RNA–Protein interactions for RNA: ENST00000415191.6

C2CD3-205, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 2,587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-205ENST00000415191 COL4A1P02462 1669 aa22.28■■□□□ 1.16
C2CD3-205ENST00000415191 BAZ2AQ9UIF9 1905 aaKnown RBP22.28■■□□□ 1.16
C2CD3-205ENST00000415191 BCL9LQ86UU0 1499 aa22.28■■□□□ 1.16
C2CD3-205ENST00000415191 USP49Q70CQ1 688 aa22.28■■□□□ 1.16
C2CD3-205ENST00000415191 ZNF579Q8NAF0 562 aaKnown RBP22.28■■□□□ 1.16
C2CD3-205ENST00000415191 TMX1Q9H3N1 280 aa22.28■■□□□ 1.16
C2CD3-205ENST00000415191 CEP131Q9UPN4 1083 aa22.28■■□□□ 1.16
C2CD3-205ENST00000415191 AKAP17AQ02040 695 aaKnown RBP22.27■■□□□ 1.16
C2CD3-205ENST00000415191 FMR1Q06787 632 aaKnown RBP eCLIP22.27■■□□□ 1.16
C2CD3-205ENST00000415191 NT5DC1Q5TFE4 455 aa22.27■■□□□ 1.16
C2CD3-205ENST00000415191 ZNF397Q8NF99 534 aaPredicted RBP22.27■■□□□ 1.16
C2CD3-205ENST00000415191 CSRNP2Q9H175 543 aa22.27■■□□□ 1.16
C2CD3-205ENST00000415191 NFE2L3Q9Y4A8 694 aa22.27■■□□□ 1.16
C2CD3-205ENST00000415191 WTIPA6NIX2 430 aaPredicted RBP22.27■■□□□ 1.16
C2CD3-205ENST00000415191 CCP110O43303 1012 aa22.27■■□□□ 1.16
C2CD3-205ENST00000415191 KMT5BQ4FZB7 885 aa22.27■■□□□ 1.16
C2CD3-205ENST00000415191 CDC5LQ99459 802 aaKnown RBP22.27■■□□□ 1.16
C2CD3-205ENST00000415191 RNF26Q9BY78 433 aaPredicted RBP22.27■■□□□ 1.16
C2CD3-205ENST00000415191 VPS54Q9P1Q0 977 aa22.27■■□□□ 1.16
C2CD3-205ENST00000415191 FAM205CA6NFA0 338 aa22.26■■□□□ 1.15
C2CD3-205ENST00000415191 DDB1Q16531 1140 aa22.26■■□□□ 1.15
C2CD3-205ENST00000415191 TRMT44Q8IYL2 757 aaKnown RBP22.26■■□□□ 1.15
C2CD3-205ENST00000415191 MLKLQ8NB16 471 aa22.26■■□□□ 1.15
C2CD3-205ENST00000415191 SHISA4Q96DD7 197 aa22.26■■□□□ 1.15
C2CD3-205ENST00000415191 ANAPC4Q9UJX5 808 aa22.26■■□□□ 1.15
C2CD3-205ENST00000415191 ZNF804BA4D1E1 1349 aa22.26■■□□□ 1.15
C2CD3-205ENST00000415191 LAMB2P55268 1798 aa22.26■■□□□ 1.15
C2CD3-205ENST00000415191 hCG_1642624A0A1W2PR95 340 aa22.26■■□□□ 1.15
C2CD3-205ENST00000415191 SARSP49591 514 aaKnown RBP22.26■■□□□ 1.15
C2CD3-205ENST00000415191 ENAHQ8N8S7 591 aaPredicted RBP22.26■■□□□ 1.15
C2CD3-205ENST00000415191 GNL3LQ9NVN8 582 aaKnown RBP22.26■■□□□ 1.15
C2CD3-205ENST00000415191 PRDM4Q9UKN5 801 aa22.26■■□□□ 1.15
C2CD3-205ENST00000415191 COL16A1Q07092 1604 aaPredicted RBP22.25■■□□□ 1.15
C2CD3-205ENST00000415191 CYP2D7A0A087X1C5 515 aa22.25■■□□□ 1.15
C2CD3-205ENST00000415191 NPHP1O15259 732 aa22.25■■□□□ 1.15
C2CD3-205ENST00000415191 ACTN4O43707 911 aaKnown RBP22.25■■□□□ 1.15
C2CD3-205ENST00000415191 TUBB4AP04350 444 aa22.25■■□□□ 1.15
C2CD3-205ENST00000415191 CDK11BP21127 795 aaKnown RBP22.25■■□□□ 1.15
C2CD3-205ENST00000415191 ETF1P62495 437 aaKnown RBP22.25■■□□□ 1.15
C2CD3-205ENST00000415191 DMTNQ08495 405 aa22.25■■□□□ 1.15
C2CD3-205ENST00000415191 MORC3Q14149 939 aa22.25■■□□□ 1.15
C2CD3-205ENST00000415191 PKNOX2Q96KN3 472 aa22.25■■□□□ 1.15
C2CD3-205ENST00000415191 DACH1Q9UI36 760 aa22.25■■□□□ 1.15
C2CD3-205ENST00000415191 DDX41Q9UJV9 622 aaKnown RBP22.25■■□□□ 1.15
C2CD3-205ENST00000415191 TAF1P21675 1872 aa22.25■■□□□ 1.15
C2CD3-205ENST00000415191 ZSCAN10Q96SZ4 725 aaPredicted RBP22.25■■□□□ 1.15
C2CD3-205ENST00000415191 RIOK1Q9BRS2 568 aaKnown RBP22.25■■□□□ 1.15
C2CD3-205ENST00000415191 DNAI1Q9UI46 699 aa22.25■■□□□ 1.15
C2CD3-205ENST00000415191 CICQ96RK0 1608 aaPredicted RBP22.25■■□□□ 1.15
C2CD3-205ENST00000415191 COL1A1P02452 1464 aaPredicted RBP22.24■■□□□ 1.15
C2CD3-205ENST00000415191 XBP1P17861 261 aa22.24■■□□□ 1.15
C2CD3-205ENST00000415191 DYNLL1P63167 89 aaKnown RBP22.24■■□□□ 1.15
C2CD3-205ENST00000415191 PPP2R5BQ15173 497 aa22.24■■□□□ 1.15
C2CD3-205ENST00000415191 FBXO38Q6PIJ6 1188 aa22.24■■□□□ 1.15
C2CD3-205ENST00000415191 TRIM75PA6NK02 468 aa22.24■■□□□ 1.15
C2CD3-205ENST00000415191 PRDM1O75626 825 aa22.24■■□□□ 1.15
C2CD3-205ENST00000415191 ZNF18P17022 549 aa22.24■■□□□ 1.15
C2CD3-205ENST00000415191 PKN1Q16512 942 aa22.24■■□□□ 1.15
C2CD3-205ENST00000415191 CCDC93Q567U6 631 aa22.24■■□□□ 1.15
C2CD3-205ENST00000415191 ANKRD18AQ8IVF6 992 aa22.24■■□□□ 1.15
C2CD3-205ENST00000415191 LRRN4CLQ8ND94 238 aa22.24■■□□□ 1.15
C2CD3-205ENST00000415191 ENOX1Q8TC92 643 aaKnown RBP22.24■■□□□ 1.15
C2CD3-205ENST00000415191 BAZ2BQ9UIF8 2168 aaKnown RBP22.23■■□□□ 1.15
C2CD3-205ENST00000415191 IFIT1BQ5T764 474 aaKnown RBP22.23■■□□□ 1.15
C2CD3-205ENST00000415191 KANK3Q6NY19 840 aa22.23■■□□□ 1.15
C2CD3-205ENST00000415191 CACNA1SQ13698 1873 aa22.23■■□□□ 1.15
C2CD3-205ENST00000415191 C3orf67Q6ZVT6 689 aa22.23■■□□□ 1.15
C2CD3-205ENST00000415191 CATIPQ7Z7H3 387 aa22.23■■□□□ 1.15
C2CD3-205ENST00000415191 TRIML1Q8N9V2 468 aa22.23■■□□□ 1.15
C2CD3-205ENST00000415191 DHX58Q96C10 678 aa22.23■■□□□ 1.15
C2CD3-205ENST00000415191 PLEKHA8P1O95397 391 aa22.22■■□□□ 1.15
C2CD3-205ENST00000415191 KRT2P35908 639 aa22.22■■□□□ 1.15
C2CD3-205ENST00000415191 EARS2Q5JPH6 523 aaKnown RBP22.22■■□□□ 1.15
C2CD3-205ENST00000415191 TMEM139Q8IV31 216 aa22.22■■□□□ 1.15
C2CD3-205ENST00000415191 V9GY48 417 aaPredicted RBP22.22■■□□□ 1.15
C2CD3-205ENST00000415191 FUT2Q10981 343 aa22.22■■□□□ 1.15
C2CD3-205ENST00000415191 ERFEQ4G0M1 354 aa22.22■■□□□ 1.15
C2CD3-205ENST00000415191 TRIM65Q6PJ69 517 aa22.22■■□□□ 1.15
C2CD3-205ENST00000415191 REXO1L1PQ8IX06 675 aa22.22■■□□□ 1.15
C2CD3-205ENST00000415191 MED15Q96RN5 788 aa22.22■■□□□ 1.15
C2CD3-205ENST00000415191 NOL10Q9BSC4 688 aaKnown RBP22.22■■□□□ 1.15
C2CD3-205ENST00000415191 PHF20Q9BVI0 1012 aa22.22■■□□□ 1.15
C2CD3-205ENST00000415191 CDCA7Q9BWT1 371 aaPredicted RBP22.22■■□□□ 1.15
C2CD3-205ENST00000415191 ZNF652Q9Y2D9 606 aa22.22■■□□□ 1.15
C2CD3-205ENST00000415191 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.22■■□□□ 1.15
C2CD3-205ENST00000415191 PHLPP2Q6ZVD8 1323 aa22.21■■□□□ 1.15
C2CD3-205ENST00000415191 TBX2Q13207 712 aaPredicted RBP22.21■■□□□ 1.15
C2CD3-205ENST00000415191 ERCC6LQ2NKX8 1250 aa22.21■■□□□ 1.15
C2CD3-205ENST00000415191 MARCH10Q8NA82 808 aaPredicted RBP22.21■■□□□ 1.15
C2CD3-205ENST00000415191 EPSTI1Q96J88 318 aa22.21■■□□□ 1.15
C2CD3-205ENST00000415191 SAMSN1Q9NSI8 373 aaKnown RBP22.21■■□□□ 1.15
C2CD3-205ENST00000415191 DUOX1Q9NRD9 1551 aa22.21■■□□□ 1.15
C2CD3-205ENST00000415191 ARHGAP6O43182 974 aa22.21■■□□□ 1.15
C2CD3-205ENST00000415191 UBE4AQ14139 1066 aa22.21■■□□□ 1.15
C2CD3-205ENST00000415191 CAVIN4Q5BKX8 364 aa22.21■■□□□ 1.15
C2CD3-205ENST00000415191 UTP14CQ5TAP6 766 aaKnown RBP22.21■■□□□ 1.15
C2CD3-205ENST00000415191 NUTM2AQ8IVF1 878 aaPredicted RBP22.21■■□□□ 1.15
C2CD3-205ENST00000415191 AATFQ9NY61 560 aaKnown RBP eCLIP22.21■■□□□ 1.15
C2CD3-205ENST00000415191 RREB1Q92766 1687 aa22.21■■□□□ 1.15
C2CD3-205ENST00000415191 A0A087X0B3 334 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms