RNA–Protein interactions for RNA: ENST00000439445.5

CCDC66-207, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 709 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-207ENST00000439445 FAM205CA6NFA0 338 aa12.12□□□□□ -0.47
CCDC66-207ENST00000439445 FARP2O94887 1054 aaPredicted RBP12.12□□□□□ -0.47
CCDC66-207ENST00000439445 SGPL1O95470 568 aa12.12□□□□□ -0.47
CCDC66-207ENST00000439445 TFRCP02786 760 aaKnown RBP12.12□□□□□ -0.47
CCDC66-207ENST00000439445 SPP2Q13103 211 aa12.12□□□□□ -0.47
CCDC66-207ENST00000439445 MTX1Q13505 466 aa12.12□□□□□ -0.47
CCDC66-207ENST00000439445 PI16Q6UXB8 463 aa12.12□□□□□ -0.47
CCDC66-207ENST00000439445 UBE2Q1Q7Z7E8 422 aa12.12□□□□□ -0.47
CCDC66-207ENST00000439445 ANKRD13CQ8N6S4 541 aa12.12□□□□□ -0.47
CCDC66-207ENST00000439445 ZNF384Q8TF68 577 aa12.12□□□□□ -0.47
CCDC66-207ENST00000439445 ARHGAP45Q92619 1136 aa12.12□□□□□ -0.47
CCDC66-207ENST00000439445 COA7Q96BR5 231 aa12.12□□□□□ -0.47
CCDC66-207ENST00000439445 DEFB118Q96PH6 123 aa12.12□□□□□ -0.47
CCDC66-207ENST00000439445 RAI14Q9P0K7 980 aa12.12□□□□□ -0.47
CCDC66-207ENST00000439445 AGTPBP1Q9UPW5 1226 aa12.12□□□□□ -0.47
CCDC66-207ENST00000439445 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.12□□□□□ -0.47
CCDC66-207ENST00000439445 MAP4K4O95819 1239 aaPredicted RBP12.11□□□□□ -0.47
CCDC66-207ENST00000439445 INHAP05111 366 aa12.11□□□□□ -0.47
CCDC66-207ENST00000439445 G3BP1Q13283 466 aaKnown RBP eCLIP12.11□□□□□ -0.47
CCDC66-207ENST00000439445 IRF5Q13568 498 aa12.11□□□□□ -0.47
CCDC66-207ENST00000439445 TREML2Q5T2D2 321 aa12.11□□□□□ -0.47
CCDC66-207ENST00000439445 PXYLP1Q8TE99 480 aa12.11□□□□□ -0.47
CCDC66-207ENST00000439445 NSUN4Q96CB9 384 aaKnown RBP12.11□□□□□ -0.47
CCDC66-207ENST00000439445 HS3ST6Q96QI5 342 aa12.11□□□□□ -0.47
CCDC66-207ENST00000439445 OSBPL5Q9H0X9 879 aaPredicted RBP12.11□□□□□ -0.47
CCDC66-207ENST00000439445 LRP2BPQ9P2M1 347 aa12.11□□□□□ -0.47
CCDC66-207ENST00000439445 RBM27Q9P2N5 1060 aaKnown RBP12.11□□□□□ -0.47
CCDC66-207ENST00000439445 PNMA3Q9UL41 463 aa12.11□□□□□ -0.47
CCDC66-207ENST00000439445 PHIPQ8WWQ0 1821 aa12.11□□□□□ -0.47
CCDC66-207ENST00000439445 IPO8O15397 1037 aaKnown RBP12.1□□□□□ -0.47
CCDC66-207ENST00000439445 GNAI2P04899 355 aa12.1□□□□□ -0.47
CCDC66-207ENST00000439445 CAP2P40123 477 aa12.1□□□□□ -0.47
CCDC66-207ENST00000439445 TEX11Q8IYF3 940 aa12.1□□□□□ -0.47
CCDC66-207ENST00000439445 PROCA1Q8NCQ7 364 aaPredicted RBP12.1□□□□□ -0.47
CCDC66-207ENST00000439445 ZNF280CQ8ND82 737 aa12.1□□□□□ -0.47
CCDC66-207ENST00000439445 NOL10Q9BSC4 688 aaKnown RBP12.1□□□□□ -0.47
CCDC66-207ENST00000439445 USP17L5A8MUK1 530 aa12.09□□□□□ -0.47
CCDC66-207ENST00000439445 EVI5O60447 810 aa12.09□□□□□ -0.47
CCDC66-207ENST00000439445 UQCRFS1P1P0C7P4 283 aa12.09□□□□□ -0.47
CCDC66-207ENST00000439445 CAPN2P17655 700 aa12.09□□□□□ -0.47
CCDC66-207ENST00000439445 ARID4AP29374 1257 aaPredicted RBP12.09□□□□□ -0.47
CCDC66-207ENST00000439445 GCLCP48506 637 aaPredicted RBP12.09□□□□□ -0.47
CCDC66-207ENST00000439445 HMGCS2P54868 508 aa12.09□□□□□ -0.47
CCDC66-207ENST00000439445 PABPC4Q13310 644 aaKnown RBP eCLIP12.09□□□□□ -0.47
CCDC66-207ENST00000439445 FAM110CQ1W6H9 321 aa12.09□□□□□ -0.47
CCDC66-207ENST00000439445 FRAT1Q92837 279 aaPredicted RBP12.09□□□□□ -0.47
CCDC66-207ENST00000439445 PNMA6EA0A0J9YXQ4 647 aa12.08□□□□□ -0.48
CCDC66-207ENST00000439445 ZBTB7BO15156 539 aaPredicted RBP12.08□□□□□ -0.48
CCDC66-207ENST00000439445 MCAMP43121 646 aa12.08□□□□□ -0.48
CCDC66-207ENST00000439445 RRP1BQ14684 758 aaKnown RBP12.08□□□□□ -0.48
CCDC66-207ENST00000439445 GPR153Q6NV75 609 aa12.08□□□□□ -0.48
CCDC66-207ENST00000439445 SH3RF3Q8TEJ3 882 aaPredicted RBP12.08□□□□□ -0.48
CCDC66-207ENST00000439445 CLUAP1Q96AJ1 413 aa12.08□□□□□ -0.48
CCDC66-207ENST00000439445 TBC1D2Q9BYX2 928 aa12.08□□□□□ -0.48
CCDC66-207ENST00000439445 ASCC2Q9H1I8 757 aaPredicted RBP12.08□□□□□ -0.48
CCDC66-207ENST00000439445 SNRKQ9NRH2 765 aa12.08□□□□□ -0.48
CCDC66-207ENST00000439445 PI4KBQ9UBF8 816 aa12.08□□□□□ -0.48
CCDC66-207ENST00000439445 HERC5Q9UII4 1024 aaKnown RBP12.08□□□□□ -0.48
CCDC66-207ENST00000439445 TNNQ9UQP3 1299 aa12.08□□□□□ -0.48
CCDC66-207ENST00000439445 BAG3O95817 575 aa12.07□□□□□ -0.48
CCDC66-207ENST00000439445 TRIM27P14373 513 aa12.07□□□□□ -0.48
CCDC66-207ENST00000439445 NAA16Q6N069 864 aaPredicted RBP12.07□□□□□ -0.48
CCDC66-207ENST00000439445 ATF7IPQ6VMQ6 1270 aa12.07□□□□□ -0.48
CCDC66-207ENST00000439445 DNAH12Q6ZR08 3092 aa12.07□□□□□ -0.48
CCDC66-207ENST00000439445 PAWRQ96IZ0 340 aaKnown RBP12.07□□□□□ -0.48
CCDC66-207ENST00000439445 CRISPLD2Q9H0B8 497 aa12.07□□□□□ -0.48
CCDC66-207ENST00000439445 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.07□□□□□ -0.48
CCDC66-207ENST00000439445 DHX36Q9H2U1 1008 aaKnown RBP12.07□□□□□ -0.48
CCDC66-207ENST00000439445 AS3MTQ9HBK9 375 aa12.07□□□□□ -0.48
CCDC66-207ENST00000439445 PAK6Q9NQU5 681 aaPredicted RBP12.07□□□□□ -0.48
CCDC66-207ENST00000439445 AATFQ9NY61 560 aaKnown RBP eCLIP12.07□□□□□ -0.48
CCDC66-207ENST00000439445 LAMA3Q16787 3333 aa12.07□□□□□ -0.48
CCDC66-207ENST00000439445 COL2A1P02458 1487 aaPredicted RBP12.07□□□□□ -0.48
CCDC66-207ENST00000439445 ATAD5Q96QE3 1844 aa12.07□□□□□ -0.48
CCDC66-207ENST00000439445 COL6A3P12111 3177 aa12.06□□□□□ -0.48
CCDC66-207ENST00000439445 GTPBP6O43824 516 aaPredicted RBP12.06□□□□□ -0.48
CCDC66-207ENST00000439445 BCAR3O75815 825 aa12.06□□□□□ -0.48
CCDC66-207ENST00000439445 ASNSP08243 561 aa12.06□□□□□ -0.48
CCDC66-207ENST00000439445 OS9Q13438 667 aaPredicted RBP12.06□□□□□ -0.48
CCDC66-207ENST00000439445 SH3D19Q5HYK7 790 aa12.06□□□□□ -0.48
CCDC66-207ENST00000439445 CCDC158Q5M9N0 1113 aa12.06□□□□□ -0.48
CCDC66-207ENST00000439445 TTC39AQ5SRH9 613 aa12.06□□□□□ -0.48
CCDC66-207ENST00000439445 NECAB2Q7Z6G3 386 aa12.06□□□□□ -0.48
CCDC66-207ENST00000439445 MAPKAPK5Q8IW41 473 aa12.06□□□□□ -0.48
CCDC66-207ENST00000439445 CRACR2BQ8N4Y2 399 aaPredicted RBP12.06□□□□□ -0.48
CCDC66-207ENST00000439445 TGFBRAP1Q8WUH2 860 aa12.06□□□□□ -0.48
CCDC66-207ENST00000439445 PRO3102Q9H379 93 aa12.06□□□□□ -0.48
CCDC66-207ENST00000439445 TMOD4Q9NZQ9 345 aa12.06□□□□□ -0.48
CCDC66-207ENST00000439445 HMGCRP04035 888 aa12.05□□□□□ -0.48
CCDC66-207ENST00000439445 BACE1P56817 501 aa12.05□□□□□ -0.48
CCDC66-207ENST00000439445 IRX3P78415 501 aaPredicted RBP12.05□□□□□ -0.48
CCDC66-207ENST00000439445 MTMR2Q13614 643 aa12.05□□□□□ -0.48
CCDC66-207ENST00000439445 FOXP4Q8IVH2 680 aaPredicted RBP12.05□□□□□ -0.48
CCDC66-207ENST00000439445 DBNDD2Q9BQY9 259 aa12.05□□□□□ -0.48
CCDC66-207ENST00000439445 WDR18Q9BV38 432 aa12.05□□□□□ -0.48
CCDC66-207ENST00000439445 TRIM34Q9BYJ4 488 aa12.05□□□□□ -0.48
CCDC66-207ENST00000439445 HMX1Q9NP08 348 aaPredicted RBP12.05□□□□□ -0.48
CCDC66-207ENST00000439445 RTN4Q9NQC3 1192 aaKnown RBP12.05□□□□□ -0.48
CCDC66-207ENST00000439445 GJD2Q9UKL4 321 aa12.05□□□□□ -0.48
CCDC66-207ENST00000439445 PALD1Q9ULE6 856 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 306.8 ms