RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 VEGFAP15692 232 aaPredicted RBP13.31□□□□□ -0.28
UBR4-207ENST00000425413 KRI1Q8N9T8 703 aaKnown RBP13.31□□□□□ -0.28
UBR4-207ENST00000425413 BRIP1Q9BX63 1249 aa13.31□□□□□ -0.28
UBR4-207ENST00000425413 IFNKQ9P0W0 207 aa13.31□□□□□ -0.28
UBR4-207ENST00000425413 ARAP2Q8WZ64 1704 aa13.31□□□□□ -0.28
UBR4-207ENST00000425413 MYH15Q9Y2K3 1946 aa13.31□□□□□ -0.28
UBR4-207ENST00000425413 BAZ2AQ9UIF9 1905 aaKnown RBP13.31□□□□□ -0.28
UBR4-207ENST00000425413 PPP6R2O75170 966 aa13.31□□□□□ -0.28
UBR4-207ENST00000425413 TPM3P06753 285 aa13.31□□□□□ -0.28
UBR4-207ENST00000425413 SAP30BPQ9UHR5 308 aaKnown RBP13.31□□□□□ -0.28
UBR4-207ENST00000425413 ANAPC4Q9UJX5 808 aa13.31□□□□□ -0.28
UBR4-207ENST00000425413 POLR2DO15514 142 aaKnown RBP13.3□□□□□ -0.28
UBR4-207ENST00000425413 ATP1A3P13637 1013 aa13.3□□□□□ -0.28
UBR4-207ENST00000425413 USP5P45974 858 aa13.3□□□□□ -0.28
UBR4-207ENST00000425413 TERF1P54274 439 aa13.3□□□□□ -0.28
UBR4-207ENST00000425413 NLRP12P59046 1061 aa13.3□□□□□ -0.28
UBR4-207ENST00000425413 ZNF827Q17R98 1081 aa13.3□□□□□ -0.28
UBR4-207ENST00000425413 RESP18Q5W5W9 173 aa13.3□□□□□ -0.28
UBR4-207ENST00000425413 METTL16Q86W50 562 aaKnown RBP13.3□□□□□ -0.28
UBR4-207ENST00000425413 FOXP4Q8IVH2 680 aaPredicted RBP13.3□□□□□ -0.28
UBR4-207ENST00000425413 SLC44A5Q8NCS7 719 aa13.3□□□□□ -0.28
UBR4-207ENST00000425413 SPTLC3Q9NUV7 552 aa13.3□□□□□ -0.28
UBR4-207ENST00000425413 WNT7AO00755 349 aa13.29□□□□□ -0.28
UBR4-207ENST00000425413 CUTAO60888 179 aa13.29□□□□□ -0.28
UBR4-207ENST00000425413 PKN1Q16512 942 aa13.29□□□□□ -0.28
UBR4-207ENST00000425413 SH3RF3Q8TEJ3 882 aaPredicted RBP13.29□□□□□ -0.28
UBR4-207ENST00000425413 XPO4Q9C0E2 1151 aaKnown RBP13.29□□□□□ -0.28
UBR4-207ENST00000425413 PDCL3Q9H2J4 239 aa13.29□□□□□ -0.28
UBR4-207ENST00000425413 HPSEQ9Y251 543 aa13.29□□□□□ -0.28
UBR4-207ENST00000425413 PCDHA5Q9Y5H7 936 aa13.29□□□□□ -0.28
UBR4-207ENST00000425413 DOCK2Q92608 1830 aa13.29□□□□□ -0.28
UBR4-207ENST00000425413 LDHBP07195 334 aaKnown RBP13.29□□□□□ -0.28
UBR4-207ENST00000425413 TROAPQ12815 778 aa13.29□□□□□ -0.28
UBR4-207ENST00000425413 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.29□□□□□ -0.28
UBR4-207ENST00000425413 SEPT12Q8IYM1 358 aa13.29□□□□□ -0.28
UBR4-207ENST00000425413 GJD4Q96KN9 370 aaPredicted RBP13.29□□□□□ -0.28
UBR4-207ENST00000425413 TRMT1Q9NXH9 659 aaKnown RBP13.29□□□□□ -0.28
UBR4-207ENST00000425413 ZNF174Q15697 407 aa13.29□□□□□ -0.28
UBR4-207ENST00000425413 SARM1Q6SZW1 724 aa13.29□□□□□ -0.28
UBR4-207ENST00000425413 TGFBRAP1Q8WUH2 860 aa13.29□□□□□ -0.28
UBR4-207ENST00000425413 ZNF592Q92610 1267 aa13.29□□□□□ -0.28
UBR4-207ENST00000425413 RPGRQ92834 1020 aaKnown RBP13.29□□□□□ -0.28
UBR4-207ENST00000425413 SERTAD1Q9UHV2 236 aa13.29□□□□□ -0.28
UBR4-207ENST00000425413 ADAMTS3O15072 1205 aa13.28□□□□□ -0.28
UBR4-207ENST00000425413 PRR29P0C7W0 189 aa13.28□□□□□ -0.28
UBR4-207ENST00000425413 KRBA2Q6ZNG9 492 aa13.28□□□□□ -0.28
UBR4-207ENST00000425413 TMC6Q7Z403 805 aa13.28□□□□□ -0.28
UBR4-207ENST00000425413 MAPKAPK5Q8IW41 473 aa13.28□□□□□ -0.28
UBR4-207ENST00000425413 SRBD1Q8N5C6 995 aaKnown RBP13.28□□□□□ -0.28
UBR4-207ENST00000425413 CTCFLQ8NI51 663 aaPredicted RBP13.28□□□□□ -0.28
UBR4-207ENST00000425413 MRFAP1L1Q96HT8 127 aa13.28□□□□□ -0.28
UBR4-207ENST00000425413 FOXP1Q9H334 677 aaPredicted RBP13.28□□□□□ -0.28
UBR4-207ENST00000425413 FBXO2Q9UK22 296 aaPredicted RBP13.28□□□□□ -0.28
UBR4-207ENST00000425413 RREB1Q92766 1687 aa13.28□□□□□ -0.28
UBR4-207ENST00000425413 COL5A3P25940 1745 aaPredicted RBP13.28□□□□□ -0.28
UBR4-207ENST00000425413 MYH2Q9UKX2 1941 aa13.28□□□□□ -0.28
UBR4-207ENST00000425413 USP27XA6NNY8 438 aa13.28□□□□□ -0.28
UBR4-207ENST00000425413 SEMA3EO15041 775 aa13.28□□□□□ -0.28
UBR4-207ENST00000425413 CASP1P29466 404 aa13.28□□□□□ -0.28
UBR4-207ENST00000425413 TFAP4Q01664 338 aa13.28□□□□□ -0.28
UBR4-207ENST00000425413 RILPL1Q5EBL4 403 aa13.28□□□□□ -0.28
UBR4-207ENST00000425413 LRRC8AQ8IWT6 810 aa13.28□□□□□ -0.28
UBR4-207ENST00000425413 RNF26Q9BY78 433 aaPredicted RBP13.28□□□□□ -0.28
UBR4-207ENST00000425413 CSRNP2Q9H175 543 aa13.28□□□□□ -0.28
UBR4-207ENST00000425413 AFF2P51816 1311 aa13.28□□□□□ -0.28
UBR4-207ENST00000425413 USP17L3A6NCW0 530 aa13.27□□□□□ -0.28
UBR4-207ENST00000425413 USP17L4A6NCW7 530 aa13.27□□□□□ -0.28
UBR4-207ENST00000425413 UFL1O94874 794 aa13.27□□□□□ -0.28
UBR4-207ENST00000425413 SKILP12757 684 aa13.27□□□□□ -0.28
UBR4-207ENST00000425413 FUT2Q10981 343 aa13.27□□□□□ -0.28
UBR4-207ENST00000425413 GRAPQ13588 217 aa13.27□□□□□ -0.28
UBR4-207ENST00000425413 TPD52L1Q16890 204 aaPredicted RBP13.27□□□□□ -0.28
UBR4-207ENST00000425413 PRR5LQ6MZQ0 368 aa13.27□□□□□ -0.28
UBR4-207ENST00000425413 USP17L1Q7RTZ2 530 aa13.27□□□□□ -0.28
UBR4-207ENST00000425413 GRAPLQ8TC17 118 aaPredicted RBP13.27□□□□□ -0.28
UBR4-207ENST00000425413 EPSTI1Q96J88 318 aa13.27□□□□□ -0.28
UBR4-207ENST00000425413 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.27□□□□□ -0.28
UBR4-207ENST00000425413 CACNA1SQ13698 1873 aa13.27□□□□□ -0.28
UBR4-207ENST00000425413 XBP1P17861 261 aa13.27□□□□□ -0.29
UBR4-207ENST00000425413 GPSM2P81274 684 aa13.27□□□□□ -0.29
UBR4-207ENST00000425413 RASGRP2Q7LDG7 609 aa13.27□□□□□ -0.29
UBR4-207ENST00000425413 MKNK2Q9HBH9 465 aa13.27□□□□□ -0.29
UBR4-207ENST00000425413 CHD4Q14839 1912 aa13.26□□□□□ -0.29
UBR4-207ENST00000425413 DYNC1I1O14576 645 aa13.26□□□□□ -0.29
UBR4-207ENST00000425413 KRT2P35908 639 aa13.26□□□□□ -0.29
UBR4-207ENST00000425413 AFMP43652 599 aa13.26□□□□□ -0.29
UBR4-207ENST00000425413 RBM6P78332 1123 aaKnown RBP13.26□□□□□ -0.29
UBR4-207ENST00000425413 PDE4BQ07343 736 aa13.26□□□□□ -0.29
UBR4-207ENST00000425413 NCAPHQ15003 741 aa13.26□□□□□ -0.29
UBR4-207ENST00000425413 STAMQ92783 540 aa13.26□□□□□ -0.29
UBR4-207ENST00000425413 GPKOWQ92917 476 aaPredicted RBP eCLIP13.26□□□□□ -0.298e-15■□□□□ 8.7
UBR4-207ENST00000425413 DHX58Q96C10 678 aa13.26□□□□□ -0.29
UBR4-207ENST00000425413 ATP8A2Q9NTI2 1148 aa13.26□□□□□ -0.29
UBR4-207ENST00000425413 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.26□□□□□ -0.29
UBR4-207ENST00000425413 TRIM75PA6NK02 468 aa13.26□□□□□ -0.29
UBR4-207ENST00000425413 PTPREP23469 700 aa13.26□□□□□ -0.29
UBR4-207ENST00000425413 GOLGA8FQ08AF8 430 aa13.26□□□□□ -0.29
UBR4-207ENST00000425413 GOLGA8DPQ0D2H9 430 aa13.26□□□□□ -0.29
UBR4-207ENST00000425413 TMTC3Q6ZXV5 915 aa13.26□□□□□ -0.29
UBR4-207ENST00000425413 TRMT44Q8IYL2 757 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms