RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 NOSTRINQ8IVI9 506 aa13.31□□□□□ -0.28
DDR1-227ENST00000376570 CTNND2Q9UQB3 1225 aa13.31□□□□□ -0.28
DDR1-227ENST00000376570 KRT2P35908 639 aa13.31□□□□□ -0.28
DDR1-227ENST00000376570 SLC16A2P36021 539 aa13.31□□□□□ -0.28
DDR1-227ENST00000376570 USP17L2Q6R6M4 530 aa13.31□□□□□ -0.28
DDR1-227ENST00000376570 DYMQ7RTS9 669 aa13.31□□□□□ -0.28
DDR1-227ENST00000376570 KCNF1Q9H3M0 494 aa13.31□□□□□ -0.28
DDR1-227ENST00000376570 BIN2Q9UBW5 565 aaPredicted RBP13.31□□□□□ -0.28
DDR1-227ENST00000376570 FILIP1LQ4L180 1135 aa13.3□□□□□ -0.28
DDR1-227ENST00000376570 LRP10Q7Z4F1 713 aa13.3□□□□□ -0.28
DDR1-227ENST00000376570 TMEM87BQ96K49 555 aa13.3□□□□□ -0.28
DDR1-227ENST00000376570 ZC3H12CQ9C0D7 883 aaKnown RBP13.3□□□□□ -0.28
DDR1-227ENST00000376570 PUF60Q9UHX1 559 aaKnown RBP13.3□□□□□ -0.28
DDR1-227ENST00000376570 RCOR1Q9UKL0 485 aa13.3□□□□□ -0.28
DDR1-227ENST00000376570 USP42Q9H9J4 1324 aaKnown RBP13.3□□□□□ -0.28
DDR1-227ENST00000376570 PP2D1A8MPX8 630 aa13.3□□□□□ -0.28
DDR1-227ENST00000376570 PRR29P0C7W0 189 aa13.3□□□□□ -0.28
DDR1-227ENST00000376570 STAT6P42226 847 aa13.3□□□□□ -0.28
DDR1-227ENST00000376570 TXKP42681 527 aa13.3□□□□□ -0.28
DDR1-227ENST00000376570 UBE3CQ15386 1083 aa13.3□□□□□ -0.28
DDR1-227ENST00000376570 CLEC17AQ6ZS10 378 aa13.3□□□□□ -0.28
DDR1-227ENST00000376570 ARHGEF1Q92888 912 aaKnown RBP13.3□□□□□ -0.28
DDR1-227ENST00000376570 PDLIM2Q96JY6 352 aa13.3□□□□□ -0.28
DDR1-227ENST00000376570 DBNDD1Q9H9R9 158 aa13.3□□□□□ -0.28
DDR1-227ENST00000376570 TCHHQ07283 1943 aa13.3□□□□□ -0.28
DDR1-227ENST00000376570 UTYO14607 1347 aa13.3□□□□□ -0.28
DDR1-227ENST00000376570 ZMYM6O95789 1325 aa13.3□□□□□ -0.28
DDR1-227ENST00000376570 MATR3P43243 847 aaKnown RBP eCLIP13.3□□□□□ -0.28
DDR1-227ENST00000376570 BRAPQ7Z569 592 aa13.3□□□□□ -0.28
DDR1-227ENST00000376570 KIF18AQ8NI77 898 aa13.3□□□□□ -0.28
DDR1-227ENST00000376570 ZSCAN10Q96SZ4 725 aaPredicted RBP13.3□□□□□ -0.28
DDR1-227ENST00000376570 TAB2Q9NYJ8 693 aa13.3□□□□□ -0.28
DDR1-227ENST00000376570 C3P01024 1663 aa13.3□□□□□ -0.28
DDR1-227ENST00000376570 ARHGAP23Q9P227 1491 aa13.29□□□□□ -0.28
DDR1-227ENST00000376570 CPDO75976 1380 aa13.29□□□□□ -0.28
DDR1-227ENST00000376570 BAG3O95817 575 aa13.29□□□□□ -0.28
DDR1-227ENST00000376570 PSMB7Q99436 277 aa13.29□□□□□ -0.28
DDR1-227ENST00000376570 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.29□□□□□ -0.28
DDR1-227ENST00000376570 SAMSN1Q9NSI8 373 aaKnown RBP13.29□□□□□ -0.28
DDR1-227ENST00000376570 BMP2KQ9NSY1 1161 aaPredicted RBP13.29□□□□□ -0.28
DDR1-227ENST00000376570 HPS5Q9UPZ3 1129 aa13.29□□□□□ -0.28
DDR1-227ENST00000376570 ZNF804BA4D1E1 1349 aa13.29□□□□□ -0.28
DDR1-227ENST00000376570 VGLL3A8MV65 326 aa13.29□□□□□ -0.28
DDR1-227ENST00000376570 PTGDRQ13258 359 aa13.29□□□□□ -0.28
DDR1-227ENST00000376570 EPC1Q9H2F5 836 aa13.29□□□□□ -0.28
DDR1-227ENST00000376570 LY9Q9HBG7 655 aa13.29□□□□□ -0.28
DDR1-227ENST00000376570 NCAPD2Q15021 1401 aa13.29□□□□□ -0.28
DDR1-227ENST00000376570 VEGFAP15692 232 aaPredicted RBP13.29□□□□□ -0.28
DDR1-227ENST00000376570 TBC1D10BQ4KMP7 808 aaPredicted RBP13.29□□□□□ -0.28
DDR1-227ENST00000376570 GJA10Q969M2 543 aa13.29□□□□□ -0.28
DDR1-227ENST00000376570 DEXIO95424 95 aa13.28□□□□□ -0.28
DDR1-227ENST00000376570 ARHGAP29Q52LW3 1261 aa13.28□□□□□ -0.28
DDR1-227ENST00000376570 INTS5Q6P9B9 1019 aaKnown RBP13.28□□□□□ -0.28
DDR1-227ENST00000376570 DPF2Q92785 391 aa13.28□□□□□ -0.28
DDR1-227ENST00000376570 FAM84BQ96KN1 310 aaPredicted RBP13.28□□□□□ -0.28
DDR1-227ENST00000376570 TRIM47Q96LD4 638 aa13.28□□□□□ -0.28
DDR1-227ENST00000376570 MAGEC2Q9UBF1 373 aaPredicted RBP13.28□□□□□ -0.28
DDR1-227ENST00000376570 CACNB1Q02641 598 aaPredicted RBP13.28□□□□□ -0.28
DDR1-227ENST00000376570 TTC38Q5R3I4 469 aa13.28□□□□□ -0.28
DDR1-227ENST00000376570 SPICE1Q8N0Z3 855 aa13.28□□□□□ -0.28
DDR1-227ENST00000376570 SH3RF3Q8TEJ3 882 aaPredicted RBP13.28□□□□□ -0.28
DDR1-227ENST00000376570 GPR108Q9NPR9 543 aa13.28□□□□□ -0.28
DDR1-227ENST00000376570 ASIC1P78348 528 aa13.28□□□□□ -0.28
DDR1-227ENST00000376570 MYL5Q02045 173 aa13.28□□□□□ -0.28
DDR1-227ENST00000376570 PLS1Q14651 629 aa13.28□□□□□ -0.28
DDR1-227ENST00000376570 ELF2Q15723 593 aa13.28□□□□□ -0.28
DDR1-227ENST00000376570 USH1GQ495M9 461 aa13.28□□□□□ -0.28
DDR1-227ENST00000376570 STAG2Q8N3U4 1231 aa13.28□□□□□ -0.28
DDR1-227ENST00000376570 PNMA1Q8ND90 353 aa13.28□□□□□ -0.28
DDR1-227ENST00000376570 VEZTQ9HBM0 779 aa13.28□□□□□ -0.28
DDR1-227ENST00000376570 CAMTA2O94983 1202 aa13.27□□□□□ -0.28
DDR1-227ENST00000376570 KIF4BQ2VIQ3 1234 aa13.27□□□□□ -0.28
DDR1-227ENST00000376570 CAGE1Q8TC20 777 aa13.27□□□□□ -0.28
DDR1-227ENST00000376570 CCDC12Q8WUD4 166 aaPredicted RBP13.27□□□□□ -0.28
DDR1-227ENST00000376570 ELP1O95163 1332 aa13.27□□□□□ -0.28
DDR1-227ENST00000376570 CCNT1O60563 726 aaKnown RBP13.27□□□□□ -0.29
DDR1-227ENST00000376570 IPO7O95373 1038 aaKnown RBP13.27□□□□□ -0.29
DDR1-227ENST00000376570 POSTNQ15063 836 aa13.27□□□□□ -0.29
DDR1-227ENST00000376570 FCHSD1Q86WN1 690 aa13.27□□□□□ -0.29
DDR1-227ENST00000376570 ENAHQ8N8S7 591 aaPredicted RBP13.27□□□□□ -0.29
DDR1-227ENST00000376570 UBXN4Q92575 508 aa13.27□□□□□ -0.29
DDR1-227ENST00000376570 SYMPKQ92797 1274 aaKnown RBP13.27□□□□□ -0.29
DDR1-227ENST00000376570 GDAP1L1Q96MZ0 367 aa13.27□□□□□ -0.29
DDR1-227ENST00000376570 CEP131Q9UPN4 1083 aa13.27□□□□□ -0.29
DDR1-227ENST00000376570 EPB41L2O43491 1005 aaKnown RBP13.27□□□□□ -0.29
DDR1-227ENST00000376570 RTEL1Q9NZ71 1219 aa13.27□□□□□ -0.29
DDR1-227ENST00000376570 CSF1RP07333 972 aa13.26□□□□□ -0.29
DDR1-227ENST00000376570 BTDP43251 543 aa13.26□□□□□ -0.29
DDR1-227ENST00000376570 ST5P78524 1137 aa13.26□□□□□ -0.29
DDR1-227ENST00000376570 COA7Q96BR5 231 aa13.26□□□□□ -0.29
DDR1-227ENST00000376570 MROH7-TTC4A0A0A0MT08 1334 aa13.26□□□□□ -0.29
DDR1-227ENST00000376570 ZNF76P36508 570 aa13.26□□□□□ -0.29
DDR1-227ENST00000376570 MTIF2P46199 727 aaKnown RBP13.26□□□□□ -0.29
DDR1-227ENST00000376570 SHC4Q6S5L8 630 aa13.26□□□□□ -0.29
DDR1-227ENST00000376570 ZNF215Q9UL58 517 aaPredicted RBP13.26□□□□□ -0.29
DDR1-227ENST00000376570 SORBS3O60504 671 aa13.26□□□□□ -0.29
DDR1-227ENST00000376570 KIF5BP33176 963 aa13.26□□□□□ -0.29
DDR1-227ENST00000376570 SLC39A14Q15043 492 aa13.26□□□□□ -0.29
DDR1-227ENST00000376570 MAEAQ7L5Y9 396 aa13.26□□□□□ -0.29
DDR1-227ENST00000376570 DHX37Q8IY37 1157 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms