5.54□□□□□ -1.52
VPS13D-206ENST00000476045 FAM35AQ86V20 835 aa5.54□□□□□ -1.52
VPS13D-206ENST00000476045 RGL4Q8IZJ4 473 aa5.54□□□□□ -1.52
VPS13D-206ENST00000476045 FMR1NBQ8N0W7 255 aaPredicted RBP5.54□□□□□ -1.52
VPS13D-206ENST00000476045 HELQQ8TDG4 1101 aa5.54□□□□□ -1.52
VPS13D-206ENST00000476045 TEX13AQ9BXU3 409 aaPredicted RBP5.54□□□□□ -1.52
VPS13D-206ENST00000476045 STIM2Q9P246 746 aa5.54□□□□□ -1.52
VPS13D-206ENST00000476045 NUP98P52948 1817 aa5.53□□□□□ -1.52
VPS13D-206ENST00000476045 GNAT3A8MTJ3 354 aa5.53□□□□□ -1.52
VPS13D-206ENST00000476045 MMP20O60882 483 aa5.53□□□□□ -1.52
VPS13D-206ENST00000476045 RGS9O75916 674 aaPredicted RBP5.53□□□□□ -1.52
VPS13D-206ENST00000476045 KIF4AO95239 1232 aa5.53□□□□□ -1.52
VPS13D-206ENST00000476045 SELPP16109 830 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms