RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 WDHD1O75717 1129 aaPredicted RBP10.46□□□□□ -0.73
COL28A1-205ENST00000453441 RGS3P49796 1198 aa10.46□□□□□ -0.73
COL28A1-205ENST00000453441 MFAP1P55081 439 aaKnown RBP10.46□□□□□ -0.73
COL28A1-205ENST00000453441 C1QTNF8P60827 252 aa10.46□□□□□ -0.73
COL28A1-205ENST00000453441 ZMYM1Q5SVZ6 1142 aa10.46□□□□□ -0.73
COL28A1-205ENST00000453441 NUDT18Q6ZVK8 323 aa10.46□□□□□ -0.73
COL28A1-205ENST00000453441 ADGRA1Q86SQ6 560 aa10.46□□□□□ -0.73
COL28A1-205ENST00000453441 USP48Q86UV5 1035 aa10.46□□□□□ -0.73
COL28A1-205ENST00000453441 RILPL2Q969X0 211 aa10.46□□□□□ -0.73
COL28A1-205ENST00000453441 CDCA5Q96FF9 252 aa10.46□□□□□ -0.73
COL28A1-205ENST00000453441 RIOK1Q9BRS2 568 aaKnown RBP10.46□□□□□ -0.73
COL28A1-205ENST00000453441 DHX36Q9H2U1 1008 aaKnown RBP10.46□□□□□ -0.73
COL28A1-205ENST00000453441 ATRNL1Q5VV63 1379 aa10.46□□□□□ -0.74
COL28A1-205ENST00000453441 PAPPA2Q9BXP8 1791 aa10.45□□□□□ -0.74
COL28A1-205ENST00000453441 CNTNAP1P78357 1384 aa10.45□□□□□ -0.74
COL28A1-205ENST00000453441 RAD50Q92878 1312 aa10.45□□□□□ -0.74
COL28A1-205ENST00000453441 TCP10L2B9ZVM9 353 aa10.45□□□□□ -0.74
COL28A1-205ENST00000453441 ADM5C9JUS6 153 aa10.45□□□□□ -0.74
COL28A1-205ENST00000453441 USP5P45974 858 aa10.45□□□□□ -0.74
COL28A1-205ENST00000453441 APLP1P51693 650 aa10.45□□□□□ -0.74
COL28A1-205ENST00000453441 DCAF15Q66K64 600 aa10.45□□□□□ -0.74
COL28A1-205ENST00000453441 GIMAP6Q6P9H5 292 aa10.45□□□□□ -0.74
COL28A1-205ENST00000453441 AMOTL1Q8IY63 956 aa10.45□□□□□ -0.74
COL28A1-205ENST00000453441 MIGA1Q8NAN2 632 aa10.45□□□□□ -0.74
COL28A1-205ENST00000453441 SH3RF3Q8TEJ3 882 aaPredicted RBP10.45□□□□□ -0.74
COL28A1-205ENST00000453441 RUFY2Q8WXA3 655 aa10.45□□□□□ -0.74
COL28A1-205ENST00000453441 DIAPH3Q9NSV4 1193 aa10.45□□□□□ -0.74
COL28A1-205ENST00000453441 ATP8A2Q9NTI2 1148 aa10.45□□□□□ -0.74
COL28A1-205ENST00000453441 CDK5RAP2Q96SN8 1893 aa10.44□□□□□ -0.74
COL28A1-205ENST00000453441 SOWAHBA6NEL2 793 aa10.44□□□□□ -0.74
COL28A1-205ENST00000453441 TMEM88BA6NKF7 163 aa10.44□□□□□ -0.74
COL28A1-205ENST00000453441 PPP1R12BO60237 982 aaPredicted RBP10.44□□□□□ -0.74
COL28A1-205ENST00000453441 MBD4O95243 580 aa10.44□□□□□ -0.74
COL28A1-205ENST00000453441 GSPT1P15170 499 aaKnown RBP10.44□□□□□ -0.74
COL28A1-205ENST00000453441 SDSP20132 328 aa10.44□□□□□ -0.74
COL28A1-205ENST00000453441 NFIAQ12857 509 aa10.44□□□□□ -0.74
COL28A1-205ENST00000453441 MCMDC2Q4G0Z9 681 aa10.44□□□□□ -0.74
COL28A1-205ENST00000453441 C2orf69Q8N8R5 385 aa10.44□□□□□ -0.74
COL28A1-205ENST00000453441 OSBPL5Q9H0X9 879 aaPredicted RBP10.44□□□□□ -0.74
COL28A1-205ENST00000453441 NAV1Q8NEY1 1877 aa10.43□□□□□ -0.74
COL28A1-205ENST00000453441 FLT1P17948 1338 aa10.43□□□□□ -0.74
COL28A1-205ENST00000453441 SMAPO00193 183 aa10.43□□□□□ -0.74
COL28A1-205ENST00000453441 GPAA1O43292 621 aa10.43□□□□□ -0.74
COL28A1-205ENST00000453441 CELF2O95319 508 aaKnown RBP10.43□□□□□ -0.74
COL28A1-205ENST00000453441 HLA-DOAP06340 250 aa10.43□□□□□ -0.74
COL28A1-205ENST00000453441 CACNB3P54284 484 aa10.43□□□□□ -0.74
COL28A1-205ENST00000453441 DYNLL1P63167 89 aaKnown RBP10.43□□□□□ -0.74
COL28A1-205ENST00000453441 CASC1Q6TDU7 716 aa10.43□□□□□ -0.74
COL28A1-205ENST00000453441 ARMC9Q7Z3E5 817 aa10.43□□□□□ -0.74
COL28A1-205ENST00000453441 TTC6Q86TZ1 520 aa10.43□□□□□ -0.74
COL28A1-205ENST00000453441 ZSCAN29Q8IWY8 852 aaPredicted RBP10.43□□□□□ -0.74
COL28A1-205ENST00000453441 LCORLQ8N3X6 602 aa10.43□□□□□ -0.74
COL28A1-205ENST00000453441 TGFBRAP1Q8WUH2 860 aa10.43□□□□□ -0.74
COL28A1-205ENST00000453441 OSBP2Q969R2 916 aa10.43□□□□□ -0.74
COL28A1-205ENST00000453441 HHIPL1Q96JK4 782 aa10.43□□□□□ -0.74
COL28A1-205ENST00000453441 TEPSINQ96N21 525 aa10.43□□□□□ -0.74
COL28A1-205ENST00000453441 STRBPQ96SI9 672 aaKnown RBP10.43□□□□□ -0.74
COL28A1-205ENST00000453441 NACAP1Q9BZK3 213 aa10.43□□□□□ -0.74
COL28A1-205ENST00000453441 PUS7LQ9H0K6 701 aaKnown RBP10.43□□□□□ -0.74
COL28A1-205ENST00000453441 ARMT1Q9H993 441 aa10.43□□□□□ -0.74
COL28A1-205ENST00000453441 GBA2Q9HCG7 927 aaPredicted RBP10.43□□□□□ -0.74
COL28A1-205ENST00000453441 PI4KBQ9UBF8 816 aa10.43□□□□□ -0.74
COL28A1-205ENST00000453441 HERC5Q9UII4 1024 aaKnown RBP10.43□□□□□ -0.74
COL28A1-205ENST00000453441 MYH1P12882 1939 aa10.43□□□□□ -0.74
COL28A1-205ENST00000453441 TRAF5O00463 557 aa10.42□□□□□ -0.74
COL28A1-205ENST00000453441 HSPA6P17066 643 aa10.42□□□□□ -0.74
COL28A1-205ENST00000453441 IREB2P48200 963 aaKnown RBP10.42□□□□□ -0.74
COL28A1-205ENST00000453441 MAP3K10Q02779 954 aa10.42□□□□□ -0.74
COL28A1-205ENST00000453441 TCP10Q12799 353 aa10.42□□□□□ -0.74
COL28A1-205ENST00000453441 PICALMQ13492 652 aa10.42□□□□□ -0.74
COL28A1-205ENST00000453441 MAP3K11Q16584 847 aa10.42□□□□□ -0.74
COL28A1-205ENST00000453441 GPIHBP1Q8IV16 184 aa10.42□□□□□ -0.74
COL28A1-205ENST00000453441 FOXP4Q8IVH2 680 aaPredicted RBP10.42□□□□□ -0.74
COL28A1-205ENST00000453441 LRCH3Q96II8 777 aa10.42□□□□□ -0.74
COL28A1-205ENST00000453441 CSRNP1Q96S65 589 aa10.42□□□□□ -0.74
COL28A1-205ENST00000453441 ZNF341Q9BYN7 854 aa10.42□□□□□ -0.74
COL28A1-205ENST00000453441 TMEM39BQ9GZU3 492 aa10.42□□□□□ -0.74
COL28A1-205ENST00000453441 EHD4Q9H223 541 aa10.42□□□□□ -0.74
COL28A1-205ENST00000453441 DDX4Q9NQI0 724 aaKnown RBP10.42□□□□□ -0.74
COL28A1-205ENST00000453441 ARPP21Q9UBL0 812 aaPredicted RBP10.42□□□□□ -0.74
COL28A1-205ENST00000453441 SLC4A4Q9Y6R1 1079 aa10.42□□□□□ -0.74
COL28A1-205ENST00000453441 DDX60LQ5H9U9 1706 aaKnown RBP10.41□□□□□ -0.74
COL28A1-205ENST00000453441 ZMYM6O95789 1325 aa10.41□□□□□ -0.74
COL28A1-205ENST00000453441 CCDC171Q6TFL3 1326 aa10.41□□□□□ -0.74
COL28A1-205ENST00000453441 PATL2C9JE40 543 aaKnown RBP10.41□□□□□ -0.74
COL28A1-205ENST00000453441 C3orf80F5H4A9 247 aa10.41□□□□□ -0.74
COL28A1-205ENST00000453441 EIF5BO60841 1220 aaKnown RBP10.41□□□□□ -0.74
COL28A1-205ENST00000453441 PTPN5P54829 565 aa10.41□□□□□ -0.74
COL28A1-205ENST00000453441 NMIQ13287 307 aaPredicted RBP10.41□□□□□ -0.74
COL28A1-205ENST00000453441 NBPF12Q5TAG4 269 aaPredicted RBP10.41□□□□□ -0.74
COL28A1-205ENST00000453441 METTL16Q86W50 562 aaKnown RBP10.41□□□□□ -0.74
COL28A1-205ENST00000453441 MAPKAPK5Q8IW41 473 aa10.41□□□□□ -0.74
COL28A1-205ENST00000453441 TRIM34Q9BYJ4 488 aa10.41□□□□□ -0.74
COL28A1-205ENST00000453441 ZNF408Q9H9D4 720 aa10.41□□□□□ -0.74
COL28A1-205ENST00000453441 DCP1AQ9NPI6 582 aaPredicted RBP10.41□□□□□ -0.74
COL28A1-205ENST00000453441 GINM1Q9NU53 330 aa10.41□□□□□ -0.74
COL28A1-205ENST00000453441 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.41□□□□□ -0.74
COL28A1-205ENST00000453441 MKRN1Q9UHC7 482 aaKnown RBP10.41□□□□□ -0.74
COL28A1-205ENST00000453441 TLL2Q9Y6L7 1015 aa10.41□□□□□ -0.74
COL28A1-205ENST00000453441 SSC5DA1L4H1 1573 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms