RNA–Protein interactions for RNA: ENST00000397381.4

UCA1-201, Transcript of urothelial cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene UCA1, Length 2,299 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-201ENST00000397381 FAN1Q9Y2M0 1017 aa10.59□□□□□ -0.71
UCA1-201ENST00000397381 SRPRBQ9Y5M8 271 aaKnown RBP10.59□□□□□ -0.71
UCA1-201ENST00000397381 MST1RQ04912 1400 aa10.59□□□□□ -0.71
UCA1-201ENST00000397381 FER1L4A9Z1Z3 1794 aa10.59□□□□□ -0.71
UCA1-201ENST00000397381 IFNAR1P17181 557 aa10.59□□□□□ -0.71
UCA1-201ENST00000397381 ADD2P35612 726 aa10.59□□□□□ -0.71
UCA1-201ENST00000397381 MAGEA9P43362 315 aa10.59□□□□□ -0.71
UCA1-201ENST00000397381 NOP2P46087 812 aaKnown RBP10.59□□□□□ -0.71
UCA1-201ENST00000397381 TOB1P50616 345 aaPredicted RBP10.59□□□□□ -0.71
UCA1-201ENST00000397381 ZNF827Q17R98 1081 aa10.59□□□□□ -0.71
UCA1-201ENST00000397381 CDKAL1Q5VV42 579 aa10.59□□□□□ -0.71
UCA1-201ENST00000397381 WDR93Q6P2C0 686 aa10.59□□□□□ -0.71
UCA1-201ENST00000397381 SLC26A6Q9BXS9 759 aa10.59□□□□□ -0.71
UCA1-201ENST00000397381 VIPAS39Q9H9C1 493 aa10.59□□□□□ -0.71
UCA1-201ENST00000397381 LY9Q9HBG7 655 aa10.59□□□□□ -0.71
UCA1-201ENST00000397381 FAM217BQ9NTX9 383 aaPredicted RBP10.59□□□□□ -0.71
UCA1-201ENST00000397381 NLRP2Q9NX02 1062 aa10.59□□□□□ -0.71
UCA1-201ENST00000397381 NBPF26B4DH59 902 aa10.58□□□□□ -0.72
UCA1-201ENST00000397381 TEX33O43247 280 aa10.58□□□□□ -0.72
UCA1-201ENST00000397381 MCM3P25205 808 aa10.58□□□□□ -0.72
UCA1-201ENST00000397381 CABP4P57796 275 aa10.58□□□□□ -0.72
UCA1-201ENST00000397381 SCARF1Q14162 830 aa10.58□□□□□ -0.72
UCA1-201ENST00000397381 TTF1Q15361 905 aaPredicted RBP10.58□□□□□ -0.72
UCA1-201ENST00000397381 ALX1Q15699 326 aa10.58□□□□□ -0.72
UCA1-201ENST00000397381 TMEM67Q5HYA8 995 aa10.58□□□□□ -0.72
UCA1-201ENST00000397381 SPECC1Q5M775 1068 aa10.58□□□□□ -0.72
UCA1-201ENST00000397381 NBPF14Q5TI25 921 aa10.58□□□□□ -0.72
UCA1-201ENST00000397381 NBPF10Q6P3W6 841 aaKnown RBP10.58□□□□□ -0.72
UCA1-201ENST00000397381 DIS3L2Q8IYB7 885 aaKnown RBP10.58□□□□□ -0.72
UCA1-201ENST00000397381 SLC35F6Q8N357 371 aa10.58□□□□□ -0.72
UCA1-201ENST00000397381 NBPF15Q8N660 670 aa10.58□□□□□ -0.72
UCA1-201ENST00000397381 CTCFLQ8NI51 663 aaPredicted RBP10.58□□□□□ -0.72
UCA1-201ENST00000397381 SYNRGQ9UMZ2 1314 aa10.58□□□□□ -0.72
UCA1-201ENST00000397381 MEGF6O75095 1541 aa10.58□□□□□ -0.72
UCA1-201ENST00000397381 PKD1L3Q7Z443 1732 aa10.58□□□□□ -0.72
UCA1-201ENST00000397381 LRP6O75581 1613 aa10.58□□□□□ -0.72
UCA1-201ENST00000397381 RXRAP19793 462 aa10.58□□□□□ -0.72
UCA1-201ENST00000397381 VSNL1P62760 191 aa10.58□□□□□ -0.72
UCA1-201ENST00000397381 CUL4BQ13620 913 aa10.58□□□□□ -0.72
UCA1-201ENST00000397381 HSP90AB3PQ58FF7 597 aa10.58□□□□□ -0.72
UCA1-201ENST00000397381 LMOD2Q6P5Q4 547 aa10.58□□□□□ -0.72
UCA1-201ENST00000397381 TRIM22Q8IYM9 498 aa10.58□□□□□ -0.72
UCA1-201ENST00000397381 ZNF512BQ96KM6 892 aaPredicted RBP10.58□□□□□ -0.72
UCA1-201ENST00000397381 MYO5AQ9Y4I1 1855 aaKnown RBP10.57□□□□□ -0.72
UCA1-201ENST00000397381 BTBD18B2RXH4 712 aa10.57□□□□□ -0.72
UCA1-201ENST00000397381 B4E1Z4 1266 aa10.57□□□□□ -0.72
UCA1-201ENST00000397381 RHOXF2BP0C7M4 288 aa10.57□□□□□ -0.72
UCA1-201ENST00000397381 AARSP49588 968 aaKnown RBP eCLIP10.57□□□□□ -0.72
UCA1-201ENST00000397381 TRIM14Q14142 442 aa10.57□□□□□ -0.72
UCA1-201ENST00000397381 UBE3CQ15386 1083 aa10.57□□□□□ -0.72
UCA1-201ENST00000397381 TTLL7Q6ZT98 887 aa10.57□□□□□ -0.72
UCA1-201ENST00000397381 CCDC102AQ96A19 550 aa10.57□□□□□ -0.72
UCA1-201ENST00000397381 RHOXF2Q9BQY4 288 aa10.57□□□□□ -0.72
UCA1-201ENST00000397381 SLC12A7Q9Y666 1083 aa10.57□□□□□ -0.72
UCA1-201ENST00000397381 N4BP1O75113 896 aaKnown RBP10.56□□□□□ -0.72
UCA1-201ENST00000397381 CASP14P31944 242 aa10.56□□□□□ -0.72
UCA1-201ENST00000397381 GRIN1Q05586 938 aa10.56□□□□□ -0.72
UCA1-201ENST00000397381 MAP9Q49MG5 647 aa10.56□□□□□ -0.72
UCA1-201ENST00000397381 CYP26C1Q6V0L0 522 aa10.56□□□□□ -0.72
UCA1-201ENST00000397381 GRAMD1CQ8IYS0 662 aa10.56□□□□□ -0.72
UCA1-201ENST00000397381 CPLX3Q8WVH0 158 aa10.56□□□□□ -0.72
UCA1-201ENST00000397381 GSDMAQ96QA5 445 aa10.56□□□□□ -0.72
UCA1-201ENST00000397381 SENP2Q9HC62 589 aa10.56□□□□□ -0.72
UCA1-201ENST00000397381 AATFQ9NY61 560 aaKnown RBP eCLIP10.56□□□□□ -0.72
UCA1-201ENST00000397381 MYO6Q9UM54 1294 aa10.56□□□□□ -0.72
UCA1-201ENST00000397381 AKAP11Q9UKA4 1901 aa10.56□□□□□ -0.72
UCA1-201ENST00000397381 GYPCP04921 128 aa10.56□□□□□ -0.72
UCA1-201ENST00000397381 APPP05067 770 aa10.56□□□□□ -0.72
UCA1-201ENST00000397381 TTC31Q49AM3 519 aaPredicted RBP10.56□□□□□ -0.72
UCA1-201ENST00000397381 SH3RF1Q7Z6J0 888 aa10.56□□□□□ -0.72
UCA1-201ENST00000397381 CCDC148Q8NFR7 591 aa10.56□□□□□ -0.72
UCA1-201ENST00000397381 PPM1EQ8WY54 764 aa10.56□□□□□ -0.72
UCA1-201ENST00000397381 CNNM2Q9H8M5 875 aa10.56□□□□□ -0.72
UCA1-201ENST00000397381 DENND2AQ9ULE3 1009 aa10.56□□□□□ -0.72
UCA1-201ENST00000397381 IFIT3O14879 490 aaKnown RBP10.55□□□□□ -0.72
UCA1-201ENST00000397381 CYP27B1O15528 508 aa10.55□□□□□ -0.72
UCA1-201ENST00000397381 DEXIO95424 95 aa10.55□□□□□ -0.72
UCA1-201ENST00000397381 ARHGAP25P42331 645 aa10.55□□□□□ -0.72
UCA1-201ENST00000397381 CORO7P57737 925 aa10.55□□□□□ -0.72
UCA1-201ENST00000397381 AMPD2Q01433 879 aa10.55□□□□□ -0.72
UCA1-201ENST00000397381 SPAG1Q07617 926 aa10.55□□□□□ -0.72
UCA1-201ENST00000397381 TAF7LQ5H9L4 462 aa10.55□□□□□ -0.72
UCA1-201ENST00000397381 LRRC31Q6UY01 552 aa10.55□□□□□ -0.72
UCA1-201ENST00000397381 CSRNP2Q9H175 543 aa10.55□□□□□ -0.72
UCA1-201ENST00000397381 STRN4Q9NRL3 753 aa10.55□□□□□ -0.72
UCA1-201ENST00000397381 LIMA1Q9UHB6 759 aaKnown RBP10.55□□□□□ -0.72
UCA1-201ENST00000397381 PCDHB6Q9Y5E3 794 aa10.55□□□□□ -0.72
UCA1-201ENST00000397381 TIAM2Q8IVF5 1701 aa10.55□□□□□ -0.72
UCA1-201ENST00000397381 CHD4Q14839 1912 aa10.55□□□□□ -0.72
UCA1-201ENST00000397381 A0A0U1RQJ8 604 aa10.55□□□□□ -0.72
UCA1-201ENST00000397381 CCDC196A0A1B0GTZ2 297 aa10.55□□□□□ -0.72
UCA1-201ENST00000397381 EIF3CLB5ME19 914 aaKnown RBP10.55□□□□□ -0.72
UCA1-201ENST00000397381 PPFIA4O75335 1185 aa10.55□□□□□ -0.72
UCA1-201ENST00000397381 BMP15O95972 392 aa10.55□□□□□ -0.72
UCA1-201ENST00000397381 FXR1P51114 621 aaKnown RBP eCLIP10.55□□□□□ -0.72
UCA1-201ENST00000397381 RCAN1P53805 252 aa10.55□□□□□ -0.72
UCA1-201ENST00000397381 ICE2Q659A1 982 aa10.55□□□□□ -0.72
UCA1-201ENST00000397381 KRT28Q7Z3Y7 464 aa10.55□□□□□ -0.72
UCA1-201ENST00000397381 ACRBPQ8NEB7 543 aa10.55□□□□□ -0.72
UCA1-201ENST00000397381 NKX2-3Q8TAU0 364 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms