RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 DLGAP5Q15398 846 aa16.06■□□□□ 0.16
TRAF4-210ENST00000475329 FOXD4L5Q5VV16 416 aaPredicted RBP16.06■□□□□ 0.16
TRAF4-210ENST00000475329 LARP1BQ659C4 914 aaKnown RBP16.06■□□□□ 0.16
TRAF4-210ENST00000475329 CPLX2Q6PUV4 134 aaKnown RBP16.06■□□□□ 0.16
TRAF4-210ENST00000475329 SLC44A5Q8NCS7 719 aa16.06■□□□□ 0.16
TRAF4-210ENST00000475329 FOXD4L4Q8WXT5 416 aaPredicted RBP16.06■□□□□ 0.16
TRAF4-210ENST00000475329 DDX11Q96FC9 970 aa16.06■□□□□ 0.16
TRAF4-210ENST00000475329 TMOD2Q9NZR1 351 aa16.06■□□□□ 0.16
TRAF4-210ENST00000475329 ZBTB12Q9Y330 459 aaPredicted RBP16.06■□□□□ 0.16
TRAF4-210ENST00000475329 VPS37CA5D8V6 355 aaPredicted RBP16.05■□□□□ 0.16
TRAF4-210ENST00000475329 SPDYE2BA6NHP3 402 aa16.05■□□□□ 0.16
TRAF4-210ENST00000475329 DDX11L8A8MPP1 907 aa16.05■□□□□ 0.16
TRAF4-210ENST00000475329 DTNBO60941 627 aa16.05■□□□□ 0.16
TRAF4-210ENST00000475329 BAG4O95429 457 aaKnown RBP16.05■□□□□ 0.16
TRAF4-210ENST00000475329 SPDYE6P0CI01 402 aa16.05■□□□□ 0.16
TRAF4-210ENST00000475329 TSPY3P0CV98 308 aa16.05■□□□□ 0.16
TRAF4-210ENST00000475329 TSPY8P0CW00 308 aa16.05■□□□□ 0.16
TRAF4-210ENST00000475329 MMP14P50281 582 aa16.05■□□□□ 0.16
TRAF4-210ENST00000475329 TFAP4Q01664 338 aa16.05■□□□□ 0.16
TRAF4-210ENST00000475329 NFIAQ12857 509 aa16.05■□□□□ 0.16
TRAF4-210ENST00000475329 RTN1Q16799 776 aa16.05■□□□□ 0.16
TRAF4-210ENST00000475329 ANP32EQ9BTT0 268 aa16.05■□□□□ 0.16
TRAF4-210ENST00000475329 MYL10Q9BUA6 226 aa16.05■□□□□ 0.16
TRAF4-210ENST00000475329 DHX36Q9H2U1 1008 aaKnown RBP16.05■□□□□ 0.16
TRAF4-210ENST00000475329 TDRD3Q9H7E2 651 aaKnown RBP16.05■□□□□ 0.16
TRAF4-210ENST00000475329 SWAP70Q9UH65 585 aa16.05■□□□□ 0.16
TRAF4-210ENST00000475329 PLIN4Q96Q06 1357 aa16.04■□□□□ 0.16
TRAF4-210ENST00000475329 ENTPD3O75355 529 aa16.04■□□□□ 0.16
TRAF4-210ENST00000475329 DDAH1O94760 285 aa16.04■□□□□ 0.16
TRAF4-210ENST00000475329 CALM1P0DP23 149 aa16.04■□□□□ 0.16
TRAF4-210ENST00000475329 CALM2P0DP24 149 aa16.04■□□□□ 0.16
TRAF4-210ENST00000475329 CALM3P0DP25 149 aa16.04■□□□□ 0.16
TRAF4-210ENST00000475329 RXRAP19793 462 aa16.04■□□□□ 0.16
TRAF4-210ENST00000475329 RPS12P25398 132 aaKnown RBP16.04■□□□□ 0.16
TRAF4-210ENST00000475329 CACNB3P54284 484 aa16.04■□□□□ 0.16
TRAF4-210ENST00000475329 EIF6P56537 245 aaKnown RBP16.04■□□□□ 0.16
TRAF4-210ENST00000475329 CATIPQ7Z7H3 387 aa16.04■□□□□ 0.16
TRAF4-210ENST00000475329 MTMR14Q8NCE2 650 aa16.04■□□□□ 0.16
TRAF4-210ENST00000475329 PRMT6Q96LA8 375 aaPredicted RBP16.04■□□□□ 0.16
TRAF4-210ENST00000475329 EHD4Q9H223 541 aa16.04■□□□□ 0.16
TRAF4-210ENST00000475329 TCP11L1Q9NUJ3 509 aa16.04■□□□□ 0.16
TRAF4-210ENST00000475329 FAM198AQ9UFP1 575 aa16.04■□□□□ 0.16
TRAF4-210ENST00000475329 SERPINB13Q9UIV8 391 aa16.04■□□□□ 0.16
TRAF4-210ENST00000475329 TAOK2Q9UL54 1235 aa16.04■□□□□ 0.16
TRAF4-210ENST00000475329 MTMR6Q9Y217 621 aa16.04■□□□□ 0.16
TRAF4-210ENST00000475329 CCDC196A0A1B0GTZ2 297 aa16.03■□□□□ 0.16
TRAF4-210ENST00000475329 GOLGA6L22H0YM25 854 aa16.03■□□□□ 0.16
TRAF4-210ENST00000475329 NMT2O60551 498 aa16.03■□□□□ 0.16
TRAF4-210ENST00000475329 F13A1P00488 732 aa16.03■□□□□ 0.16
TRAF4-210ENST00000475329 PTMSP20962 102 aa16.03■□□□□ 0.16
TRAF4-210ENST00000475329 CDC27P30260 824 aa16.03■□□□□ 0.16
TRAF4-210ENST00000475329 GABPAQ06546 454 aa16.03■□□□□ 0.16
TRAF4-210ENST00000475329 PPP2R5BQ15173 497 aa16.03■□□□□ 0.16
TRAF4-210ENST00000475329 CCDC144CPQ8IYA2 1237 aa16.03■□□□□ 0.16
TRAF4-210ENST00000475329 NUP133Q8WUM0 1156 aa16.03■□□□□ 0.16
TRAF4-210ENST00000475329 ATRNL1Q5VV63 1379 aa16.02■□□□□ 0.16
TRAF4-210ENST00000475329 STK36Q9NRP7 1315 aa16.02■□□□□ 0.16
TRAF4-210ENST00000475329 H3BQV1 296 aa16.02■□□□□ 0.16
TRAF4-210ENST00000475329 FZD9O00144 591 aa16.02■□□□□ 0.16
TRAF4-210ENST00000475329 PRELPP51888 382 aa16.02■□□□□ 0.16
TRAF4-210ENST00000475329 TCP10Q12799 353 aa16.02■□□□□ 0.16
TRAF4-210ENST00000475329 IFFO2Q5TF58 517 aa16.02■□□□□ 0.16
TRAF4-210ENST00000475329 ARHGAP27Q6ZUM4 889 aa16.02■□□□□ 0.16
TRAF4-210ENST00000475329 DGKHQ86XP1 1220 aa16.02■□□□□ 0.16
TRAF4-210ENST00000475329 NEDD1Q8NHV4 660 aa16.02■□□□□ 0.16
TRAF4-210ENST00000475329 ANKS1AQ92625 1134 aa16.02■□□□□ 0.16
TRAF4-210ENST00000475329 ORC3Q9UBD5 711 aaPredicted RBP16.02■□□□□ 0.16
TRAF4-210ENST00000475329 ATP6V1DQ9Y5K8 247 aa16.02■□□□□ 0.16
TRAF4-210ENST00000475329 ADD1P35611 737 aaKnown RBP16.01■□□□□ 0.15
TRAF4-210ENST00000475329 SPDYE2Q495Y8 402 aa16.01■□□□□ 0.15
TRAF4-210ENST00000475329 RCSD1Q6JBY9 416 aa16.01■□□□□ 0.15
TRAF4-210ENST00000475329 CDC37L1Q7L3B6 337 aa16.01■□□□□ 0.15
TRAF4-210ENST00000475329 ZSCAN29Q8IWY8 852 aaPredicted RBP16.01■□□□□ 0.15
TRAF4-210ENST00000475329 ZFPM1Q8IX07 1006 aa16.01■□□□□ 0.15
TRAF4-210ENST00000475329 CRACR2BQ8N4Y2 399 aaPredicted RBP16.01■□□□□ 0.15
TRAF4-210ENST00000475329 FANCBQ8NB91 859 aa16.01■□□□□ 0.15
TRAF4-210ENST00000475329 KAT14Q9H8E8 782 aa16.01■□□□□ 0.15
TRAF4-210ENST00000475329 IL17RBQ9NRM6 502 aa16.01■□□□□ 0.15
TRAF4-210ENST00000475329 FAM217BQ9NTX9 383 aaPredicted RBP16.01■□□□□ 0.15
TRAF4-210ENST00000475329 RBM28Q9NW13 759 aaKnown RBP16.01■□□□□ 0.15
TRAF4-210ENST00000475329 PI4KBQ9UBF8 816 aa16.01■□□□□ 0.15
TRAF4-210ENST00000475329 ZNF70Q9UC06 446 aaPredicted RBP16.01■□□□□ 0.15
TRAF4-210ENST00000475329 MYO1BO43795 1136 aa16■□□□□ 0.15
TRAF4-210ENST00000475329 FDPSP14324 419 aaKnown RBP16■□□□□ 0.15
TRAF4-210ENST00000475329 IFNAR1P17181 557 aa16■□□□□ 0.15
TRAF4-210ENST00000475329 LMNB1P20700 586 aa16■□□□□ 0.15
TRAF4-210ENST00000475329 ZNF280AP59817 542 aaPredicted RBP16■□□□□ 0.15
TRAF4-210ENST00000475329 NTRK3Q16288 839 aa16■□□□□ 0.15
TRAF4-210ENST00000475329 FKBP1CQ5VVH2 108 aa16■□□□□ 0.15
TRAF4-210ENST00000475329 ZBED3Q96IU2 234 aaPredicted RBP16■□□□□ 0.15
TRAF4-210ENST00000475329 SYT17Q9BSW7 474 aa16■□□□□ 0.15
TRAF4-210ENST00000475329 TRIM34Q9BYJ4 488 aa16■□□□□ 0.15
TRAF4-210ENST00000475329 ZNF541Q9H0D2 1346 aa15.99■□□□□ 0.15
TRAF4-210ENST00000475329 ATAD5Q96QE3 1844 aa15.99■□□□□ 0.15
TRAF4-210ENST00000475329 CLRN2A0PK11 232 aa15.99■□□□□ 0.15
TRAF4-210ENST00000475329 DDTLA6NHG4 134 aaPredicted RBP15.99■□□□□ 0.15
TRAF4-210ENST00000475329 PPFIA3O75145 1194 aa15.99■□□□□ 0.15
TRAF4-210ENST00000475329 FMNL1O95466 1100 aaPredicted RBP15.99■□□□□ 0.15
TRAF4-210ENST00000475329 SHMT1P34896 483 aa15.99■□□□□ 0.15
TRAF4-210ENST00000475329 GMPSP49915 693 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms