RNA–Protein interactions for RNA: ENST00000371209.5

TCTN3-202, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 1,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-202ENST00000371209 EHD4Q9H223 541 aa12.42□□□□□ -0.42
TCTN3-202ENST00000371209 DNAJC18Q9H819 358 aa12.42□□□□□ -0.42
TCTN3-202ENST00000371209 PI4KBQ9UBF8 816 aa12.42□□□□□ -0.42
TCTN3-202ENST00000371209 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.42□□□□□ -0.42
TCTN3-202ENST00000371209 SSC5DA1L4H1 1573 aa12.42□□□□□ -0.42
TCTN3-202ENST00000371209 PRDM1O75626 825 aa12.41□□□□□ -0.42
TCTN3-202ENST00000371209 HLA-DOAP06340 250 aa12.41□□□□□ -0.42
TCTN3-202ENST00000371209 FGRP09769 529 aa12.41□□□□□ -0.42
TCTN3-202ENST00000371209 ZKSCAN1P17029 563 aaPredicted RBP12.41□□□□□ -0.42
TCTN3-202ENST00000371209 MAP1SQ66K74 1059 aaPredicted RBP12.41□□□□□ -0.42
TCTN3-202ENST00000371209 C16orf86Q6ZW13 317 aa12.41□□□□□ -0.42
TCTN3-202ENST00000371209 METTL16Q86W50 562 aaKnown RBP12.41□□□□□ -0.42
TCTN3-202ENST00000371209 LDHDQ86WU2 507 aa12.41□□□□□ -0.42
TCTN3-202ENST00000371209 IFNLR1Q8IU57 520 aaPredicted RBP12.41□□□□□ -0.42
TCTN3-202ENST00000371209 SULF1Q8IWU6 871 aa12.41□□□□□ -0.42
TCTN3-202ENST00000371209 GLIS2Q9BZE0 524 aaPredicted RBP12.41□□□□□ -0.42
TCTN3-202ENST00000371209 SCUBE2Q9NQ36 999 aa12.41□□□□□ -0.42
TCTN3-202ENST00000371209 SERPINB13Q9UIV8 391 aa12.41□□□□□ -0.42
TCTN3-202ENST00000371209 PPP2R3BQ9Y5P8 575 aa12.41□□□□□ -0.42
TCTN3-202ENST00000371209 SHMT1P34896 483 aa12.4□□□□□ -0.42
TCTN3-202ENST00000371209 CDK8P49336 464 aa12.4□□□□□ -0.42
TCTN3-202ENST00000371209 MFSD6Q6ZSS7 791 aa12.4□□□□□ -0.42
TCTN3-202ENST00000371209 JAKMIP1Q96N16 626 aaKnown RBP12.4□□□□□ -0.42
TCTN3-202ENST00000371209 GPBP1L1Q9HC44 474 aaPredicted RBP12.4□□□□□ -0.42
TCTN3-202ENST00000371209 B4E1Z4 1266 aa12.4□□□□□ -0.43
TCTN3-202ENST00000371209 ORC4O43929 436 aa12.4□□□□□ -0.43
TCTN3-202ENST00000371209 SLC3A2P08195 630 aaKnown RBP12.4□□□□□ -0.43
TCTN3-202ENST00000371209 CPA1P15085 419 aa12.4□□□□□ -0.43
TCTN3-202ENST00000371209 RASA1P20936 1047 aa12.4□□□□□ -0.43
TCTN3-202ENST00000371209 MAP3K10Q02779 954 aa12.4□□□□□ -0.43
TCTN3-202ENST00000371209 KRT32Q14532 448 aa12.4□□□□□ -0.43
TCTN3-202ENST00000371209 GSE1Q14687 1217 aa12.4□□□□□ -0.43
TCTN3-202ENST00000371209 MIGA2Q7L4E1 593 aa12.4□□□□□ -0.43
TCTN3-202ENST00000371209 FOXP4Q8IVH2 680 aaPredicted RBP12.4□□□□□ -0.43
TCTN3-202ENST00000371209 CRACR2BQ8N4Y2 399 aaPredicted RBP12.4□□□□□ -0.43
TCTN3-202ENST00000371209 RNF41Q9H4P4 317 aaPredicted RBP12.4□□□□□ -0.43
TCTN3-202ENST00000371209 TRAF5O00463 557 aa12.39□□□□□ -0.43
TCTN3-202ENST00000371209 KIF3CO14782 793 aa12.39□□□□□ -0.43
TCTN3-202ENST00000371209 TBC1D12O60347 775 aa12.39□□□□□ -0.43
TCTN3-202ENST00000371209 YY1P25490 414 aa12.39□□□□□ -0.43
TCTN3-202ENST00000371209 FMR1Q06787 632 aaKnown RBP eCLIP12.39□□□□□ -0.43
TCTN3-202ENST00000371209 PDE4BQ07343 736 aa12.39□□□□□ -0.43
TCTN3-202ENST00000371209 RRP1BQ14684 758 aaKnown RBP12.39□□□□□ -0.43
TCTN3-202ENST00000371209 RRP12Q5JTH9 1297 aaKnown RBP12.39□□□□□ -0.43
TCTN3-202ENST00000371209 TATDN1Q6P1N9 297 aa12.39□□□□□ -0.43
TCTN3-202ENST00000371209 CDC37L1Q7L3B6 337 aa12.39□□□□□ -0.43
TCTN3-202ENST00000371209 MB21D2Q8IYB1 491 aaPredicted RBP12.39□□□□□ -0.43
TCTN3-202ENST00000371209 CDCA5Q96FF9 252 aa12.39□□□□□ -0.43
TCTN3-202ENST00000371209 NEK1Q96PY6 1258 aa12.39□□□□□ -0.43
TCTN3-202ENST00000371209 TM6SF1Q9BZW5 370 aa12.39□□□□□ -0.43
TCTN3-202ENST00000371209 SWAP70Q9UH65 585 aa12.39□□□□□ -0.43
TCTN3-202ENST00000371209 HERC5Q9UII4 1024 aaKnown RBP12.39□□□□□ -0.43
TCTN3-202ENST00000371209 KDM4AO75164 1064 aa12.38□□□□□ -0.43
TCTN3-202ENST00000371209 PCP11498 1178 aaKnown RBP12.38□□□□□ -0.43
TCTN3-202ENST00000371209 CASTP20810 708 aaKnown RBP12.38□□□□□ -0.43
TCTN3-202ENST00000371209 ANTXR2P58335 489 aa12.38□□□□□ -0.43
TCTN3-202ENST00000371209 NBR1Q14596 966 aa12.38□□□□□ -0.43
TCTN3-202ENST00000371209 SHROOM1Q2M3G4 852 aaPredicted RBP12.38□□□□□ -0.43
TCTN3-202ENST00000371209 CYB5R4Q7L1T6 521 aa12.38□□□□□ -0.43
TCTN3-202ENST00000371209 NCOA7Q8NI08 942 aa12.38□□□□□ -0.43
TCTN3-202ENST00000371209 UPF3BQ9BZI7 483 aaKnown RBP12.38□□□□□ -0.43
TCTN3-202ENST00000371209 CNNM2Q9H8M5 875 aa12.38□□□□□ -0.43
TCTN3-202ENST00000371209 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.38□□□□□ -0.436e-7■■■□□ 18.3
TCTN3-202ENST00000371209 MKNK2Q9HBH9 465 aa12.38□□□□□ -0.43
TCTN3-202ENST00000371209 ZSWIM6Q9HCJ5 1215 aa12.38□□□□□ -0.43
TCTN3-202ENST00000371209 TOMM22Q9NS69 142 aa12.38□□□□□ -0.43
TCTN3-202ENST00000371209 FZD1Q9UP38 647 aa12.38□□□□□ -0.43
TCTN3-202ENST00000371209 PHF20L1A8MW92 1017 aa12.37□□□□□ -0.43
TCTN3-202ENST00000371209 RANBP6O60518 1105 aaKnown RBP12.37□□□□□ -0.43
TCTN3-202ENST00000371209 JAG1P78504 1218 aa12.37□□□□□ -0.43
TCTN3-202ENST00000371209 SUPT20HL1Q3ZLR7 823 aa12.37□□□□□ -0.43
TCTN3-202ENST00000371209 FAM47AQ5JRC9 791 aa12.37□□□□□ -0.43
TCTN3-202ENST00000371209 CHST3Q7LGC8 479 aa12.37□□□□□ -0.43
TCTN3-202ENST00000371209 RALYLQ86SE5 291 aaKnown RBP12.37□□□□□ -0.43
TCTN3-202ENST00000371209 TCEANC2Q96MN5 208 aa12.37□□□□□ -0.43
TCTN3-202ENST00000371209 TRIM34Q9BYJ4 488 aa12.37□□□□□ -0.43
TCTN3-202ENST00000371209 KRT23Q9C075 422 aa12.37□□□□□ -0.43
TCTN3-202ENST00000371209 ZSWIM5Q9P217 1185 aa12.37□□□□□ -0.43
TCTN3-202ENST00000371209 TAOK2Q9UL54 1235 aa12.37□□□□□ -0.43
TCTN3-202ENST00000371209 AKR1B1P15121 316 aa12.36□□□□□ -0.43
TCTN3-202ENST00000371209 RPS6KB1P23443 525 aa12.36□□□□□ -0.43
TCTN3-202ENST00000371209 PSMA5P28066 241 aa12.36□□□□□ -0.43
TCTN3-202ENST00000371209 TFAP4Q01664 338 aa12.36□□□□□ -0.43
TCTN3-202ENST00000371209 EXOSC10Q01780 885 aaKnown RBP12.36□□□□□ -0.43
TCTN3-202ENST00000371209 TRDNQ13061 729 aa12.36□□□□□ -0.43
TCTN3-202ENST00000371209 BLOC1S2Q6QNY1 142 aa12.36□□□□□ -0.43
TCTN3-202ENST00000371209 RUFY3Q7L099 469 aa12.36□□□□□ -0.43
TCTN3-202ENST00000371209 ZNF784Q8NCA9 323 aaPredicted RBP12.36□□□□□ -0.43
TCTN3-202ENST00000371209 ESR2Q92731 530 aa12.36□□□□□ -0.43
TCTN3-202ENST00000371209 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.36□□□□□ -0.43
TCTN3-202ENST00000371209 ZNF287Q9HBT7 754 aa12.36□□□□□ -0.43
TCTN3-202ENST00000371209 MYH8P13535 1937 aa12.36□□□□□ -0.43
TCTN3-202ENST00000371209 PAPPA2Q9BXP8 1791 aa12.36□□□□□ -0.43
TCTN3-202ENST00000371209 PRC1O43663 620 aa12.35□□□□□ -0.43
TCTN3-202ENST00000371209 GDF11O95390 407 aa12.35□□□□□ -0.43
TCTN3-202ENST00000371209 ITGBL1O95965 494 aaPredicted RBP12.35□□□□□ -0.43
TCTN3-202ENST00000371209 IRX5P78411 483 aaPredicted RBP12.35□□□□□ -0.43
TCTN3-202ENST00000371209 PRKG1Q13976 671 aa12.35□□□□□ -0.43
TCTN3-202ENST00000371209 CERKLQ49MI3 558 aaPredicted RBP12.35□□□□□ -0.43
TCTN3-202ENST00000371209 LCE2DQ5TA82 110 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms