RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 ATP8A2Q9NTI2 1148 aa16.3■□□□□ 0.2
NCLP1-201ENST00000445357 RBM28Q9NW13 759 aaKnown RBP16.3■□□□□ 0.2
NCLP1-201ENST00000445357 TFCP2L1Q9NZI6 479 aa16.3■□□□□ 0.2
NCLP1-201ENST00000445357 NRBP1Q9UHY1 535 aa16.3■□□□□ 0.2
NCLP1-201ENST00000445357 KCNJ14Q9UNX9 436 aa16.3■□□□□ 0.2
NCLP1-201ENST00000445357 USP17L12C9JPN9 530 aa16.29■□□□□ 0.2
NCLP1-201ENST00000445357 USP17L21D6R901 530 aa16.29■□□□□ 0.2
NCLP1-201ENST00000445357 DDAH1O94760 285 aa16.29■□□□□ 0.2
NCLP1-201ENST00000445357 KRI1Q8N9T8 703 aaKnown RBP16.29■□□□□ 0.2
NCLP1-201ENST00000445357 PRIMPOLQ96LW4 560 aa16.29■□□□□ 0.2
NCLP1-201ENST00000445357 DCP1AQ9NPI6 582 aaPredicted RBP16.29■□□□□ 0.2
NCLP1-201ENST00000445357 UQCRHLA0A096LP55 91 aa16.29■□□□□ 0.2
NCLP1-201ENST00000445357 PRPF3O43395 683 aaKnown RBP16.29■□□□□ 0.2
NCLP1-201ENST00000445357 UQCRHP07919 91 aa16.29■□□□□ 0.2
NCLP1-201ENST00000445357 TROAPQ12815 778 aa16.29■□□□□ 0.2
NCLP1-201ENST00000445357 IFIT1BQ5T764 474 aaKnown RBP16.29■□□□□ 0.2
NCLP1-201ENST00000445357 CATIPQ7Z7H3 387 aa16.29■□□□□ 0.2
NCLP1-201ENST00000445357 UPF1Q92900 1129 aaKnown RBP eCLIP16.29■□□□□ 0.2
NCLP1-201ENST00000445357 ARPP21Q9UBL0 812 aaPredicted RBP16.29■□□□□ 0.2
NCLP1-201ENST00000445357 NAV1Q8NEY1 1877 aa16.28■□□□□ 0.2
NCLP1-201ENST00000445357 PTPREP23469 700 aa16.28■□□□□ 0.2
NCLP1-201ENST00000445357 PRDX5P30044 214 aa16.28■□□□□ 0.2
NCLP1-201ENST00000445357 NT5C2P49902 561 aa16.28■□□□□ 0.2
NCLP1-201ENST00000445357 CCDC144BQ3MJ40 725 aa16.28■□□□□ 0.2
NCLP1-201ENST00000445357 DNTTIP2Q5QJE6 756 aaKnown RBP16.28■□□□□ 0.2
NCLP1-201ENST00000445357 SPTY2D1Q68D10 685 aaPredicted RBP16.28■□□□□ 0.2
NCLP1-201ENST00000445357 CMTR1Q8N1G2 835 aaKnown RBP16.28■□□□□ 0.2
NCLP1-201ENST00000445357 CCDC24Q8N4L8 307 aa16.28■□□□□ 0.2
NCLP1-201ENST00000445357 CLIC6Q96NY7 704 aa16.28■□□□□ 0.2
NCLP1-201ENST00000445357 AATFQ9NY61 560 aaKnown RBP eCLIP16.28■□□□□ 0.2
NCLP1-201ENST00000445357 FBXO2Q9UK22 296 aaPredicted RBP16.28■□□□□ 0.2
NCLP1-201ENST00000445357 NEMFO60524 1076 aa16.27■□□□□ 0.2
NCLP1-201ENST00000445357 RFC4P35249 363 aa16.27■□□□□ 0.2
NCLP1-201ENST00000445357 CHAF1AQ13111 956 aaPredicted RBP16.27■□□□□ 0.2
NCLP1-201ENST00000445357 GRAPQ13588 217 aa16.27■□□□□ 0.2
NCLP1-201ENST00000445357 PKN1Q16512 942 aa16.27■□□□□ 0.2
NCLP1-201ENST00000445357 TRAPPC3LQ5T215 181 aa16.27■□□□□ 0.2
NCLP1-201ENST00000445357 TXNRD3Q86VQ6 643 aa16.27■□□□□ 0.2
NCLP1-201ENST00000445357 ZNF579Q8NAF0 562 aaKnown RBP16.27■□□□□ 0.2
NCLP1-201ENST00000445357 GRAPLQ8TC17 118 aaPredicted RBP16.27■□□□□ 0.2
NCLP1-201ENST00000445357 LEMD3Q9Y2U8 911 aa16.27■□□□□ 0.2
NCLP1-201ENST00000445357 IKBKBO14920 756 aa16.27■□□□□ 0.19
NCLP1-201ENST00000445357 XBP1P17861 261 aa16.27■□□□□ 0.19
NCLP1-201ENST00000445357 AKAP17AQ02040 695 aaKnown RBP16.27■□□□□ 0.19
NCLP1-201ENST00000445357 LRMPQ12912 555 aa16.27■□□□□ 0.19
NCLP1-201ENST00000445357 KRBA2Q6ZNG9 492 aa16.27■□□□□ 0.19
NCLP1-201ENST00000445357 CCDC82Q8N4S0 544 aa16.27■□□□□ 0.19
NCLP1-201ENST00000445357 CACTINQ8WUQ7 758 aaKnown RBP16.27■□□□□ 0.19
NCLP1-201ENST00000445357 TAOK2Q9UL54 1235 aa16.27■□□□□ 0.19
NCLP1-201ENST00000445357 KCNH3Q9ULD8 1083 aa16.27■□□□□ 0.19
NCLP1-201ENST00000445357 CDK5RAP2Q96SN8 1893 aa16.26■□□□□ 0.19
NCLP1-201ENST00000445357 PRDM1O75626 825 aa16.26■□□□□ 0.19
NCLP1-201ENST00000445357 NR5A1Q13285 461 aa16.26■□□□□ 0.19
NCLP1-201ENST00000445357 NFIXQ14938 502 aa16.26■□□□□ 0.19
NCLP1-201ENST00000445357 NCAPHQ15003 741 aa16.26■□□□□ 0.19
NCLP1-201ENST00000445357 FAM182BQ5T319 152 aa16.26■□□□□ 0.19
NCLP1-201ENST00000445357 C15orf52Q6ZUT6 534 aaKnown RBP16.26■□□□□ 0.19
NCLP1-201ENST00000445357 SEPT12Q8IYM1 358 aa16.26■□□□□ 0.19
NCLP1-201ENST00000445357 MYRIPQ8NFW9 859 aa16.26■□□□□ 0.19
NCLP1-201ENST00000445357 SHISA4Q96DD7 197 aa16.26■□□□□ 0.19
NCLP1-201ENST00000445357 PHF20Q9BVI0 1012 aa16.26■□□□□ 0.19
NCLP1-201ENST00000445357 CEP131Q9UPN4 1083 aa16.26■□□□□ 0.19
NCLP1-201ENST00000445357 EP400Q96L91 3159 aa16.26■□□□□ 0.19
NCLP1-201ENST00000445357 SMTNL1A8MU46 457 aa16.26■□□□□ 0.19
NCLP1-201ENST00000445357 DYNC1I1O14576 645 aa16.26■□□□□ 0.19
NCLP1-201ENST00000445357 TMTC3Q6ZXV5 915 aa16.26■□□□□ 0.19
NCLP1-201ENST00000445357 OXER1Q8TDS5 423 aa16.26■□□□□ 0.19
NCLP1-201ENST00000445357 BIN1O00499 593 aa16.25■□□□□ 0.19
NCLP1-201ENST00000445357 ONECUT3O60422 494 aaPredicted RBP16.25■□□□□ 0.19
NCLP1-201ENST00000445357 TPM4P67936 248 aa16.25■□□□□ 0.19
NCLP1-201ENST00000445357 METTL16Q86W50 562 aaKnown RBP16.25■□□□□ 0.19
NCLP1-201ENST00000445357 LRRC8AQ8IWT6 810 aa16.25■□□□□ 0.19
NCLP1-201ENST00000445357 CNBD1Q8NA66 436 aa16.25■□□□□ 0.19
NCLP1-201ENST00000445357 WDR66Q8TBY9 1149 aa16.25■□□□□ 0.19
NCLP1-201ENST00000445357 FBXW7Q969H0 707 aa16.25■□□□□ 0.19
NCLP1-201ENST00000445357 NOL10Q9BSC4 688 aaKnown RBP16.25■□□□□ 0.19
NCLP1-201ENST00000445357 SRPRBQ9Y5M8 271 aaKnown RBP16.25■□□□□ 0.19
NCLP1-201ENST00000445357 ROBO3Q96MS0 1386 aa16.25■□□□□ 0.19
NCLP1-201ENST00000445357 XDHP47989 1333 aa16.24■□□□□ 0.19
NCLP1-201ENST00000445357 CNTNAP5Q8WYK1 1306 aa16.24■□□□□ 0.19
NCLP1-201ENST00000445357 PLEKHA8P1O95397 391 aa16.24■□□□□ 0.19
NCLP1-201ENST00000445357 LONRF3Q496Y0 759 aa16.24■□□□□ 0.19
NCLP1-201ENST00000445357 FAM196AQ6ZSG2 479 aa16.24■□□□□ 0.19
NCLP1-201ENST00000445357 DZIP1Q86YF9 867 aaKnown RBP16.24■□□□□ 0.19
NCLP1-201ENST00000445357 FAM13BQ9NYF5 915 aa16.24■□□□□ 0.19
NCLP1-201ENST00000445357 PCDHB6Q9Y5E3 794 aa16.24■□□□□ 0.19
NCLP1-201ENST00000445357 KRT2P35908 639 aa16.24■□□□□ 0.19
NCLP1-201ENST00000445357 EVX2Q03828 476 aa16.24■□□□□ 0.19
NCLP1-201ENST00000445357 PDE4BQ07343 736 aa16.24■□□□□ 0.19
NCLP1-201ENST00000445357 PNOCQ13519 176 aa16.24■□□□□ 0.19
NCLP1-201ENST00000445357 CNNM3Q8NE01 707 aa16.24■□□□□ 0.19
NCLP1-201ENST00000445357 OSBPL5Q9H0X9 879 aaPredicted RBP16.24■□□□□ 0.19
NCLP1-201ENST00000445357 VPS54Q9P1Q0 977 aa16.24■□□□□ 0.19
NCLP1-201ENST00000445357 IMPACTQ9P2X3 320 aa16.24■□□□□ 0.19
NCLP1-201ENST00000445357 MKRN1Q9UHC7 482 aaKnown RBP16.24■□□□□ 0.19
NCLP1-201ENST00000445357 NPHP1O15259 732 aa16.23■□□□□ 0.19
NCLP1-201ENST00000445357 CYP2D6P10635 497 aa16.23■□□□□ 0.19
NCLP1-201ENST00000445357 GTF2F1P35269 517 aaKnown RBP eCLIP16.23■□□□□ 0.19
NCLP1-201ENST00000445357 GSDMDP57764 484 aa16.23■□□□□ 0.19
NCLP1-201ENST00000445357 MDM2Q00987 491 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms