RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 ZNF213O14771 459 aa9.58□□□□□ -0.88
MDC1-203ENST00000417033 HLA-DOAP06340 250 aa9.58□□□□□ -0.88
MDC1-203ENST00000417033 SHMT1P34896 483 aa9.58□□□□□ -0.88
MDC1-203ENST00000417033 TNNI2P48788 182 aa9.58□□□□□ -0.88
MDC1-203ENST00000417033 CDK8P49336 464 aa9.58□□□□□ -0.88
MDC1-203ENST00000417033 JAG1P78504 1218 aa9.58□□□□□ -0.88
MDC1-203ENST00000417033 TNFAIP1Q13829 316 aa9.58□□□□□ -0.88
MDC1-203ENST00000417033 PRKG1Q13976 671 aa9.58□□□□□ -0.88
MDC1-203ENST00000417033 IMMTQ16891 758 aaKnown RBP9.58□□□□□ -0.88
MDC1-203ENST00000417033 RRP12Q5JTH9 1297 aaKnown RBP9.58□□□□□ -0.88
MDC1-203ENST00000417033 C16orf86Q6ZW13 317 aa9.58□□□□□ -0.88
MDC1-203ENST00000417033 MOB2Q70IA6 237 aa9.58□□□□□ -0.88
MDC1-203ENST00000417033 ZC3H15Q8WU90 426 aaKnown RBP9.58□□□□□ -0.88
MDC1-203ENST00000417033 STAG1Q8WVM7 1258 aa9.58□□□□□ -0.88
MDC1-203ENST00000417033 TCEANC2Q96MN5 208 aa9.58□□□□□ -0.88
MDC1-203ENST00000417033 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.58□□□□□ -0.88
MDC1-203ENST00000417033 CTNNA3Q9UI47 895 aa9.58□□□□□ -0.88
MDC1-203ENST00000417033 ANAPC4Q9UJX5 808 aa9.58□□□□□ -0.88
MDC1-203ENST00000417033 B4E1Z4 1266 aa9.57□□□□□ -0.88
MDC1-203ENST00000417033 GDF11O95390 407 aa9.57□□□□□ -0.88
MDC1-203ENST00000417033 RASA1P20936 1047 aa9.57□□□□□ -0.88
MDC1-203ENST00000417033 RBM25P49756 843 aaKnown RBP9.57□□□□□ -0.88
MDC1-203ENST00000417033 ANTXR2P58335 489 aa9.57□□□□□ -0.88
MDC1-203ENST00000417033 FAM47AQ5JRC9 791 aa9.57□□□□□ -0.88
MDC1-203ENST00000417033 AKNAD1Q5T1N1 836 aa9.57□□□□□ -0.88
MDC1-203ENST00000417033 CYB5R4Q7L1T6 521 aa9.57□□□□□ -0.88
MDC1-203ENST00000417033 CHST3Q7LGC8 479 aa9.57□□□□□ -0.88
MDC1-203ENST00000417033 TTC6Q86TZ1 520 aa9.57□□□□□ -0.88
MDC1-203ENST00000417033 CCDC84Q86UT8 332 aaPredicted RBP9.57□□□□□ -0.88
MDC1-203ENST00000417033 CLEC10AQ8IUN9 316 aa9.57□□□□□ -0.88
MDC1-203ENST00000417033 JAKMIP1Q96N16 626 aaKnown RBP9.57□□□□□ -0.88
MDC1-203ENST00000417033 UPF3BQ9BZI7 483 aaKnown RBP9.57□□□□□ -0.88
MDC1-203ENST00000417033 DHX36Q9H2U1 1008 aaKnown RBP9.57□□□□□ -0.88
MDC1-203ENST00000417033 PI4KBQ9UBF8 816 aa9.57□□□□□ -0.88
MDC1-203ENST00000417033 SERPINB13Q9UIV8 391 aa9.57□□□□□ -0.88
MDC1-203ENST00000417033 EPB41L2O43491 1005 aaKnown RBP9.56□□□□□ -0.88
MDC1-203ENST00000417033 GABBR2O75899 941 aa9.56□□□□□ -0.88
MDC1-203ENST00000417033 FGRP09769 529 aa9.56□□□□□ -0.88
MDC1-203ENST00000417033 AKR1B1P15121 316 aa9.56□□□□□ -0.88
MDC1-203ENST00000417033 MCCP23508 829 aa9.56□□□□□ -0.88
MDC1-203ENST00000417033 CDC37L1Q7L3B6 337 aa9.56□□□□□ -0.88
MDC1-203ENST00000417033 METTL16Q86W50 562 aaKnown RBP9.56□□□□□ -0.88
MDC1-203ENST00000417033 MB21D2Q8IYB1 491 aaPredicted RBP9.56□□□□□ -0.88
MDC1-203ENST00000417033 CRACR2BQ8N4Y2 399 aaPredicted RBP9.56□□□□□ -0.88
MDC1-203ENST00000417033 LRRC2Q9BYS8 371 aa9.56□□□□□ -0.88
MDC1-203ENST00000417033 EHD4Q9H223 541 aa9.56□□□□□ -0.88
MDC1-203ENST00000417033 ZNF408Q9H9D4 720 aa9.56□□□□□ -0.88
MDC1-203ENST00000417033 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.56□□□□□ -0.88
MDC1-203ENST00000417033 GPHNQ9NQX3 736 aaPredicted RBP9.56□□□□□ -0.88
MDC1-203ENST00000417033 TOMM22Q9NS69 142 aa9.56□□□□□ -0.88
MDC1-203ENST00000417033 BMP2KQ9NSY1 1161 aaPredicted RBP9.56□□□□□ -0.88
MDC1-203ENST00000417033 PPP2R3BQ9Y5P8 575 aa9.56□□□□□ -0.88
MDC1-203ENST00000417033 TTLL13PA6NNM8 815 aa9.55□□□□□ -0.88
MDC1-203ENST00000417033 GTPBP6O43824 516 aaPredicted RBP9.55□□□□□ -0.88
MDC1-203ENST00000417033 ORC4O43929 436 aa9.55□□□□□ -0.88
MDC1-203ENST00000417033 NMT2O60551 498 aa9.55□□□□□ -0.88
MDC1-203ENST00000417033 KDM4AO75164 1064 aa9.55□□□□□ -0.88
MDC1-203ENST00000417033 ITGBL1O95965 494 aaPredicted RBP9.55□□□□□ -0.88
MDC1-203ENST00000417033 INPP5BP32019 993 aa9.55□□□□□ -0.88
MDC1-203ENST00000417033 TSGA10IPQ3SY00 556 aa9.55□□□□□ -0.88
MDC1-203ENST00000417033 RNF20Q5VTR2 975 aa9.55□□□□□ -0.88
MDC1-203ENST00000417033 MFSD6Q6ZSS7 791 aa9.55□□□□□ -0.88
MDC1-203ENST00000417033 AMOTL1Q8IY63 956 aa9.55□□□□□ -0.88
MDC1-203ENST00000417033 IL17RAQ96F46 866 aa9.55□□□□□ -0.88
MDC1-203ENST00000417033 ZKSCAN3Q9BRR0 538 aa9.55□□□□□ -0.88
MDC1-203ENST00000417033 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.55□□□□□ -0.88
MDC1-203ENST00000417033 UPF2Q9HAU5 1272 aaKnown RBP9.55□□□□□ -0.88
MDC1-203ENST00000417033 SENP2Q9HC62 589 aa9.55□□□□□ -0.88
MDC1-203ENST00000417033 PHF20L1A8MW92 1017 aa9.54□□□□□ -0.88
MDC1-203ENST00000417033 RANBP6O60518 1105 aaKnown RBP9.54□□□□□ -0.88
MDC1-203ENST00000417033 USP2O75604 605 aaPredicted RBP9.54□□□□□ -0.88
MDC1-203ENST00000417033 ZKSCAN1P17029 563 aaPredicted RBP9.54□□□□□ -0.88
MDC1-203ENST00000417033 CASTP20810 708 aaKnown RBP9.54□□□□□ -0.88
MDC1-203ENST00000417033 GUCY1A2P33402 732 aa9.54□□□□□ -0.88
MDC1-203ENST00000417033 MAP3K10Q02779 954 aa9.54□□□□□ -0.88
MDC1-203ENST00000417033 TATDN1Q6P1N9 297 aa9.54□□□□□ -0.88
MDC1-203ENST00000417033 FOXP4Q8IVH2 680 aaPredicted RBP9.54□□□□□ -0.88
MDC1-203ENST00000417033 SP7Q8TDD2 431 aaPredicted RBP9.54□□□□□ -0.88
MDC1-203ENST00000417033 NEK1Q96PY6 1258 aa9.54□□□□□ -0.88
MDC1-203ENST00000417033 TRIM34Q9BYJ4 488 aa9.54□□□□□ -0.88
MDC1-203ENST00000417033 TSHZ2Q9NRE2 1034 aa9.54□□□□□ -0.88
MDC1-203ENST00000417033 PAPPA2Q9BXP8 1791 aa9.54□□□□□ -0.88
MDC1-203ENST00000417033 OTOFQ9HC10 1997 aa9.54□□□□□ -0.88
MDC1-203ENST00000417033 PRC1O43663 620 aa9.53□□□□□ -0.88
MDC1-203ENST00000417033 TBC1D12O60347 775 aa9.53□□□□□ -0.88
MDC1-203ENST00000417033 CELF2O95319 508 aaKnown RBP9.53□□□□□ -0.88
MDC1-203ENST00000417033 CD2BP2O95400 341 aaKnown RBP9.53□□□□□ -0.88
MDC1-203ENST00000417033 GH2P01242 217 aa9.53□□□□□ -0.88
MDC1-203ENST00000417033 SLC3A2P08195 630 aaKnown RBP9.53□□□□□ -0.88
MDC1-203ENST00000417033 ANAPC15P60006 121 aa9.53□□□□□ -0.88
MDC1-203ENST00000417033 TFAP4Q01664 338 aa9.53□□□□□ -0.88
MDC1-203ENST00000417033 PDE4BQ07343 736 aa9.53□□□□□ -0.88
MDC1-203ENST00000417033 SEPT2Q15019 361 aa9.53□□□□□ -0.88
MDC1-203ENST00000417033 RALYLQ86SE5 291 aaKnown RBP9.53□□□□□ -0.88
MDC1-203ENST00000417033 EFCAB3Q8N7B9 438 aa9.53□□□□□ -0.88
MDC1-203ENST00000417033 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.53□□□□□ -0.88
MDC1-203ENST00000417033 NCOA7Q8NI08 942 aa9.53□□□□□ -0.88
MDC1-203ENST00000417033 ZKSCAN4Q969J2 545 aaPredicted RBP9.53□□□□□ -0.88
MDC1-203ENST00000417033 CLMNQ96JQ2 1002 aa9.53□□□□□ -0.88
MDC1-203ENST00000417033 WRNIP1Q96S55 665 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms