RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 SNW1Q13573 536 aaKnown RBP16.55■□□□□ 0.24
NIPAL3-203ENST00000358028 MYSM1Q5VVJ2 828 aa16.55■□□□□ 0.24
NIPAL3-203ENST00000358028 MFSD6Q6ZSS7 791 aa16.55■□□□□ 0.24
NIPAL3-203ENST00000358028 MTERF4Q7Z6M4 381 aaKnown RBP16.55■□□□□ 0.24
NIPAL3-203ENST00000358028 FSIP1Q8NA03 581 aa16.55■□□□□ 0.24
NIPAL3-203ENST00000358028 ENGASEQ8NFI3 743 aa16.55■□□□□ 0.24
NIPAL3-203ENST00000358028 KIAA1524Q8TCG1 905 aa16.55■□□□□ 0.24
NIPAL3-203ENST00000358028 STAG1Q8WVM7 1258 aa16.55■□□□□ 0.24
NIPAL3-203ENST00000358028 ZNF830Q96NB3 372 aaPredicted RBP16.55■□□□□ 0.24
NIPAL3-203ENST00000358028 ALG1Q9BT22 464 aa16.55■□□□□ 0.24
NIPAL3-203ENST00000358028 PDCL3Q9H2J4 239 aa16.55■□□□□ 0.24
NIPAL3-203ENST00000358028 POLR3EQ9NVU0 708 aa16.55■□□□□ 0.24
NIPAL3-203ENST00000358028 ZNRF3Q9ULT6 936 aa16.55■□□□□ 0.24
NIPAL3-203ENST00000358028 PCDHA7Q9UN72 937 aa16.55■□□□□ 0.24
NIPAL3-203ENST00000358028 IRS2Q9Y4H2 1338 aa16.55■□□□□ 0.24
NIPAL3-203ENST00000358028 COL1A1P02452 1464 aaPredicted RBP16.55■□□□□ 0.24
NIPAL3-203ENST00000358028 A0A1W2PQ27 194 aa16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 A0A1W2PQ64 194 aa16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 A0A1W2PQD8 194 aa16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 KIF28PB7ZC32 967 aa16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 IFIT3O14879 490 aaKnown RBP16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 ECE2O60344 883 aa16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 RXRAP19793 462 aa16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 CYP7A1P22680 504 aa16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 GYG1P46976 350 aa16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 STK38Q15208 465 aa16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 STX1AQ16623 288 aa16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 MICU3Q86XE3 530 aa16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 PLA2G4DQ86XP0 818 aa16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 LINC00301Q8NCQ3 95 aa16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 GJB4Q9NTQ9 266 aa16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 ZSWIM5Q9P217 1185 aa16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 IQSEC3Q9UPP2 1182 aaPredicted RBP16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 CLIC4Q9Y696 253 aa16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 NID2Q14112 1375 aa16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 KINO60870 393 aaKnown RBP16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 POLR3DP05423 398 aaPredicted RBP16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 ZNF75DP51815 510 aa16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 EIF6P56537 245 aaKnown RBP16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 DNTTIP2Q5QJE6 756 aaKnown RBP16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 ADALQ6DHV7 355 aa16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 DPY19L2Q6NUT2 758 aa16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 SARM1Q6SZW1 724 aa16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 MIGA1Q8NAN2 632 aa16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 MYRIPQ8NFW9 859 aa16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 KCNG4Q8TDN1 519 aa16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 MRPS27Q92552 414 aaKnown RBP16.54■□□□□ 0.24
NIPAL3-203ENST00000358028 CCDC69A6NI79 296 aa16.53■□□□□ 0.24
NIPAL3-203ENST00000358028 POTECB2RU33 542 aa16.53■□□□□ 0.24
NIPAL3-203ENST00000358028 RAD17O75943 681 aa16.53■□□□□ 0.24
NIPAL3-203ENST00000358028 CXCL9Q07325 125 aa16.53■□□□□ 0.24
NIPAL3-203ENST00000358028 NTRK3Q16288 839 aa16.53■□□□□ 0.24
NIPAL3-203ENST00000358028 DNAJC25Q9H1X3 360 aa16.53■□□□□ 0.24
NIPAL3-203ENST00000358028 KCNF1Q9H3M0 494 aa16.53■□□□□ 0.24
NIPAL3-203ENST00000358028 KCNQ5Q9NR82 932 aa16.53■□□□□ 0.24
NIPAL3-203ENST00000358028 SLC12A7Q9Y666 1083 aa16.53■□□□□ 0.24
NIPAL3-203ENST00000358028 VEGFAP15692 232 aaPredicted RBP16.52■□□□□ 0.24
NIPAL3-203ENST00000358028 FSTL1Q12841 308 aa16.52■□□□□ 0.24
NIPAL3-203ENST00000358028 SF3A1Q15459 793 aaKnown RBP16.52■□□□□ 0.24
NIPAL3-203ENST00000358028 CAVIN4Q5BKX8 364 aa16.52■□□□□ 0.24
NIPAL3-203ENST00000358028 KRT40Q6A162 431 aa16.52■□□□□ 0.24
NIPAL3-203ENST00000358028 SYNE3Q6ZMZ3 975 aa16.52■□□□□ 0.24
NIPAL3-203ENST00000358028 ADGRA1Q86SQ6 560 aa16.52■□□□□ 0.24
NIPAL3-203ENST00000358028 CCDC144CPQ8IYA2 1237 aa16.52■□□□□ 0.24
NIPAL3-203ENST00000358028 AIFM3Q96NN9 605 aa16.52■□□□□ 0.24
NIPAL3-203ENST00000358028 FAM217BQ9NTX9 383 aaPredicted RBP16.52■□□□□ 0.24
NIPAL3-203ENST00000358028 RAI14Q9P0K7 980 aa16.52■□□□□ 0.24
NIPAL3-203ENST00000358028 GJA3Q9Y6H8 435 aa16.52■□□□□ 0.24
NIPAL3-203ENST00000358028 STK36Q9NRP7 1315 aa16.52■□□□□ 0.24
NIPAL3-203ENST00000358028 MAGEB6P1A0A0J9YX57 407 aa16.51■□□□□ 0.23
NIPAL3-203ENST00000358028 SPTLC2O15270 562 aa16.51■□□□□ 0.23
NIPAL3-203ENST00000358028 RANBP6O60518 1105 aaKnown RBP16.51■□□□□ 0.23
NIPAL3-203ENST00000358028 ANO1Q5XXA6 986 aa16.51■□□□□ 0.23
NIPAL3-203ENST00000358028 FMR1NBQ8N0W7 255 aaPredicted RBP16.51■□□□□ 0.23
NIPAL3-203ENST00000358028 GPC2Q8N158 579 aa16.51■□□□□ 0.23
NIPAL3-203ENST00000358028 PHKBQ93100 1093 aa16.51■□□□□ 0.23
NIPAL3-203ENST00000358028 MTA3Q9BTC8 594 aa16.51■□□□□ 0.23
NIPAL3-203ENST00000358028 MYL10Q9BUA6 226 aa16.51■□□□□ 0.23
NIPAL3-203ENST00000358028 RNF41Q9H4P4 317 aaPredicted RBP16.51■□□□□ 0.23
NIPAL3-203ENST00000358028 ANO10Q9NW15 660 aa16.51■□□□□ 0.23
NIPAL3-203ENST00000358028 ABCF2Q9UG63 623 aa16.51■□□□□ 0.23
NIPAL3-203ENST00000358028 G3V3G9 751 aa16.51■□□□□ 0.23
NIPAL3-203ENST00000358028 GOLGA6L19H0YKK7 550 aa16.51■□□□□ 0.23
NIPAL3-203ENST00000358028 GTF2F1P35269 517 aaKnown RBP eCLIP16.51■□□□□ 0.23
NIPAL3-203ENST00000358028 PPARAQ07869 468 aa16.51■□□□□ 0.23
NIPAL3-203ENST00000358028 SART3Q15020 963 aaKnown RBP16.51■□□□□ 0.23
NIPAL3-203ENST00000358028 IQCB1Q15051 598 aa16.51■□□□□ 0.23
NIPAL3-203ENST00000358028 RRP12Q5JTH9 1297 aaKnown RBP16.51■□□□□ 0.23
NIPAL3-203ENST00000358028 DCAF8Q5TAQ9 597 aa16.51■□□□□ 0.23
NIPAL3-203ENST00000358028 SPC24Q8NBT2 197 aa16.51■□□□□ 0.23
NIPAL3-203ENST00000358028 TRIM5Q9C035 493 aa16.51■□□□□ 0.23
NIPAL3-203ENST00000358028 TOMM22Q9NS69 142 aa16.51■□□□□ 0.23
NIPAL3-203ENST00000358028 APLP1P51693 650 aa16.5■□□□□ 0.23
NIPAL3-203ENST00000358028 SSRP1Q08945 709 aaKnown RBP16.5■□□□□ 0.23
NIPAL3-203ENST00000358028 WTAPQ15007 396 aa16.5■□□□□ 0.23
NIPAL3-203ENST00000358028 GLIPR1L2Q4G1C9 344 aa16.5■□□□□ 0.23
NIPAL3-203ENST00000358028 CIAPIN1Q6FI81 312 aa16.5■□□□□ 0.23
NIPAL3-203ENST00000358028 VPS37DQ86XT2 251 aa16.5■□□□□ 0.23
NIPAL3-203ENST00000358028 FAM84BQ96KN1 310 aaPredicted RBP16.5■□□□□ 0.23
NIPAL3-203ENST00000358028 FMNL1O95466 1100 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms