RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 PAK6Q9NQU5 681 aaPredicted RBP22.35■■□□□ 1.17
COL9A2-205ENST00000461118 AATFQ9NY61 560 aaKnown RBP eCLIP22.35■■□□□ 1.17
COL9A2-205ENST00000461118 SMARCA5O60264 1052 aaPredicted RBP22.34■■□□□ 1.17
COL9A2-205ENST00000461118 CYP7A1P22680 504 aa22.34■■□□□ 1.17
COL9A2-205ENST00000461118 CERS3Q8IU89 383 aa22.34■■□□□ 1.17
COL9A2-205ENST00000461118 TRIM75PA6NK02 468 aa22.33■■□□□ 1.17
COL9A2-205ENST00000461118 TBC1D12O60347 775 aa22.33■■□□□ 1.17
COL9A2-205ENST00000461118 TREML2Q5T2D2 321 aa22.33■■□□□ 1.17
COL9A2-205ENST00000461118 MAGEB6Q8N7X4 407 aa22.33■■□□□ 1.17
COL9A2-205ENST00000461118 CRISPLD2Q9H0B8 497 aa22.33■■□□□ 1.17
COL9A2-205ENST00000461118 OSBPL5Q9H0X9 879 aaPredicted RBP22.33■■□□□ 1.17
COL9A2-205ENST00000461118 AGTPBP1Q9UPW5 1226 aa22.33■■□□□ 1.17
COL9A2-205ENST00000461118 FOCADQ5VW36 1801 aa22.33■■□□□ 1.16
COL9A2-205ENST00000461118 TNPO2O14787 897 aaKnown RBP22.32■■□□□ 1.16
COL9A2-205ENST00000461118 ANKRD13CQ8N6S4 541 aa22.32■■□□□ 1.16
COL9A2-205ENST00000461118 BCL11AQ9H165 835 aa22.32■■□□□ 1.16
COL9A2-205ENST00000461118 COL6A3P12111 3177 aa22.32■■□□□ 1.16
COL9A2-205ENST00000461118 FAM196BA6NMK8 535 aa22.31■■□□□ 1.16
COL9A2-205ENST00000461118 GOLIM4O00461 696 aa22.31■■□□□ 1.16
COL9A2-205ENST00000461118 DEFB118Q96PH6 123 aa22.31■■□□□ 1.16
COL9A2-205ENST00000461118 HAUS7Q99871 368 aa22.31■■□□□ 1.16
COL9A2-205ENST00000461118 BOLA2Q9H3K6 86 aa22.31■■□□□ 1.16
COL9A2-205ENST00000461118 NR2E3Q9Y5X4 410 aa22.31■■□□□ 1.16
COL9A2-205ENST00000461118 RRP1BQ14684 758 aaKnown RBP22.3■■□□□ 1.16
COL9A2-205ENST00000461118 SMCR8Q8TEV9 937 aaPredicted RBP22.3■■□□□ 1.16
COL9A2-205ENST00000461118 DNAJC2Q99543 621 aaKnown RBP22.3■■□□□ 1.16
COL9A2-205ENST00000461118 DHX36Q9H2U1 1008 aaKnown RBP22.3■■□□□ 1.16
COL9A2-205ENST00000461118 PAG1Q9NWQ8 432 aa22.3■■□□□ 1.16
COL9A2-205ENST00000461118 DDX60LQ5H9U9 1706 aaKnown RBP22.3■■□□□ 1.16
COL9A2-205ENST00000461118 DYNLL1P63167 89 aaKnown RBP22.29■■□□□ 1.16
COL9A2-205ENST00000461118 FAM110CQ1W6H9 321 aa22.29■■□□□ 1.16
COL9A2-205ENST00000461118 SLC9C2Q5TAH2 1124 aa22.29■■□□□ 1.16
COL9A2-205ENST00000461118 TGFBRAP1Q8WUH2 860 aa22.29■■□□□ 1.16
COL9A2-205ENST00000461118 ECHDC1Q9NTX5 307 aa22.29■■□□□ 1.16
COL9A2-205ENST00000461118 SOX1O00570 391 aaPredicted RBP22.28■■□□□ 1.16
COL9A2-205ENST00000461118 PDE6AP16499 860 aa22.28■■□□□ 1.16
COL9A2-205ENST00000461118 HDAC1Q13547 482 aaPredicted RBP22.28■■□□□ 1.16
COL9A2-205ENST00000461118 PROCA1Q8NCQ7 364 aaPredicted RBP22.28■■□□□ 1.16
COL9A2-205ENST00000461118 FLT1P17948 1338 aa22.28■■□□□ 1.16
COL9A2-205ENST00000461118 A0A1W2PPC1 479 aa22.27■■□□□ 1.16
COL9A2-205ENST00000461118 TFRCP02786 760 aaKnown RBP22.27■■□□□ 1.16
COL9A2-205ENST00000461118 CAPN2P17655 700 aa22.27■■□□□ 1.16
COL9A2-205ENST00000461118 MAPKAPK5Q8IW41 473 aa22.27■■□□□ 1.16
COL9A2-205ENST00000461118 MIGA1Q8NAN2 632 aa22.27■■□□□ 1.16
COL9A2-205ENST00000461118 DIS3LQ8TF46 1054 aaKnown RBP22.27■■□□□ 1.16
COL9A2-205ENST00000461118 EDC3Q96F86 508 aaKnown RBP22.27■■□□□ 1.16
COL9A2-205ENST00000461118 RIOK1Q9BRS2 568 aaKnown RBP22.27■■□□□ 1.16
COL9A2-205ENST00000461118 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.27■■□□□ 1.16
COL9A2-205ENST00000461118 PI4KBQ9UBF8 816 aa22.27■■□□□ 1.16
COL9A2-205ENST00000461118 GJD2Q9UKL4 321 aa22.27■■□□□ 1.16
COL9A2-205ENST00000461118 TCRBV5S4A2TA0A5A2 114 aa22.26■■□□□ 1.15
COL9A2-205ENST00000461118 EVI5O60447 810 aa22.26■■□□□ 1.15
COL9A2-205ENST00000461118 SPP2Q13103 211 aa22.26■■□□□ 1.15
COL9A2-205ENST00000461118 METTL16Q86W50 562 aaKnown RBP22.26■■□□□ 1.15
COL9A2-205ENST00000461118 COA7Q96BR5 231 aa22.26■■□□□ 1.15
COL9A2-205ENST00000461118 PAWRQ96IZ0 340 aaKnown RBP22.26■■□□□ 1.15
COL9A2-205ENST00000461118 HERC5Q9UII4 1024 aaKnown RBP22.26■■□□□ 1.15
COL9A2-205ENST00000461118 MNX1P50219 401 aaPredicted RBP22.25■■□□□ 1.15
COL9A2-205ENST00000461118 FOXP4Q8IVH2 680 aaPredicted RBP22.25■■□□□ 1.15
COL9A2-205ENST00000461118 ZNF280CQ8ND82 737 aa22.25■■□□□ 1.15
COL9A2-205ENST00000461118 GPATCH3Q96I76 525 aa22.25■■□□□ 1.15
COL9A2-205ENST00000461118 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.25■■□□□ 1.15
COL9A2-205ENST00000461118 PNMA3Q9UL41 463 aa22.25■■□□□ 1.15
COL9A2-205ENST00000461118 SUPT16HQ9Y5B9 1047 aaKnown RBP22.25■■□□□ 1.15
COL9A2-205ENST00000461118 ZNF532Q9HCE3 1301 aa22.25■■□□□ 1.15
COL9A2-205ENST00000461118 MAGEB6P1A0A0J9YX57 407 aa22.24■■□□□ 1.15
COL9A2-205ENST00000461118 ADD2P35612 726 aa22.24■■□□□ 1.15
COL9A2-205ENST00000461118 CAP2P40123 477 aa22.24■■□□□ 1.15
COL9A2-205ENST00000461118 HMGCS2P54868 508 aa22.24■■□□□ 1.15
COL9A2-205ENST00000461118 SH3D19Q5HYK7 790 aa22.24■■□□□ 1.15
COL9A2-205ENST00000461118 STAP2Q9UGK3 403 aa22.24■■□□□ 1.15
COL9A2-205ENST00000461118 PALD1Q9ULE6 856 aa22.24■■□□□ 1.15
COL9A2-205ENST00000461118 TRIM32Q13049 653 aa22.23■■□□□ 1.15
COL9A2-205ENST00000461118 LRCH3Q96II8 777 aa22.23■■□□□ 1.15
COL9A2-205ENST00000461118 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.23■■□□□ 1.15
COL9A2-205ENST00000461118 ASCC2Q9H1I8 757 aaPredicted RBP22.23■■□□□ 1.15
COL9A2-205ENST00000461118 TAOK2Q9UL54 1235 aa22.23■■□□□ 1.15
COL9A2-205ENST00000461118 FRMPD3Q5JV73 1810 aa22.22■■□□□ 1.15
COL9A2-205ENST00000461118 USP5P45974 858 aa22.22■■□□□ 1.15
COL9A2-205ENST00000461118 GCLCP48506 637 aaPredicted RBP22.22■■□□□ 1.15
COL9A2-205ENST00000461118 JAG1P78504 1218 aa22.22■■□□□ 1.15
COL9A2-205ENST00000461118 UBE3CQ15386 1083 aa22.22■■□□□ 1.15
COL9A2-205ENST00000461118 TTC41PQ6P2S7 1318 aa22.22■■□□□ 1.15
COL9A2-205ENST00000461118 HMGCRP04035 888 aa22.21■■□□□ 1.15
COL9A2-205ENST00000461118 ZSCAN25Q6NSZ9 544 aa22.21■■□□□ 1.15
COL9A2-205ENST00000461118 ANKLE1Q8NAG6 615 aa22.21■■□□□ 1.15
COL9A2-205ENST00000461118 EXOC6Q8TAG9 804 aa22.21■■□□□ 1.15
COL9A2-205ENST00000461118 GDF15Q99988 308 aa22.21■■□□□ 1.15
COL9A2-205ENST00000461118 TBC1D2Q9BYX2 928 aa22.21■■□□□ 1.15
COL9A2-205ENST00000461118 MORF4L1Q9UBU8 362 aa22.21■■□□□ 1.15
COL9A2-205ENST00000461118 MYH1P12882 1939 aa22.2■■□□□ 1.14
COL9A2-205ENST00000461118 USP17L5A8MUK1 530 aa22.2■■□□□ 1.14
COL9A2-205ENST00000461118 HLA-DOAP06340 250 aa22.2■■□□□ 1.14
COL9A2-205ENST00000461118 NECAB2Q7Z6G3 386 aa22.2■■□□□ 1.14
COL9A2-205ENST00000461118 CRNKL1Q9BZJ0 848 aaKnown RBP22.2■■□□□ 1.14
COL9A2-205ENST00000461118 SAP30BPQ9UHR5 308 aaKnown RBP22.2■■□□□ 1.14
COL9A2-205ENST00000461118 PEX10O60683 326 aa22.19■■□□□ 1.14
COL9A2-205ENST00000461118 ANKRD45Q5TZF3 282 aa22.19■■□□□ 1.14
COL9A2-205ENST00000461118 TRIB2Q92519 343 aa22.19■■□□□ 1.14
COL9A2-205ENST00000461118 RWDD1Q9H446 243 aaPredicted RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms