RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 LMBR1LQ6UX01 489 aa20.72■□□□□ 0.91
MMP9-201ENST00000372330 DBNDD2Q9BQY9 259 aa20.72■□□□□ 0.91
MMP9-201ENST00000372330 NDUFB9Q9Y6M9 179 aa20.72■□□□□ 0.91
MMP9-201ENST00000372330 PCDH11XQ9BZA7 1347 aa20.72■□□□□ 0.91
MMP9-201ENST00000372330 PCDH11YQ9BZA8 1340 aa20.72■□□□□ 0.91
MMP9-201ENST00000372330 FAM237AA0A1B0GTK4 181 aa20.71■□□□□ 0.91
MMP9-201ENST00000372330 ZNF18P17022 549 aa20.71■□□□□ 0.91
MMP9-201ENST00000372330 USP14P54578 494 aa20.71■□□□□ 0.91
MMP9-201ENST00000372330 ANO1Q5XXA6 986 aa20.71■□□□□ 0.91
MMP9-201ENST00000372330 TOM1L2Q6ZVM7 507 aa20.71■□□□□ 0.91
MMP9-201ENST00000372330 ELOA2Q8IYF1 753 aaPredicted RBP20.71■□□□□ 0.91
MMP9-201ENST00000372330 DACH1Q9UI36 760 aa20.71■□□□□ 0.91
MMP9-201ENST00000372330 HPSEQ9Y251 543 aa20.71■□□□□ 0.91
MMP9-201ENST00000372330 WDR17Q8IZU2 1322 aa20.71■□□□□ 0.91
MMP9-201ENST00000372330 SOWAHDA6NJG2 315 aa20.71■□□□□ 0.91
MMP9-201ENST00000372330 PATL2C9JE40 543 aaKnown RBP20.71■□□□□ 0.91
MMP9-201ENST00000372330 H7C1W4 665 aa20.71■□□□□ 0.91
MMP9-201ENST00000372330 MTF1Q14872 753 aa20.71■□□□□ 0.91
MMP9-201ENST00000372330 NBPF20Q3BBV1 942 aa20.71■□□□□ 0.91
MMP9-201ENST00000372330 SLC35F6Q8N357 371 aa20.71■□□□□ 0.91
MMP9-201ENST00000372330 JMYQ8N9B5 988 aa20.71■□□□□ 0.91
MMP9-201ENST00000372330 NOA1Q8NC60 698 aaKnown RBP20.71■□□□□ 0.91
MMP9-201ENST00000372330 RPGRIP1Q96KN7 1286 aa20.71■□□□□ 0.91
MMP9-201ENST00000372330 HOOK1Q9UJC3 728 aaKnown RBP20.71■□□□□ 0.91
MMP9-201ENST00000372330 MYO6Q9UM54 1294 aa20.71■□□□□ 0.91
MMP9-201ENST00000372330 CHGBP05060 677 aa20.7■□□□□ 0.9
MMP9-201ENST00000372330 GGCXP38435 758 aa20.7■□□□□ 0.9
MMP9-201ENST00000372330 CCT2P78371 535 aaKnown RBP20.7■□□□□ 0.9
MMP9-201ENST00000372330 NR1I3Q14994 352 aa20.7■□□□□ 0.9
MMP9-201ENST00000372330 YTHDF3Q7Z739 585 aaKnown RBP20.7■□□□□ 0.9
MMP9-201ENST00000372330 FMNL3Q8IVF7 1028 aa20.7■□□□□ 0.9
MMP9-201ENST00000372330 OTUD6BQ8N6M0 293 aa20.7■□□□□ 0.9
MMP9-201ENST00000372330 ZCRB1Q8TBF4 217 aaKnown RBP20.7■□□□□ 0.9
MMP9-201ENST00000372330 ENOX1Q8TC92 643 aaKnown RBP20.7■□□□□ 0.9
MMP9-201ENST00000372330 HAUS7Q99871 368 aa20.7■□□□□ 0.9
MMP9-201ENST00000372330 GCFC2P16383 781 aaKnown RBP20.7■□□□□ 0.9
MMP9-201ENST00000372330 FOXO4P98177 505 aa20.7■□□□□ 0.9
MMP9-201ENST00000372330 EXOSC10Q01780 885 aaKnown RBP20.7■□□□□ 0.9
MMP9-201ENST00000372330 SLC39A14Q15043 492 aa20.7■□□□□ 0.9
MMP9-201ENST00000372330 RAD9BQ6WBX8 426 aa20.7■□□□□ 0.9
MMP9-201ENST00000372330 NUTM2AQ8IVF1 878 aaPredicted RBP20.7■□□□□ 0.9
MMP9-201ENST00000372330 ZKSCAN4Q969J2 545 aaPredicted RBP20.7■□□□□ 0.9
MMP9-201ENST00000372330 SCP2P22307 547 aa20.69■□□□□ 0.9
MMP9-201ENST00000372330 PPP2R5AQ15172 486 aa20.69■□□□□ 0.9
MMP9-201ENST00000372330 PTPN21Q16825 1174 aa20.69■□□□□ 0.9
MMP9-201ENST00000372330 MICALCLQ6ZW33 695 aa20.69■□□□□ 0.9
MMP9-201ENST00000372330 PPFIBP1Q86W92 1011 aa20.69■□□□□ 0.9
MMP9-201ENST00000372330 CCDC51Q96ER9 411 aa20.69■□□□□ 0.9
MMP9-201ENST00000372330 SEC62Q99442 399 aaKnown RBP20.69■□□□□ 0.9
MMP9-201ENST00000372330 LRRC2Q9BYS8 371 aa20.69■□□□□ 0.9
MMP9-201ENST00000372330 ERVV-2B6SEH9 535 aa20.69■□□□□ 0.9
MMP9-201ENST00000372330 PDIA3P30101 505 aaKnown RBP20.69■□□□□ 0.9
MMP9-201ENST00000372330 CRYMQ14894 314 aa20.69■□□□□ 0.9
MMP9-201ENST00000372330 WLSQ5T9L3 541 aa20.69■□□□□ 0.9
MMP9-201ENST00000372330 CPLX2Q6PUV4 134 aaKnown RBP20.69■□□□□ 0.9
MMP9-201ENST00000372330 ABCA3Q99758 1704 aa20.68■□□□□ 0.9
MMP9-201ENST00000372330 MEFVO15553 781 aaPredicted RBP20.68■□□□□ 0.9
MMP9-201ENST00000372330 PPP6R2O75170 966 aa20.68■□□□□ 0.9
MMP9-201ENST00000372330 POLR3DP05423 398 aaPredicted RBP20.68■□□□□ 0.9
MMP9-201ENST00000372330 MRPL12P52815 198 aaKnown RBP20.68■□□□□ 0.9
MMP9-201ENST00000372330 AKAP17AQ02040 695 aaKnown RBP20.68■□□□□ 0.9
MMP9-201ENST00000372330 TTLL7Q6ZT98 887 aa20.68■□□□□ 0.9
MMP9-201ENST00000372330 TEX11Q8IYF3 940 aa20.68■□□□□ 0.9
MMP9-201ENST00000372330 C8orf76Q96K31 380 aa20.68■□□□□ 0.9
MMP9-201ENST00000372330 COL5A2P05997 1499 aaPredicted RBP20.68■□□□□ 0.9
MMP9-201ENST00000372330 ZNF609O15014 1411 aa20.68■□□□□ 0.9
MMP9-201ENST00000372330 FDPSP14324 419 aaKnown RBP20.67■□□□□ 0.9
MMP9-201ENST00000372330 AMPD2Q01433 879 aa20.67■□□□□ 0.9
MMP9-201ENST00000372330 PNOCQ13519 176 aa20.67■□□□□ 0.9
MMP9-201ENST00000372330 CCDC102BQ68D86 513 aa20.67■□□□□ 0.9
MMP9-201ENST00000372330 MLKLQ8NB16 471 aa20.67■□□□□ 0.9
MMP9-201ENST00000372330 SH3GL2Q99962 352 aa20.67■□□□□ 0.9
MMP9-201ENST00000372330 CWC25Q9NXE8 425 aaPredicted RBP20.67■□□□□ 0.9
MMP9-201ENST00000372330 GOLGA8KD6RF30 607 aa20.67■□□□□ 0.9
MMP9-201ENST00000372330 GOLIM4O00461 696 aa20.67■□□□□ 0.9
MMP9-201ENST00000372330 PLCB4Q15147 1175 aa20.67■□□□□ 0.9
MMP9-201ENST00000372330 C11orf91Q3C1V1 193 aa20.67■□□□□ 0.9
MMP9-201ENST00000372330 NFE2L3Q9Y4A8 694 aa20.67■□□□□ 0.9
MMP9-201ENST00000372330 A0A1B0GTH6 734 aa20.66■□□□□ 0.9
MMP9-201ENST00000372330 GOLGA6BA6NDN3 693 aa20.66■□□□□ 0.9
MMP9-201ENST00000372330 AGPSO00116 658 aa20.66■□□□□ 0.9
MMP9-201ENST00000372330 IRX1P78414 480 aaPredicted RBP20.66■□□□□ 0.9
MMP9-201ENST00000372330 MCMDC2Q4G0Z9 681 aa20.66■□□□□ 0.9
MMP9-201ENST00000372330 N4BP2L2Q92802 583 aaPredicted RBP20.66■□□□□ 0.9
MMP9-201ENST00000372330 FAXDC2Q96IV6 333 aa20.66■□□□□ 0.9
MMP9-201ENST00000372330 ODF2LQ9ULJ1 636 aa20.66■□□□□ 0.9
MMP9-201ENST00000372330 GRIN2DO15399 1336 aa20.66■□□□□ 0.9
MMP9-201ENST00000372330 DDX46Q7L014 1031 aaKnown RBP20.66■□□□□ 0.9
MMP9-201ENST00000372330 ATG9AQ7Z3C6 839 aa20.66■□□□□ 0.9
MMP9-201ENST00000372330 FBXL16Q8N461 479 aa20.66■□□□□ 0.9
MMP9-201ENST00000372330 KBTBD3Q8NAB2 608 aa20.66■□□□□ 0.9
MMP9-201ENST00000372330 PAGR1Q9BTK6 254 aa20.66■□□□□ 0.9
MMP9-201ENST00000372330 NCOA5Q9HCD5 579 aaKnown RBP20.66■□□□□ 0.9
MMP9-201ENST00000372330 STRN4Q9NRL3 753 aa20.66■□□□□ 0.9
MMP9-201ENST00000372330 A1BGP04217 495 aa20.65■□□□□ 0.9
MMP9-201ENST00000372330 FECHP22830 423 aa20.65■□□□□ 0.9
MMP9-201ENST00000372330 SMTNP53814 917 aa20.65■□□□□ 0.9
MMP9-201ENST00000372330 GNGT1P63211 74 aa20.65■□□□□ 0.9
MMP9-201ENST00000372330 MAP2K1Q02750 393 aaPredicted RBP20.65■□□□□ 0.9
MMP9-201ENST00000372330 NKX1-1Q15270 411 aaPredicted RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms