RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 CIAO1O76071 339 aa13.82□□□□□ -0.2
C9orf3-203ENST00000375315 FSIP1Q8NA03 581 aa13.82□□□□□ -0.2
C9orf3-203ENST00000375315 RGS17Q9UGC6 210 aaPredicted RBP13.82□□□□□ -0.2
C9orf3-203ENST00000375315 NUP98P52948 1817 aa13.82□□□□□ -0.2
C9orf3-203ENST00000375315 KLRK1P26718 216 aa13.82□□□□□ -0.2
C9orf3-203ENST00000375315 NECTIN1Q15223 517 aa13.82□□□□□ -0.2
C9orf3-203ENST00000375315 ZNF827Q17R98 1081 aa13.82□□□□□ -0.2
C9orf3-203ENST00000375315 LRCH2Q5VUJ6 765 aa13.82□□□□□ -0.2
C9orf3-203ENST00000375315 SRGAP1Q7Z6B7 1085 aa13.82□□□□□ -0.2
C9orf3-203ENST00000375315 GIMAP7Q8NHV1 300 aa13.82□□□□□ -0.2
C9orf3-203ENST00000375315 BRF1Q92994 677 aa13.82□□□□□ -0.2
C9orf3-203ENST00000375315 DHX58Q96C10 678 aa13.82□□□□□ -0.2
C9orf3-203ENST00000375315 DDX11Q96FC9 970 aa13.82□□□□□ -0.2
C9orf3-203ENST00000375315 FAM204AQ9H8W3 233 aa13.82□□□□□ -0.2
C9orf3-203ENST00000375315 RAB21Q9UL25 225 aa13.82□□□□□ -0.2
C9orf3-203ENST00000375315 WNK3Q9BYP7 1800 aa13.82□□□□□ -0.2
C9orf3-203ENST00000375315 FANCCQ00597 558 aa13.81□□□□□ -0.2
C9orf3-203ENST00000375315 DEFB132Q7Z7B7 95 aa13.81□□□□□ -0.2
C9orf3-203ENST00000375315 CEP112Q8N8E3 955 aa13.81□□□□□ -0.2
C9orf3-203ENST00000375315 PLEKHA4Q9H4M7 779 aa13.81□□□□□ -0.2
C9orf3-203ENST00000375315 USP42Q9H9J4 1324 aaKnown RBP13.81□□□□□ -0.2
C9orf3-203ENST00000375315 PHACTR2O75167 634 aa13.81□□□□□ -0.2
C9orf3-203ENST00000375315 LIG3P49916 1009 aa13.81□□□□□ -0.2
C9orf3-203ENST00000375315 RC3H1Q5TC82 1133 aaKnown RBP13.81□□□□□ -0.2
C9orf3-203ENST00000375315 CREB3L3Q68CJ9 461 aa13.81□□□□□ -0.2
C9orf3-203ENST00000375315 GBP6Q6ZN66 633 aa13.81□□□□□ -0.2
C9orf3-203ENST00000375315 KBTBD3Q8NAB2 608 aa13.81□□□□□ -0.2
C9orf3-203ENST00000375315 ENGASEQ8NFI3 743 aa13.81□□□□□ -0.2
C9orf3-203ENST00000375315 AFAP1L1Q8TED9 768 aa13.81□□□□□ -0.2
C9orf3-203ENST00000375315 ERCC4Q92889 916 aaPredicted RBP13.81□□□□□ -0.2
C9orf3-203ENST00000375315 FAM212AQ96EL1 285 aa13.81□□□□□ -0.2
C9orf3-203ENST00000375315 CDC5LQ99459 802 aaKnown RBP13.81□□□□□ -0.2
C9orf3-203ENST00000375315 BTAF1O14981 1849 aa13.81□□□□□ -0.2
C9orf3-203ENST00000375315 CHST3Q7LGC8 479 aa13.81□□□□□ -0.2
C9orf3-203ENST00000375315 POTEDQ86YR6 584 aa13.81□□□□□ -0.2
C9orf3-203ENST00000375315 ANKIB1Q9P2G1 1089 aa13.81□□□□□ -0.2
C9orf3-203ENST00000375315 NUP188Q5SRE5 1749 aa13.81□□□□□ -0.2
C9orf3-203ENST00000375315 CCDC189A1A4V9 331 aa13.8□□□□□ -0.2
C9orf3-203ENST00000375315 PPP1R12AO14974 1030 aaPredicted RBP13.8□□□□□ -0.2
C9orf3-203ENST00000375315 GYS1P13807 737 aa13.8□□□□□ -0.2
C9orf3-203ENST00000375315 STK3Q13188 491 aa13.8□□□□□ -0.2
C9orf3-203ENST00000375315 CASP8Q14790 479 aa13.8□□□□□ -0.2
C9orf3-203ENST00000375315 DPCR1Q3MIW9 517 aa13.8□□□□□ -0.2
C9orf3-203ENST00000375315 SLC9C2Q5TAH2 1124 aa13.8□□□□□ -0.2
C9orf3-203ENST00000375315 CCDC12Q8WUD4 166 aaPredicted RBP13.8□□□□□ -0.2
C9orf3-203ENST00000375315 ZSWIM4Q9H7M6 989 aa13.8□□□□□ -0.2
C9orf3-203ENST00000375315 ABCB6Q9NP58 842 aa13.8□□□□□ -0.2
C9orf3-203ENST00000375315 SERPINB2P05120 415 aa13.8□□□□□ -0.2
C9orf3-203ENST00000375315 TUBBP07437 444 aa13.8□□□□□ -0.2
C9orf3-203ENST00000375315 SLC5A1P13866 664 aa13.8□□□□□ -0.2
C9orf3-203ENST00000375315 RPS8P62241 208 aaKnown RBP13.8□□□□□ -0.2
C9orf3-203ENST00000375315 PUM3Q15397 648 aaKnown RBP13.8□□□□□ -0.2
C9orf3-203ENST00000375315 MSANTD4Q8NCY6 345 aa13.8□□□□□ -0.2
C9orf3-203ENST00000375315 STAG1Q8WVM7 1258 aa13.8□□□□□ -0.2
C9orf3-203ENST00000375315 KAT2BQ92831 832 aa13.8□□□□□ -0.2
C9orf3-203ENST00000375315 ZNF396Q96N95 335 aaPredicted RBP13.8□□□□□ -0.2
C9orf3-203ENST00000375315 TOP1P11387 765 aaKnown RBP13.79□□□□□ -0.2
C9orf3-203ENST00000375315 ME1P48163 572 aa13.79□□□□□ -0.2
C9orf3-203ENST00000375315 EZH2Q15910 746 aaKnown RBP13.79□□□□□ -0.2
C9orf3-203ENST00000375315 SLC4A8Q2Y0W8 1093 aa13.79□□□□□ -0.2
C9orf3-203ENST00000375315 ATL3Q6DD88 541 aa13.79□□□□□ -0.2
C9orf3-203ENST00000375315 KIFC2Q96AC6 838 aa13.79□□□□□ -0.2
C9orf3-203ENST00000375315 ALDH8A1Q9H2A2 487 aaPredicted RBP13.79□□□□□ -0.2
C9orf3-203ENST00000375315 ANKZF1Q9H8Y5 726 aa13.79□□□□□ -0.2
C9orf3-203ENST00000375315 WDHD1O75717 1129 aaPredicted RBP13.79□□□□□ -0.2
C9orf3-203ENST00000375315 UBASH3AP57075 661 aa13.79□□□□□ -0.2
C9orf3-203ENST00000375315 PIH1D3Q9NQM4 214 aaKnown RBP13.79□□□□□ -0.2
C9orf3-203ENST00000375315 KIAA1468Q9P260 1216 aa13.79□□□□□ -0.2
C9orf3-203ENST00000375315 N4BP2Q86UW6 1770 aaPredicted RBP13.79□□□□□ -0.2
C9orf3-203ENST00000375315 TAF1P21675 1872 aa13.79□□□□□ -0.2
C9orf3-203ENST00000375315 EBAG9O00559 213 aa13.79□□□□□ -0.2
C9orf3-203ENST00000375315 CUTAO60888 179 aa13.79□□□□□ -0.2
C9orf3-203ENST00000375315 LMOD1P29536 600 aaPredicted RBP13.79□□□□□ -0.2
C9orf3-203ENST00000375315 OLFM4Q6UX06 510 aa13.79□□□□□ -0.2
C9orf3-203ENST00000375315 MIGA1Q8NAN2 632 aa13.79□□□□□ -0.2
C9orf3-203ENST00000375315 LPIN2Q92539 896 aa13.79□□□□□ -0.2
C9orf3-203ENST00000375315 OSBP2Q969R2 916 aa13.79□□□□□ -0.2
C9orf3-203ENST00000375315 PDGFDQ9GZP0 370 aaPredicted RBP13.79□□□□□ -0.2
C9orf3-203ENST00000375315 A1CFQ9NQ94 594 aaKnown RBP13.79□□□□□ -0.2
C9orf3-203ENST00000375315 RBM28Q9NW13 759 aaKnown RBP13.79□□□□□ -0.2
C9orf3-203ENST00000375315 RAI14Q9P0K7 980 aa13.79□□□□□ -0.2
C9orf3-203ENST00000375315 M0R2C6 588 aa13.78□□□□□ -0.2
C9orf3-203ENST00000375315 SERPINC1P01008 464 aa13.78□□□□□ -0.2
C9orf3-203ENST00000375315 RPS6KB1P23443 525 aa13.78□□□□□ -0.2
C9orf3-203ENST00000375315 RASGRF1Q13972 1273 aa13.78□□□□□ -0.2
C9orf3-203ENST00000375315 MCMDC2Q4G0Z9 681 aa13.78□□□□□ -0.2
C9orf3-203ENST00000375315 COL23A1Q86Y22 540 aaPredicted RBP13.78□□□□□ -0.2
C9orf3-203ENST00000375315 MRPS27Q92552 414 aaKnown RBP13.78□□□□□ -0.2
C9orf3-203ENST00000375315 NYXQ9GZU5 481 aa13.78□□□□□ -0.2
C9orf3-203ENST00000375315 PUS7LQ9H0K6 701 aaKnown RBP13.78□□□□□ -0.2
C9orf3-203ENST00000375315 MINPP1Q9UNW1 487 aa13.78□□□□□ -0.2
C9orf3-203ENST00000375315 ZNF609O15014 1411 aa13.78□□□□□ -0.2
C9orf3-203ENST00000375315 CFAP100Q494V2 611 aa13.78□□□□□ -0.2
C9orf3-203ENST00000375315 PRR5LQ6MZQ0 368 aa13.78□□□□□ -0.2
C9orf3-203ENST00000375315 CTCFLQ8NI51 663 aaPredicted RBP13.78□□□□□ -0.2
C9orf3-203ENST00000375315 RPGRQ92834 1020 aaKnown RBP13.78□□□□□ -0.2
C9orf3-203ENST00000375315 GNL3LQ9NVN8 582 aaKnown RBP13.78□□□□□ -0.2
C9orf3-203ENST00000375315 LRP2BPQ9P2M1 347 aa13.78□□□□□ -0.2
C9orf3-203ENST00000375315 C21orf2O43822 256 aa13.77□□□□□ -0.2
C9orf3-203ENST00000375315 JAK2O60674 1132 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms