RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 TOM1O60784 492 aa11.97□□□□□ -0.49
CALD1-203ENST00000393118 NAP1L1P55209 391 aaKnown RBP11.97□□□□□ -0.49
CALD1-203ENST00000393118 KARSQ15046 597 aaKnown RBP11.97□□□□□ -0.49
CALD1-203ENST00000393118 IL17RAQ96F46 866 aa11.97□□□□□ -0.49
CALD1-203ENST00000393118 ZSCAN10Q96SZ4 725 aaPredicted RBP11.97□□□□□ -0.49
CALD1-203ENST00000393118 ZNF287Q9HBT7 754 aa11.97□□□□□ -0.49
CALD1-203ENST00000393118 H0YHG0 523 aa11.97□□□□□ -0.49
CALD1-203ENST00000393118 LDHCP07864 332 aa11.97□□□□□ -0.49
CALD1-203ENST00000393118 CALM1P0DP23 149 aa11.97□□□□□ -0.49
CALD1-203ENST00000393118 CALM2P0DP24 149 aa11.97□□□□□ -0.49
CALD1-203ENST00000393118 CALM3P0DP25 149 aa11.97□□□□□ -0.49
CALD1-203ENST00000393118 KRBA2Q6ZNG9 492 aa11.97□□□□□ -0.49
CALD1-203ENST00000393118 FUCA2Q9BTY2 467 aa11.97□□□□□ -0.49
CALD1-203ENST00000393118 STAT6P42226 847 aa11.96□□□□□ -0.49
CALD1-203ENST00000393118 LONRF3Q496Y0 759 aa11.96□□□□□ -0.49
CALD1-203ENST00000393118 PLA2G12BQ9BX93 195 aa11.96□□□□□ -0.49
CALD1-203ENST00000393118 GSG1L2A8MUP6 293 aa11.96□□□□□ -0.49
CALD1-203ENST00000393118 CASQ1P31415 396 aa11.96□□□□□ -0.49
CALD1-203ENST00000393118 CCT6AP40227 531 aaKnown RBP11.96□□□□□ -0.49
CALD1-203ENST00000393118 TFAP4Q01664 338 aa11.96□□□□□ -0.49
CALD1-203ENST00000393118 ANKRD2Q9GZV1 360 aa11.96□□□□□ -0.49
CALD1-203ENST00000393118 LY9Q9HBG7 655 aa11.96□□□□□ -0.49
CALD1-203ENST00000393118 COBLO75128 1261 aa11.96□□□□□ -0.5
CALD1-203ENST00000393118 GUCY1A2P33402 732 aa11.96□□□□□ -0.5
CALD1-203ENST00000393118 TTC38Q5R3I4 469 aa11.96□□□□□ -0.5
CALD1-203ENST00000393118 BLZF1Q9H2G9 400 aa11.96□□□□□ -0.5
CALD1-203ENST00000393118 PCDHB6Q9Y5E3 794 aa11.96□□□□□ -0.5
CALD1-203ENST00000393118 UBN2Q6ZU65 1347 aa11.96□□□□□ -0.5
CALD1-203ENST00000393118 RGPD1P0DJD0 1748 aa11.95□□□□□ -0.5
CALD1-203ENST00000393118 RIMBP2O15034 1052 aa11.95□□□□□ -0.5
CALD1-203ENST00000393118 CLSTN1O94985 981 aa11.95□□□□□ -0.5
CALD1-203ENST00000393118 IFNAR1P17181 557 aa11.95□□□□□ -0.5
CALD1-203ENST00000393118 KIF4BQ2VIQ3 1234 aa11.95□□□□□ -0.5
CALD1-203ENST00000393118 MAPKAPK5Q8IW41 473 aa11.95□□□□□ -0.5
CALD1-203ENST00000393118 NEK11Q8NG66 645 aa11.95□□□□□ -0.5
CALD1-203ENST00000393118 TANGO6Q9C0B7 1094 aa11.95□□□□□ -0.5
CALD1-203ENST00000393118 HPS5Q9UPZ3 1129 aa11.95□□□□□ -0.5
CALD1-203ENST00000393118 CACNA1FO60840 1977 aa11.95□□□□□ -0.5
CALD1-203ENST00000393118 WDHD1O75717 1129 aaPredicted RBP11.95□□□□□ -0.5
CALD1-203ENST00000393118 SLU7O95391 586 aaKnown RBP11.95□□□□□ -0.5
CALD1-203ENST00000393118 FMNL1O95466 1100 aaPredicted RBP11.95□□□□□ -0.5
CALD1-203ENST00000393118 LIFRP42702 1097 aa11.95□□□□□ -0.5
CALD1-203ENST00000393118 RBM6P78332 1123 aaKnown RBP11.95□□□□□ -0.5
CALD1-203ENST00000393118 CCDC12Q8WUD4 166 aaPredicted RBP11.95□□□□□ -0.5
CALD1-203ENST00000393118 LZTFL1Q9NQ48 299 aa11.95□□□□□ -0.5
CALD1-203ENST00000393118 FAM208AQ9UK61 1670 aaKnown RBP11.95□□□□□ -0.5
CALD1-203ENST00000393118 XRN1Q8IZH2 1706 aaKnown RBP11.95□□□□□ -0.5
CALD1-203ENST00000393118 IDEP14735 1019 aa11.95□□□□□ -0.5
CALD1-203ENST00000393118 NAPAP54920 295 aa11.95□□□□□ -0.5
CALD1-203ENST00000393118 ELF2Q15723 593 aa11.95□□□□□ -0.5
CALD1-203ENST00000393118 CCDC96Q2M329 555 aa11.95□□□□□ -0.5
CALD1-203ENST00000393118 CNBD1Q8NA66 436 aa11.95□□□□□ -0.5
CALD1-203ENST00000393118 TGFBRAP1Q8WUH2 860 aa11.95□□□□□ -0.5
CALD1-203ENST00000393118 CELF1Q92879 486 aaKnown RBP11.95□□□□□ -0.5
CALD1-203ENST00000393118 TCP11L1Q9NUJ3 509 aa11.95□□□□□ -0.5
CALD1-203ENST00000393118 RBM28Q9NW13 759 aaKnown RBP11.95□□□□□ -0.5
CALD1-203ENST00000393118 TCHHQ07283 1943 aa11.95□□□□□ -0.5
CALD1-203ENST00000393118 BMP15O95972 392 aa11.94□□□□□ -0.5
CALD1-203ENST00000393118 ADKP55263 362 aaKnown RBP11.94□□□□□ -0.5
CALD1-203ENST00000393118 TRAPPC3LQ5T215 181 aa11.94□□□□□ -0.5
CALD1-203ENST00000393118 MMP1P03956 469 aa11.94□□□□□ -0.5
CALD1-203ENST00000393118 KRT18P05783 430 aaKnown RBP11.94□□□□□ -0.5
CALD1-203ENST00000393118 EIF6P56537 245 aaKnown RBP11.94□□□□□ -0.5
CALD1-203ENST00000393118 UBE4AQ14139 1066 aa11.94□□□□□ -0.5
CALD1-203ENST00000393118 IQUBQ8NA54 791 aa11.94□□□□□ -0.5
CALD1-203ENST00000393118 ZNHIT6Q9NWK9 470 aaKnown RBP11.94□□□□□ -0.5
CALD1-203ENST00000393118 NALCNQ8IZF0 1738 aa11.94□□□□□ -0.5
CALD1-203ENST00000393118 UFL1O94874 794 aa11.94□□□□□ -0.5
CALD1-203ENST00000393118 PLA2G4DQ86XP0 818 aa11.94□□□□□ -0.5
CALD1-203ENST00000393118 ZNF710Q8N1W2 664 aa11.94□□□□□ -0.5
CALD1-203ENST00000393118 CRACR2BQ8N4Y2 399 aaPredicted RBP11.94□□□□□ -0.5
CALD1-203ENST00000393118 CAGE1Q8TC20 777 aa11.94□□□□□ -0.5
CALD1-203ENST00000393118 GPKOWQ92917 476 aaPredicted RBP eCLIP11.94□□□□□ -0.5
CALD1-203ENST00000393118 SECISBP2LQ93073 1101 aaKnown RBP11.94□□□□□ -0.5
CALD1-203ENST00000393118 BAG1Q99933 345 aaPredicted RBP11.94□□□□□ -0.5
CALD1-203ENST00000393118 CSRNP2Q9H175 543 aa11.94□□□□□ -0.5
CALD1-203ENST00000393118 EPB41L4AQ9HCS5 686 aaPredicted RBP11.94□□□□□ -0.5
CALD1-203ENST00000393118 NAA30Q147X3 362 aaPredicted RBP11.94□□□□□ -0.5
CALD1-203ENST00000393118 CCDC178Q5BJE1 867 aa11.94□□□□□ -0.5
CALD1-203ENST00000393118 ZNF804AQ7Z570 1209 aa11.94□□□□□ -0.5
CALD1-203ENST00000393118 TXLNBQ8N3L3 684 aa11.94□□□□□ -0.5
CALD1-203ENST00000393118 OXER1Q8TDS5 423 aa11.94□□□□□ -0.5
CALD1-203ENST00000393118 TRIM47Q96LD4 638 aa11.94□□□□□ -0.5
CALD1-203ENST00000393118 KIF5CO60282 957 aa11.93□□□□□ -0.5
CALD1-203ENST00000393118 PPP6R2O75170 966 aa11.93□□□□□ -0.5
CALD1-203ENST00000393118 PLEKHA8P1O95397 391 aa11.93□□□□□ -0.5
CALD1-203ENST00000393118 ARID4AP29374 1257 aaPredicted RBP11.93□□□□□ -0.5
CALD1-203ENST00000393118 IQCB1Q15051 598 aa11.93□□□□□ -0.5
CALD1-203ENST00000393118 ZNF34Q8IZ26 560 aa11.93□□□□□ -0.5
CALD1-203ENST00000393118 KLHL34Q8N239 644 aa11.93□□□□□ -0.5
CALD1-203ENST00000393118 VPS16Q9H269 839 aa11.93□□□□□ -0.5
CALD1-203ENST00000393118 PRDX5P30044 214 aa11.93□□□□□ -0.5
CALD1-203ENST00000393118 CDC25AP30304 524 aa11.93□□□□□ -0.5
CALD1-203ENST00000393118 SMYD4Q8IYR2 804 aaPredicted RBP11.93□□□□□ -0.5
CALD1-203ENST00000393118 GPR101Q96P66 508 aaPredicted RBP11.93□□□□□ -0.5
CALD1-203ENST00000393118 ZNF215Q9UL58 517 aaPredicted RBP11.93□□□□□ -0.5
CALD1-203ENST00000393118 CTNND2Q9UQB3 1225 aa11.93□□□□□ -0.5
CALD1-203ENST00000393118 FOXN1O15353 648 aa11.93□□□□□ -0.5
CALD1-203ENST00000393118 NMT2O60551 498 aa11.93□□□□□ -0.5
CALD1-203ENST00000393118 GOLGA8HP0CJ92 632 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms