RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 SLC4A4Q9Y6R1 1079 aa20.96■□□□□ 0.95
CTSD-203ENST00000429746 ZHX2Q9Y6X8 837 aa20.96■□□□□ 0.95
CTSD-203ENST00000429746 BTBD19C9JJ37 291 aa20.95■□□□□ 0.94
CTSD-203ENST00000429746 HLA-DOAP06340 250 aa20.95■□□□□ 0.94
CTSD-203ENST00000429746 C12orf60Q5U649 245 aa20.95■□□□□ 0.94
CTSD-203ENST00000429746 GPAT2Q6NUI2 795 aa20.95■□□□□ 0.94
CTSD-203ENST00000429746 CTR9Q6PD62 1173 aa20.95■□□□□ 0.94
CTSD-203ENST00000429746 TTC6Q86TZ1 520 aa20.95■□□□□ 0.94
CTSD-203ENST00000429746 SLC44A5Q8NCS7 719 aa20.95■□□□□ 0.94
CTSD-203ENST00000429746 A0A0D9SFI3 127 aa20.94■□□□□ 0.94
CTSD-203ENST00000429746 A0A0G2JLL6 359 aaPredicted RBP20.94■□□□□ 0.94
CTSD-203ENST00000429746 USP17L12C9JPN9 530 aa20.94■□□□□ 0.94
CTSD-203ENST00000429746 USP17L21D6R901 530 aa20.94■□□□□ 0.94
CTSD-203ENST00000429746 CXCL11O14625 94 aa20.94■□□□□ 0.94
CTSD-203ENST00000429746 FKTNO75072 461 aa20.94■□□□□ 0.94
CTSD-203ENST00000429746 GDF11O95390 407 aa20.94■□□□□ 0.94
CTSD-203ENST00000429746 GUCY1A2P33402 732 aa20.94■□□□□ 0.94
CTSD-203ENST00000429746 SNAPC2Q13487 334 aa20.94■□□□□ 0.94
CTSD-203ENST00000429746 CCDC129Q6ZRS4 1044 aa20.94■□□□□ 0.94
CTSD-203ENST00000429746 PRRT2Q7Z6L0 340 aaPredicted RBP20.94■□□□□ 0.94
CTSD-203ENST00000429746 TICAM2Q86XR7 235 aa20.94■□□□□ 0.94
CTSD-203ENST00000429746 DYNLL2Q96FJ2 89 aa20.94■□□□□ 0.94
CTSD-203ENST00000429746 FAM227BQ96M60 508 aa20.94■□□□□ 0.94
CTSD-203ENST00000429746 ZBTB21Q9ULJ3 1066 aa20.94■□□□□ 0.94
CTSD-203ENST00000429746 CETPP11597 493 aa20.93■□□□□ 0.94
CTSD-203ENST00000429746 PICK1Q9NRD5 415 aa20.93■□□□□ 0.94
CTSD-203ENST00000429746 ROBO3Q96MS0 1386 aa20.93■□□□□ 0.94
CTSD-203ENST00000429746 CAP1Q01518 475 aa20.92■□□□□ 0.94
CTSD-203ENST00000429746 CRHR2Q13324 411 aa20.92■□□□□ 0.94
CTSD-203ENST00000429746 SBK1Q52WX2 424 aa20.92■□□□□ 0.94
CTSD-203ENST00000429746 GIMAP6Q6P9H5 292 aa20.92■□□□□ 0.94
CTSD-203ENST00000429746 SKAP1Q86WV1 359 aa20.92■□□□□ 0.94
CTSD-203ENST00000429746 CRACR2BQ8N4Y2 399 aaPredicted RBP20.92■□□□□ 0.94
CTSD-203ENST00000429746 ADGRA2Q96PE1 1338 aa20.92■□□□□ 0.94
CTSD-203ENST00000429746 POLR3DP05423 398 aaPredicted RBP20.91■□□□□ 0.94
CTSD-203ENST00000429746 TTC22Q5TAA0 569 aa20.91■□□□□ 0.94
CTSD-203ENST00000429746 VPS53Q5VIR6 699 aa20.91■□□□□ 0.94
CTSD-203ENST00000429746 ZNF589Q86UQ0 364 aaPredicted RBP20.91■□□□□ 0.94
CTSD-203ENST00000429746 WDR18Q9BV38 432 aa20.91■□□□□ 0.94
CTSD-203ENST00000429746 ZSWIM8A7E2V4 1837 aa20.9■□□□□ 0.94
CTSD-203ENST00000429746 GH2P01242 217 aa20.9■□□□□ 0.94
CTSD-203ENST00000429746 ASNSP08243 561 aa20.9■□□□□ 0.94
CTSD-203ENST00000429746 NMIQ13287 307 aaPredicted RBP20.9■□□□□ 0.94
CTSD-203ENST00000429746 LRRFIP1Q32MZ4 808 aaKnown RBP20.9■□□□□ 0.94
CTSD-203ENST00000429746 C16orf86Q6ZW13 317 aa20.9■□□□□ 0.94
CTSD-203ENST00000429746 ANKRD23Q86SG2 305 aa20.9■□□□□ 0.94
CTSD-203ENST00000429746 ZCCHC17Q9NP64 241 aaKnown RBP20.9■□□□□ 0.94
CTSD-203ENST00000429746 GINM1Q9NU53 330 aa20.9■□□□□ 0.94
CTSD-203ENST00000429746 TRIM75PA6NK02 468 aa20.89■□□□□ 0.93
CTSD-203ENST00000429746 USP17L5A8MUK1 530 aa20.89■□□□□ 0.93
CTSD-203ENST00000429746 PATL2C9JE40 543 aaKnown RBP20.89■□□□□ 0.93
CTSD-203ENST00000429746 SDSP20132 328 aa20.89■□□□□ 0.93
CTSD-203ENST00000429746 SPP2Q13103 211 aa20.89■□□□□ 0.93
CTSD-203ENST00000429746 SH3D19Q5HYK7 790 aa20.89■□□□□ 0.93
CTSD-203ENST00000429746 IFNL3Q8IZI9 196 aa20.89■□□□□ 0.93
CTSD-203ENST00000429746 ZNF280CQ8ND82 737 aa20.89■□□□□ 0.93
CTSD-203ENST00000429746 IL25Q9H293 177 aa20.89■□□□□ 0.93
CTSD-203ENST00000429746 HELLSQ9NRZ9 838 aa20.89■□□□□ 0.93
CTSD-203ENST00000429746 ARPP21Q9UBL0 812 aaPredicted RBP20.89■□□□□ 0.93
CTSD-203ENST00000429746 TAOK2Q9UL54 1235 aa20.89■□□□□ 0.93
CTSD-203ENST00000429746 TRIM6-TRIM34B2RNG4 842 aa20.88■□□□□ 0.93
CTSD-203ENST00000429746 GNAT2P19087 354 aa20.88■□□□□ 0.93
CTSD-203ENST00000429746 CDK8P49336 464 aa20.88■□□□□ 0.93
CTSD-203ENST00000429746 MLLT1Q03111 559 aaPredicted RBP20.88■□□□□ 0.93
CTSD-203ENST00000429746 CERKLQ49MI3 558 aaPredicted RBP20.88■□□□□ 0.93
CTSD-203ENST00000429746 FBXO46Q6PJ61 603 aaPredicted RBP20.88■□□□□ 0.93
CTSD-203ENST00000429746 RILPL2Q969X0 211 aa20.88■□□□□ 0.93
CTSD-203ENST00000429746 TACC3Q9Y6A5 838 aa20.88■□□□□ 0.93
CTSD-203ENST00000429746 TREML2Q5T2D2 321 aa20.87■□□□□ 0.93
CTSD-203ENST00000429746 CENPQQ7L2Z9 268 aaPredicted RBP20.87■□□□□ 0.93
CTSD-203ENST00000429746 SIAH1Q8IUQ4 282 aa20.87■□□□□ 0.93
CTSD-203ENST00000429746 ERO1AQ96HE7 468 aa20.87■□□□□ 0.93
CTSD-203ENST00000429746 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.87■□□□□ 0.93
CTSD-203ENST00000429746 TBC1D2Q9BYX2 928 aa20.87■□□□□ 0.93
CTSD-203ENST00000429746 AKR1B1P15121 316 aa20.86■□□□□ 0.93
CTSD-203ENST00000429746 TRIM34Q9BYJ4 488 aa20.86■□□□□ 0.93
CTSD-203ENST00000429746 SWAP70Q9UH65 585 aa20.86■□□□□ 0.93
CTSD-203ENST00000429746 PDHXO00330 501 aa20.85■□□□□ 0.93
CTSD-203ENST00000429746 BACE1P56817 501 aa20.85■□□□□ 0.93
CTSD-203ENST00000429746 TAF1CQ15572 869 aaPredicted RBP20.85■□□□□ 0.93
CTSD-203ENST00000429746 ABCB5Q2M3G0 1257 aa20.85■□□□□ 0.93
CTSD-203ENST00000429746 MCMDC2Q4G0Z9 681 aa20.85■□□□□ 0.93
CTSD-203ENST00000429746 ACER1Q8TDN7 264 aa20.85■□□□□ 0.93
CTSD-203ENST00000429746 HPS5Q9UPZ3 1129 aa20.85■□□□□ 0.93
CTSD-203ENST00000429746 PDE4DIPQ5VU43 2346 aa20.85■□□□□ 0.93
CTSD-203ENST00000429746 RLFQ13129 1914 aa20.84■□□□□ 0.93
CTSD-203ENST00000429746 LAMA4Q16363 1823 aa20.84■□□□□ 0.93
CTSD-203ENST00000429746 A0A1W2PRG0 241 aa20.84■□□□□ 0.93
CTSD-203ENST00000429746 RASA1P20936 1047 aa20.84■□□□□ 0.93
CTSD-203ENST00000429746 HMGCS2P54868 508 aa20.84■□□□□ 0.93
CTSD-203ENST00000429746 MTMR2Q13614 643 aa20.84■□□□□ 0.93
CTSD-203ENST00000429746 SEPT2Q15019 361 aa20.84■□□□□ 0.93
CTSD-203ENST00000429746 ARHGEF6Q15052 776 aa20.84■□□□□ 0.93
CTSD-203ENST00000429746 CLEC10AQ8IUN9 316 aa20.84■□□□□ 0.93
CTSD-203ENST00000429746 PROCA1Q8NCQ7 364 aaPredicted RBP20.84■□□□□ 0.93
CTSD-203ENST00000429746 ZFYVE28Q9HCC9 887 aa20.84■□□□□ 0.93
CTSD-203ENST00000429746 EMILIN3Q9NT22 766 aa20.84■□□□□ 0.93
CTSD-203ENST00000429746 AGTPBP1Q9UPW5 1226 aa20.84■□□□□ 0.93
CTSD-203ENST00000429746 SLC45A1Q9Y2W3 748 aa20.84■□□□□ 0.93
CTSD-203ENST00000429746 CENPFP49454 3210 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms