RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 SPATA5Q8NB90 893 aa20.21■□□□□ 0.83
RTN4-204ENST00000357732 SERTAD1Q9UHV2 236 aa20.21■□□□□ 0.83
RTN4-204ENST00000357732 COL22A1Q8NFW1 1626 aaPredicted RBP20.21■□□□□ 0.83
RTN4-204ENST00000357732 XIRP1Q702N8 1843 aaKnown RBP20.2■□□□□ 0.82
RTN4-204ENST00000357732 IRS4O14654 1257 aaPredicted RBP20.2■□□□□ 0.82
RTN4-204ENST00000357732 FMR1Q06787 632 aaKnown RBP eCLIP20.2■□□□□ 0.825e-11■□□□□ 8.4
RTN4-204ENST00000357732 WTAPQ15007 396 aa20.2■□□□□ 0.82
RTN4-204ENST00000357732 CRACR2BQ8N4Y2 399 aaPredicted RBP20.2■□□□□ 0.82
RTN4-204ENST00000357732 PDILTQ8N807 584 aa20.2■□□□□ 0.82
RTN4-204ENST00000357732 GOLGA1Q92805 767 aa20.2■□□□□ 0.82
RTN4-204ENST00000357732 AKR1B15C9JRZ8 316 aaPredicted RBP20.2■□□□□ 0.82
RTN4-204ENST00000357732 CC2D1AQ6P1N0 951 aaPredicted RBP20.2■□□□□ 0.82
RTN4-204ENST00000357732 AATFQ9NY61 560 aaKnown RBP eCLIP20.2■□□□□ 0.82
RTN4-204ENST00000357732 TAOK2Q9UL54 1235 aa20.2■□□□□ 0.82
RTN4-204ENST00000357732 BCORQ6W2J9 1755 aa20.19■□□□□ 0.82
RTN4-204ENST00000357732 FOXN1O15353 648 aa20.19■□□□□ 0.82
RTN4-204ENST00000357732 SLC5A1P13866 664 aa20.19■□□□□ 0.82
RTN4-204ENST00000357732 XBP1P17861 261 aa20.19■□□□□ 0.82
RTN4-204ENST00000357732 MYL10Q9BUA6 226 aa20.19■□□□□ 0.82
RTN4-204ENST00000357732 ARFGAP3Q9NP61 516 aa20.19■□□□□ 0.82
RTN4-204ENST00000357732 SLAIN2Q9P270 581 aa20.19■□□□□ 0.82
RTN4-204ENST00000357732 MBD4O95243 580 aa20.19■□□□□ 0.82
RTN4-204ENST00000357732 SPATA1Q5VX52 437 aa20.19■□□□□ 0.82
RTN4-204ENST00000357732 CCDC51Q96ER9 411 aa20.19■□□□□ 0.82
RTN4-204ENST00000357732 WDR24Q96S15 920 aa20.19■□□□□ 0.82
RTN4-204ENST00000357732 RNF26Q9BY78 433 aaPredicted RBP20.19■□□□□ 0.82
RTN4-204ENST00000357732 GSG1L2A8MUP6 293 aa20.18■□□□□ 0.82
RTN4-204ENST00000357732 POTEB2H3BUK9 544 aa20.18■□□□□ 0.82
RTN4-204ENST00000357732 TOGARAM2Q6ZUX3 1019 aa20.18■□□□□ 0.82
RTN4-204ENST00000357732 RTL9Q8NET4 1388 aa20.18■□□□□ 0.82
RTN4-204ENST00000357732 CCDC151A5D8V7 595 aa20.17■□□□□ 0.82
RTN4-204ENST00000357732 ERVV-1B6SEH8 477 aa20.17■□□□□ 0.82
RTN4-204ENST00000357732 ST7Q9NRC1 585 aa20.17■□□□□ 0.82
RTN4-204ENST00000357732 TRMT112Q9UI30 125 aaKnown RBP20.17■□□□□ 0.82
RTN4-204ENST00000357732 TBC1D8O95759 1140 aa20.17■□□□□ 0.82
RTN4-204ENST00000357732 PRR29P0C7W0 189 aa20.17■□□□□ 0.82
RTN4-204ENST00000357732 BRD3Q15059 726 aa20.17■□□□□ 0.82
RTN4-204ENST00000357732 MSL3Q8N5Y2 521 aaKnown RBP20.17■□□□□ 0.82
RTN4-204ENST00000357732 FERMT2Q96AC1 680 aa20.17■□□□□ 0.82
RTN4-204ENST00000357732 SLC4A9Q96Q91 983 aa20.17■□□□□ 0.82
RTN4-204ENST00000357732 GSDMAQ96QA5 445 aa20.17■□□□□ 0.82
RTN4-204ENST00000357732 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.17■□□□□ 0.82
RTN4-204ENST00000357732 GUCY1A2P33402 732 aa20.16■□□□□ 0.82
RTN4-204ENST00000357732 TXLNAP40222 546 aa20.16■□□□□ 0.82
RTN4-204ENST00000357732 ADKP55263 362 aaKnown RBP20.16■□□□□ 0.82
RTN4-204ENST00000357732 CTDSPL2Q05D32 466 aa20.16■□□□□ 0.82
RTN4-204ENST00000357732 GOLGA8FQ08AF8 430 aa20.16■□□□□ 0.82
RTN4-204ENST00000357732 GOLGA8DPQ0D2H9 430 aa20.16■□□□□ 0.82
RTN4-204ENST00000357732 MAGEB6Q8N7X4 407 aa20.16■□□□□ 0.82
RTN4-204ENST00000357732 FANCBQ8NB91 859 aa20.16■□□□□ 0.82
RTN4-204ENST00000357732 PCDHB6Q9Y5E3 794 aa20.16■□□□□ 0.82
RTN4-204ENST00000357732 PLCH1Q4KWH8 1693 aa20.16■□□□□ 0.82
RTN4-204ENST00000357732 ITIH6Q6UXX5 1313 aa20.16■□□□□ 0.82
RTN4-204ENST00000357732 ABCA3Q99758 1704 aa20.16■□□□□ 0.82
RTN4-204ENST00000357732 FECHP22830 423 aa20.16■□□□□ 0.82
RTN4-204ENST00000357732 GPS2Q13227 327 aa20.16■□□□□ 0.82
RTN4-204ENST00000357732 PPFIBP1Q86W92 1011 aa20.16■□□□□ 0.82
RTN4-204ENST00000357732 INCENPQ9NQS7 918 aa20.16■□□□□ 0.82
RTN4-204ENST00000357732 PBX1P40424 430 aa20.15■□□□□ 0.82
RTN4-204ENST00000357732 FILIP1LQ4L180 1135 aa20.15■□□□□ 0.82
RTN4-204ENST00000357732 SPECC1Q5M775 1068 aa20.15■□□□□ 0.82
RTN4-204ENST00000357732 SH3RF1Q7Z6J0 888 aa20.15■□□□□ 0.82
RTN4-204ENST00000357732 TXLNBQ8N3L3 684 aa20.15■□□□□ 0.82
RTN4-204ENST00000357732 CEP112Q8N8E3 955 aa20.15■□□□□ 0.82
RTN4-204ENST00000357732 HELBQ8NG08 1087 aaPredicted RBP20.15■□□□□ 0.82
RTN4-204ENST00000357732 HNRNPLLQ8WVV9 542 aaKnown RBP20.15■□□□□ 0.82
RTN4-204ENST00000357732 PYM1Q9BRP8 204 aaKnown RBP20.15■□□□□ 0.82
RTN4-204ENST00000357732 KCNJ14Q9UNX9 436 aa20.15■□□□□ 0.82
RTN4-204ENST00000357732 ZBTB1Q9Y2K1 713 aa20.15■□□□□ 0.82
RTN4-204ENST00000357732 TRIM75PA6NK02 468 aa20.15■□□□□ 0.82
RTN4-204ENST00000357732 CYP19A1P11511 503 aaPredicted RBP20.15■□□□□ 0.82
RTN4-204ENST00000357732 TDO2P48775 406 aa20.15■□□□□ 0.82
RTN4-204ENST00000357732 CDKAL1Q5VV42 579 aa20.15■□□□□ 0.82
RTN4-204ENST00000357732 APTXQ7Z2E3 356 aaKnown RBP20.15■□□□□ 0.82
RTN4-204ENST00000357732 CNGA4Q8IV77 575 aa20.15■□□□□ 0.82
RTN4-204ENST00000357732 SAMSN1Q9NSI8 373 aaKnown RBP20.15■□□□□ 0.82
RTN4-204ENST00000357732 GRIN1Q05586 938 aa20.14■□□□□ 0.82
RTN4-204ENST00000357732 ZNF654Q8IZM8 581 aa20.14■□□□□ 0.82
RTN4-204ENST00000357732 CCDC12Q8WUD4 166 aaPredicted RBP20.14■□□□□ 0.82
RTN4-204ENST00000357732 MED15Q96RN5 788 aa20.14■□□□□ 0.82
RTN4-204ENST00000357732 CSRNP2Q9H175 543 aa20.14■□□□□ 0.82
RTN4-204ENST00000357732 SYNRGQ9UMZ2 1314 aa20.14■□□□□ 0.81
RTN4-204ENST00000357732 NUP98P52948 1817 aa20.14■□□□□ 0.81
RTN4-204ENST00000357732 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.14■□□□□ 0.81
RTN4-204ENST00000357732 KIF5CO60282 957 aa20.14■□□□□ 0.81
RTN4-204ENST00000357732 CUL4BQ13620 913 aa20.14■□□□□ 0.81
RTN4-204ENST00000357732 RASGRF1Q13972 1273 aa20.14■□□□□ 0.81
RTN4-204ENST00000357732 SRGAP1Q7Z6B7 1085 aa20.14■□□□□ 0.81
RTN4-204ENST00000357732 FAM177A1Q8N128 213 aaPredicted RBP20.14■□□□□ 0.81
RTN4-204ENST00000357732 ARMT1Q9H993 441 aa20.14■□□□□ 0.81
RTN4-204ENST00000357732 ADD3Q9UEY8 706 aaKnown RBP20.14■□□□□ 0.81
RTN4-204ENST00000357732 ANAPC4Q9UJX5 808 aa20.14■□□□□ 0.81
RTN4-204ENST00000357732 ADGRG1Q9Y653 693 aa20.14■□□□□ 0.81
RTN4-204ENST00000357732 BCL9LQ86UU0 1499 aa20.14■□□□□ 0.81
RTN4-204ENST00000357732 TUBBP07437 444 aa20.13■□□□□ 0.81
RTN4-204ENST00000357732 RASGRP2Q7LDG7 609 aa20.13■□□□□ 0.81
RTN4-204ENST00000357732 TRMT44Q8IYL2 757 aaKnown RBP20.13■□□□□ 0.81
RTN4-204ENST00000357732 DHX58Q96C10 678 aa20.13■□□□□ 0.81
RTN4-204ENST00000357732 UBAC1Q9BSL1 405 aa20.13■□□□□ 0.81
RTN4-204ENST00000357732 PARD6BQ9BYG5 372 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms