RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 FMNL3Q8IVF7 1028 aa20.24■□□□□ 0.83
CHTOP-201ENST00000368686 GDAP1L1Q96MZ0 367 aa20.24■□□□□ 0.83
CHTOP-201ENST00000368686 MED15Q96RN5 788 aa20.24■□□□□ 0.83
CHTOP-201ENST00000368686 MMS19Q96T76 1030 aa20.24■□□□□ 0.83
CHTOP-201ENST00000368686 RABEP2Q9H5N1 569 aa20.24■□□□□ 0.83
CHTOP-201ENST00000368686 KLC4Q9NSK0 619 aa20.24■□□□□ 0.83
CHTOP-201ENST00000368686 SAR1BQ9Y6B6 198 aa20.24■□□□□ 0.83
CHTOP-201ENST00000368686 METP08581 1390 aa20.24■□□□□ 0.83
CHTOP-201ENST00000368686 MYH8P13535 1937 aa20.23■□□□□ 0.83
CHTOP-201ENST00000368686 GYPCP04921 128 aa20.23■□□□□ 0.83
CHTOP-201ENST00000368686 EPB41P11171 864 aaKnown RBP20.23■□□□□ 0.83
CHTOP-201ENST00000368686 UBE3BQ7Z3V4 1068 aa20.23■□□□□ 0.83
CHTOP-201ENST00000368686 ERVK-24P63145 666 aa20.23■□□□□ 0.83
CHTOP-201ENST00000368686 DDX46Q7L014 1031 aaKnown RBP20.23■□□□□ 0.83
CHTOP-201ENST00000368686 IQCA1Q86XH1 822 aa20.23■□□□□ 0.83
CHTOP-201ENST00000368686 AENQ8WTP8 325 aaKnown RBP20.23■□□□□ 0.83
CHTOP-201ENST00000368686 NDUFB9Q9Y6M9 179 aa20.23■□□□□ 0.83
CHTOP-201ENST00000368686 NWD1Q149M9 1564 aa20.23■□□□□ 0.83
CHTOP-201ENST00000368686 KLF18A0A0U1RQI7 1052 aa20.22■□□□□ 0.83
CHTOP-201ENST00000368686 SPATA1Q5VX52 437 aa20.22■□□□□ 0.83
CHTOP-201ENST00000368686 RUBCNQ92622 972 aa20.22■□□□□ 0.83
CHTOP-201ENST00000368686 VCPKMTQ9H867 229 aa20.22■□□□□ 0.83
CHTOP-201ENST00000368686 HPS5Q9UPZ3 1129 aa20.22■□□□□ 0.83
CHTOP-201ENST00000368686 PTPRUQ92729 1446 aa20.22■□□□□ 0.83
CHTOP-201ENST00000368686 SEMA3EO15041 775 aa20.22■□□□□ 0.83
CHTOP-201ENST00000368686 MYBL2P10244 700 aa20.22■□□□□ 0.83
CHTOP-201ENST00000368686 HSPD1P10809 573 aaKnown RBP20.22■□□□□ 0.83
CHTOP-201ENST00000368686 FXR1P51114 621 aaKnown RBP eCLIP20.22■□□□□ 0.83
CHTOP-201ENST00000368686 PAPD7Q5XG87 772 aaKnown RBP20.22■□□□□ 0.83
CHTOP-201ENST00000368686 CCDC70Q6NSX1 233 aa20.22■□□□□ 0.83
CHTOP-201ENST00000368686 KRI1Q8N9T8 703 aaKnown RBP20.22■□□□□ 0.83
CHTOP-201ENST00000368686 ZNF827Q17R98 1081 aa20.21■□□□□ 0.83
CHTOP-201ENST00000368686 IQCEQ6IPM2 695 aa20.21■□□□□ 0.83
CHTOP-201ENST00000368686 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.21■□□□□ 0.83
CHTOP-201ENST00000368686 DHX37Q8IY37 1157 aaKnown RBP20.21■□□□□ 0.83
CHTOP-201ENST00000368686 GSPT2Q8IYD1 628 aaKnown RBP20.21■□□□□ 0.83
CHTOP-201ENST00000368686 KLHDC4Q8TBB5 520 aa20.21■□□□□ 0.83
CHTOP-201ENST00000368686 ABHD10Q9NUJ1 306 aa20.21■□□□□ 0.83
CHTOP-201ENST00000368686 CEP85LQ5SZL2 805 aa20.2■□□□□ 0.82
CHTOP-201ENST00000368686 HAUS4Q9H6D7 363 aa20.2■□□□□ 0.82
CHTOP-201ENST00000368686 C4AP0C0L4 1744 aa20.2■□□□□ 0.82
CHTOP-201ENST00000368686 C4BP0C0L5 1744 aa20.2■□□□□ 0.82
CHTOP-201ENST00000368686 A0A0G2JLW4 131 aa20.2■□□□□ 0.82
CHTOP-201ENST00000368686 RASSF9O75901 435 aa20.2■□□□□ 0.82
CHTOP-201ENST00000368686 ACTN3Q08043 901 aaPredicted RBP20.2■□□□□ 0.82
CHTOP-201ENST00000368686 TRIM14Q14142 442 aa20.2■□□□□ 0.82
CHTOP-201ENST00000368686 C11orf91Q3C1V1 193 aa20.2■□□□□ 0.82
CHTOP-201ENST00000368686 CCDC40Q4G0X9 1142 aa20.2■□□□□ 0.82
CHTOP-201ENST00000368686 KANK3Q6NY19 840 aa20.2■□□□□ 0.82
CHTOP-201ENST00000368686 GPHNQ9NQX3 736 aaPredicted RBP20.2■□□□□ 0.82
CHTOP-201ENST00000368686 ZMYND10O75800 440 aa20.19■□□□□ 0.82
CHTOP-201ENST00000368686 IRX1P78414 480 aaPredicted RBP20.19■□□□□ 0.82
CHTOP-201ENST00000368686 DRP2Q13474 957 aa20.19■□□□□ 0.82
CHTOP-201ENST00000368686 ZMYM1Q5SVZ6 1142 aa20.19■□□□□ 0.82
CHTOP-201ENST00000368686 CDKAL1Q5VV42 579 aa20.19■□□□□ 0.82
CHTOP-201ENST00000368686 SLF1Q9BQI6 1058 aa20.19■□□□□ 0.82
CHTOP-201ENST00000368686 COPRSQ9NQ92 184 aa20.19■□□□□ 0.82
CHTOP-201ENST00000368686 GGA2Q9UJY4 613 aa20.19■□□□□ 0.82
CHTOP-201ENST00000368686 GUCA1BQ9UMX6 200 aa20.19■□□□□ 0.82
CHTOP-201ENST00000368686 NEBLO76041 1014 aa20.19■□□□□ 0.82
CHTOP-201ENST00000368686 CDR1P51861 262 aa20.19■□□□□ 0.82
CHTOP-201ENST00000368686 NAP1L1P55209 391 aaKnown RBP20.19■□□□□ 0.82
CHTOP-201ENST00000368686 CCDC50Q8IVM0 306 aa20.19■□□□□ 0.82
CHTOP-201ENST00000368686 ALG1Q9BT22 464 aa20.19■□□□□ 0.82
CHTOP-201ENST00000368686 SYNRGQ9UMZ2 1314 aa20.19■□□□□ 0.82
CHTOP-201ENST00000368686 DDX60Q8IY21 1712 aaKnown RBP20.18■□□□□ 0.82
CHTOP-201ENST00000368686 PATL2C9JE40 543 aaKnown RBP20.18■□□□□ 0.82
CHTOP-201ENST00000368686 ALS2CLQ60I27 953 aa20.18■□□□□ 0.82
CHTOP-201ENST00000368686 EHBP1Q8NDI1 1231 aa20.18■□□□□ 0.82
CHTOP-201ENST00000368686 RUFY1Q96T51 708 aa20.18■□□□□ 0.82
CHTOP-201ENST00000368686 HDAC6Q9UBN7 1215 aa20.18■□□□□ 0.82
CHTOP-201ENST00000368686 WDR17Q8IZU2 1322 aa20.18■□□□□ 0.82
CHTOP-201ENST00000368686 A0A1B0GUA9 196 aa20.18■□□□□ 0.82
CHTOP-201ENST00000368686 GOLIM4O00461 696 aa20.18■□□□□ 0.82
CHTOP-201ENST00000368686 ATP1A1P05023 1023 aaKnown RBP20.18■□□□□ 0.82
CHTOP-201ENST00000368686 PDCLQ13371 301 aa20.18■□□□□ 0.82
CHTOP-201ENST00000368686 KRT40Q6A162 431 aa20.18■□□□□ 0.82
CHTOP-201ENST00000368686 TTC19Q6DKK2 380 aaPredicted RBP20.18■□□□□ 0.82
CHTOP-201ENST00000368686 SND1Q7KZF4 910 aaKnown RBP eCLIP20.18■□□□□ 0.82
CHTOP-201ENST00000368686 ENC1O14682 589 aa20.17■□□□□ 0.82
CHTOP-201ENST00000368686 PRC1O43663 620 aa20.17■□□□□ 0.82
CHTOP-201ENST00000368686 DDX58O95786 925 aaKnown RBP20.17■□□□□ 0.82
CHTOP-201ENST00000368686 TFCP2Q12800 502 aa20.17■□□□□ 0.82
CHTOP-201ENST00000368686 SPATA20Q8TB22 786 aa20.17■□□□□ 0.82
CHTOP-201ENST00000368686 CAGE1Q8TC20 777 aa20.17■□□□□ 0.82
CHTOP-201ENST00000368686 MAGEC3Q8TD91 643 aa20.17■□□□□ 0.82
CHTOP-201ENST00000368686 DBNDD2Q9BQY9 259 aa20.17■□□□□ 0.82
CHTOP-201ENST00000368686 TRIM6Q9C030 488 aaPredicted RBP20.17■□□□□ 0.82
CHTOP-201ENST00000368686 SERTAD1Q9UHV2 236 aa20.17■□□□□ 0.82
CHTOP-201ENST00000368686 NBPF20Q3BBV1 942 aa20.16■□□□□ 0.82
CHTOP-201ENST00000368686 EPN3Q9H201 632 aa20.16■□□□□ 0.82
CHTOP-201ENST00000368686 POLR2DO15514 142 aaKnown RBP20.16■□□□□ 0.82
CHTOP-201ENST00000368686 KCNQ3O43525 872 aa20.16■□□□□ 0.82
CHTOP-201ENST00000368686 CDKL5O76039 1030 aa20.16■□□□□ 0.82
CHTOP-201ENST00000368686 PAX7P23759 505 aa20.16■□□□□ 0.82
CHTOP-201ENST00000368686 SNCBQ16143 134 aa20.16■□□□□ 0.82
CHTOP-201ENST00000368686 NAA35Q5VZE5 725 aa20.16■□□□□ 0.82
CHTOP-201ENST00000368686 CCDC13Q8IYE1 715 aa20.16■□□□□ 0.82
CHTOP-201ENST00000368686 JAKMIP2Q96AA8 810 aa20.16■□□□□ 0.82
CHTOP-201ENST00000368686 SGSM3Q96HU1 749 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms