RNA–Protein interactions for RNA: ENST00000449833.6

SHANK2-211, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 8,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-211ENST00000449833 NAPAP54920 295 aa12.84□□□□□ -0.35
SHANK2-211ENST00000449833 NPHP3Q7Z494 1330 aa12.84□□□□□ -0.35
SHANK2-211ENST00000449833 IQCA1LA6NCM1 817 aa12.83□□□□□ -0.35
SHANK2-211ENST00000449833 CALM1P0DP23 149 aa12.83□□□□□ -0.35
SHANK2-211ENST00000449833 CALM2P0DP24 149 aa12.83□□□□□ -0.35
SHANK2-211ENST00000449833 CALM3P0DP25 149 aa12.83□□□□□ -0.35
SHANK2-211ENST00000449833 CCDC15Q0P6D6 951 aa12.83□□□□□ -0.35
SHANK2-211ENST00000449833 WDR44Q5JSH3 913 aa12.83□□□□□ -0.35
SHANK2-211ENST00000449833 DBNLQ9UJU6 430 aaKnown RBP12.83□□□□□ -0.35
SHANK2-211ENST00000449833 CFTRP13569 1480 aa12.83□□□□□ -0.35
SHANK2-211ENST00000449833 PIK3R4Q99570 1358 aa12.83□□□□□ -0.35
SHANK2-211ENST00000449833 DYTNA2CJ06 578 aa12.83□□□□□ -0.36
SHANK2-211ENST00000449833 ATP6V1E1P36543 226 aa12.83□□□□□ -0.36
SHANK2-211ENST00000449833 CTNND2Q9UQB3 1225 aa12.83□□□□□ -0.36
SHANK2-211ENST00000449833 SYNJ2O15056 1496 aa12.83□□□□□ -0.36
SHANK2-211ENST00000449833 RASSF10A6NK89 507 aa12.83□□□□□ -0.36
SHANK2-211ENST00000449833 SERPINB6P35237 376 aa12.83□□□□□ -0.36
SHANK2-211ENST00000449833 SLC8A3P57103 927 aa12.83□□□□□ -0.36
SHANK2-211ENST00000449833 CERS3Q8IU89 383 aa12.83□□□□□ -0.36
SHANK2-211ENST00000449833 NECAB1Q8N987 351 aa12.83□□□□□ -0.36
SHANK2-211ENST00000449833 ZKSCAN3Q9BRR0 538 aa12.83□□□□□ -0.36
SHANK2-211ENST00000449833 BCL2L12Q9HB09 334 aa12.83□□□□□ -0.36
SHANK2-211ENST00000449833 TAF11Q15544 211 aa12.83□□□□□ -0.36
SHANK2-211ENST00000449833 CAPRIN2Q6IMN6 1127 aaKnown RBP12.83□□□□□ -0.36
SHANK2-211ENST00000449833 TXNDC2Q86VQ3 553 aa12.83□□□□□ -0.36
SHANK2-211ENST00000449833 C6orf118Q5T5N4 469 aa12.83□□□□□ -0.36
SHANK2-211ENST00000449833 IQUBQ8NA54 791 aa12.83□□□□□ -0.36
SHANK2-211ENST00000449833 IRX5P78411 483 aaPredicted RBP12.83□□□□□ -0.36
SHANK2-211ENST00000449833 TRMT112Q9UI30 125 aaKnown RBP12.83□□□□□ -0.36
SHANK2-211ENST00000449833 S100BP04271 92 aaPredicted RBP12.83□□□□□ -0.36
SHANK2-211ENST00000449833 MRPS15P82914 257 aaKnown RBP12.83□□□□□ -0.36
SHANK2-211ENST00000449833 DNAJC17Q9NVM6 304 aaKnown RBP12.83□□□□□ -0.36
SHANK2-211ENST00000449833 HGSO14964 777 aaPredicted RBP12.82□□□□□ -0.36
SHANK2-211ENST00000449833 KRT79Q5XKE5 535 aa12.82□□□□□ -0.36
SHANK2-211ENST00000449833 CNNM4Q6P4Q7 775 aa12.82□□□□□ -0.36
SHANK2-211ENST00000449833 PSPC1Q8WXF1 523 aaKnown RBP12.82□□□□□ -0.36
SHANK2-211ENST00000449833 PARVBQ9HBI1 364 aa12.82□□□□□ -0.36
SHANK2-211ENST00000449833 MYH11P35749 1972 aa12.82□□□□□ -0.36
SHANK2-211ENST00000449833 PRDM11Q9NQV5 511 aa12.82□□□□□ -0.36
SHANK2-211ENST00000449833 ZRANB1Q9UGI0 708 aa12.82□□□□□ -0.36
SHANK2-211ENST00000449833 SYNRGQ9UMZ2 1314 aa12.82□□□□□ -0.36
SHANK2-211ENST00000449833 NCAPD3P42695 1498 aa12.82□□□□□ -0.36
SHANK2-211ENST00000449833 EPRSP07814 1512 aaKnown RBP12.82□□□□□ -0.36
SHANK2-211ENST00000449833 KRT15P19012 456 aa12.82□□□□□ -0.36
SHANK2-211ENST00000449833 FANCD2Q9BXW9 1451 aa12.82□□□□□ -0.36
SHANK2-211ENST00000449833 TBC1D8O95759 1140 aa12.82□□□□□ -0.36
SHANK2-211ENST00000449833 CCDC197Q8NCU1 140 aa12.82□□□□□ -0.36
SHANK2-211ENST00000449833 INTS4Q96HW7 963 aaKnown RBP12.82□□□□□ -0.36
SHANK2-211ENST00000449833 TRIM55Q9BYV6 548 aa12.82□□□□□ -0.36
SHANK2-211ENST00000449833 KRT8P05787 483 aa12.82□□□□□ -0.36
SHANK2-211ENST00000449833 CUL3Q13618 768 aa12.82□□□□□ -0.36
SHANK2-211ENST00000449833 MCMDC2Q4G0Z9 681 aa12.82□□□□□ -0.36
SHANK2-211ENST00000449833 SLC30A9Q6PML9 568 aa12.82□□□□□ -0.36
SHANK2-211ENST00000449833 LZICQ8WZA0 190 aa12.82□□□□□ -0.36
SHANK2-211ENST00000449833 ASIC3Q9UHC3 531 aa12.82□□□□□ -0.36
SHANK2-211ENST00000449833 FAM212AQ96EL1 285 aa12.82□□□□□ -0.36
SHANK2-211ENST00000449833 CEP19Q96LK0 163 aa12.82□□□□□ -0.36
SHANK2-211ENST00000449833 ANKFY1Q9P2R3 1169 aa12.82□□□□□ -0.36
SHANK2-211ENST00000449833 MAP3K2Q9Y2U5 619 aa12.82□□□□□ -0.36
SHANK2-211ENST00000449833 RPS6KA2Q15349 733 aa12.82□□□□□ -0.36
SHANK2-211ENST00000449833 NOC4LQ9BVI4 516 aaKnown RBP12.82□□□□□ -0.36
SHANK2-211ENST00000449833 ZNF644Q9H582 1327 aaPredicted RBP12.81□□□□□ -0.36
SHANK2-211ENST00000449833 RGS16O15492 202 aaPredicted RBP12.81□□□□□ -0.36
SHANK2-211ENST00000449833 APOA1P02647 267 aa12.81□□□□□ -0.36
SHANK2-211ENST00000449833 SECISBP2LQ93073 1101 aaKnown RBP12.81□□□□□ -0.36
SHANK2-211ENST00000449833 ZNF653Q96CK0 615 aa12.81□□□□□ -0.36
SHANK2-211ENST00000449833 CNOT10Q9H9A5 744 aaKnown RBP12.81□□□□□ -0.36
SHANK2-211ENST00000449833 B4DLN1 442 aa12.81□□□□□ -0.36
SHANK2-211ENST00000449833 MRPL12P52815 198 aaKnown RBP12.81□□□□□ -0.36
SHANK2-211ENST00000449833 ASIC2Q16515 512 aa12.81□□□□□ -0.36
SHANK2-211ENST00000449833 TRIM8Q9BZR9 551 aa12.81□□□□□ -0.36
SHANK2-211ENST00000449833 CEP70Q8NHQ1 597 aa12.81□□□□□ -0.36
SHANK2-211ENST00000449833 AFG3L2Q9Y4W6 797 aa12.81□□□□□ -0.36
SHANK2-211ENST00000449833 ARIH1Q9Y4X5 557 aaPredicted RBP12.81□□□□□ -0.36
SHANK2-211ENST00000449833 KRT4P19013 534 aa12.81□□□□□ -0.36
SHANK2-211ENST00000449833 GNA11P29992 359 aa12.81□□□□□ -0.36
SHANK2-211ENST00000449833 TADA2BQ86TJ2 420 aa12.81□□□□□ -0.36
SHANK2-211ENST00000449833 PIP4K2CQ8TBX8 421 aa12.81□□□□□ -0.36
SHANK2-211ENST00000449833 PROSER2Q86WR7 435 aaPredicted RBP12.81□□□□□ -0.36
SHANK2-211ENST00000449833 TRIM58Q8NG06 486 aa12.81□□□□□ -0.36
SHANK2-211ENST00000449833 FGD4Q96M96 766 aa12.81□□□□□ -0.36
SHANK2-211ENST00000449833 CROCCQ5TZA2 2017 aa12.81□□□□□ -0.36
SHANK2-211ENST00000449833 ATP5HO75947 161 aa12.81□□□□□ -0.36
SHANK2-211ENST00000449833 SDSP20132 328 aa12.81□□□□□ -0.36
SHANK2-211ENST00000449833 BRF1Q92994 677 aa12.81□□□□□ -0.36
SHANK2-211ENST00000449833 FGFR1OP2Q9NVK5 253 aa12.81□□□□□ -0.36
SHANK2-211ENST00000449833 FBXO2Q9UK22 296 aaPredicted RBP12.81□□□□□ -0.36
SHANK2-211ENST00000449833 HDAC4P56524 1084 aa12.81□□□□□ -0.36
SHANK2-211ENST00000449833 TEX9Q8N6V9 391 aa12.81□□□□□ -0.36
SHANK2-211ENST00000449833 STX2P32856 288 aa12.8□□□□□ -0.36
SHANK2-211ENST00000449833 RASGRF2O14827 1237 aa12.8□□□□□ -0.36
SHANK2-211ENST00000449833 TEX11Q8IYF3 940 aa12.8□□□□□ -0.36
SHANK2-211ENST00000449833 MRRFQ96E11 262 aaKnown RBP12.8□□□□□ -0.36
SHANK2-211ENST00000449833 LOC102724159A0A0B4J2E5 919 aa12.8□□□□□ -0.36
SHANK2-211ENST00000449833 PWP2Q15269 919 aaKnown RBP12.8□□□□□ -0.36
SHANK2-211ENST00000449833 CCDC125Q86Z20 511 aa12.8□□□□□ -0.36
SHANK2-211ENST00000449833 WWC3Q9ULE0 1092 aa12.8□□□□□ -0.36
SHANK2-211ENST00000449833 F6X3S4 739 aa12.8□□□□□ -0.36
SHANK2-211ENST00000449833 CALUO43852 315 aaPredicted RBP12.8□□□□□ -0.36
SHANK2-211ENST00000449833 UQCRFS1P1P0C7P4 283 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms