RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 PITPNM2Q9BZ72 1349 aa24.29■■□□□ 1.48
CLDND1-201ENST00000341181 NBPF12Q5TAG4 269 aaPredicted RBP24.29■■□□□ 1.48
CLDND1-201ENST00000341181 BRF1Q92994 677 aa24.29■■□□□ 1.48
CLDND1-201ENST00000341181 SSC5DA1L4H1 1573 aa24.28■■□□□ 1.48
CLDND1-201ENST00000341181 TSPY2A6NKD2 308 aa24.28■■□□□ 1.48
CLDND1-201ENST00000341181 TFAP4Q01664 338 aa24.28■■□□□ 1.48
CLDND1-201ENST00000341181 RRP1BQ14684 758 aaKnown RBP24.28■■□□□ 1.48
CLDND1-201ENST00000341181 SNX21Q969T3 373 aa24.28■■□□□ 1.48
CLDND1-201ENST00000341181 SWAP70Q9UH65 585 aa24.27■■□□□ 1.48
CLDND1-201ENST00000341181 LARGE1O95461 756 aa24.27■■□□□ 1.48
CLDND1-201ENST00000341181 AKR1B1P15121 316 aa24.27■■□□□ 1.48
CLDND1-201ENST00000341181 AGXT2Q9BYV1 514 aa24.27■■□□□ 1.48
CLDND1-201ENST00000341181 IL17RBQ9NRM6 502 aa24.27■■□□□ 1.48
CLDND1-201ENST00000341181 FZD1Q9UP38 647 aa24.27■■□□□ 1.48
CLDND1-201ENST00000341181 FOXP4Q8IVH2 680 aaPredicted RBP24.26■■□□□ 1.47
CLDND1-201ENST00000341181 ZNF444Q8N0Y2 327 aaPredicted RBP24.26■■□□□ 1.47
CLDND1-201ENST00000341181 IGDCC4Q8TDY8 1250 aa24.26■■□□□ 1.47
CLDND1-201ENST00000341181 DCPSQ96C86 337 aaKnown RBP24.26■■□□□ 1.47
CLDND1-201ENST00000341181 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.26■■□□□ 1.47
CLDND1-201ENST00000341181 ZNF287Q9HBT7 754 aa24.26■■□□□ 1.47
CLDND1-201ENST00000341181 TPCN1Q9ULQ1 816 aa24.26■■□□□ 1.47
CLDND1-201ENST00000341181 TNKSO95271 1327 aa24.26■■□□□ 1.47
CLDND1-201ENST00000341181 SH2B2O14492 632 aaPredicted RBP24.26■■□□□ 1.47
CLDND1-201ENST00000341181 TSPY3P0CV98 308 aa24.26■■□□□ 1.47
CLDND1-201ENST00000341181 TSPY8P0CW00 308 aa24.26■■□□□ 1.47
CLDND1-201ENST00000341181 FGD1P98174 961 aa24.26■■□□□ 1.47
CLDND1-201ENST00000341181 TATDN1Q6P1N9 297 aa24.26■■□□□ 1.47
CLDND1-201ENST00000341181 KRT26Q7Z3Y9 468 aa24.26■■□□□ 1.47
CLDND1-201ENST00000341181 CLEC10AQ8IUN9 316 aa24.26■■□□□ 1.47
CLDND1-201ENST00000341181 TRIM34Q9BYJ4 488 aa24.26■■□□□ 1.47
CLDND1-201ENST00000341181 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.26■■□□□ 1.471e-6■■■□□ 18.4
CLDND1-201ENST00000341181 HERC5Q9UII4 1024 aaKnown RBP24.26■■□□□ 1.47
CLDND1-201ENST00000341181 WDR19Q8NEZ3 1342 aa24.26■■□□□ 1.47
CLDND1-201ENST00000341181 JAG1P78504 1218 aa24.25■■□□□ 1.47
CLDND1-201ENST00000341181 APOBRQ0VD83 1088 aa24.25■■□□□ 1.47
CLDND1-201ENST00000341181 PNMA8AQ86V59 439 aaPredicted RBP24.25■■□□□ 1.47
CLDND1-201ENST00000341181 ENAHQ8N8S7 591 aaPredicted RBP24.25■■□□□ 1.47
CLDND1-201ENST00000341181 LY9Q9HBG7 655 aa24.25■■□□□ 1.47
CLDND1-201ENST00000341181 IFIT3O14879 490 aaKnown RBP24.25■■□□□ 1.47
CLDND1-201ENST00000341181 GDF11O95390 407 aa24.25■■□□□ 1.47
CLDND1-201ENST00000341181 VEGFAP15692 232 aaPredicted RBP24.25■■□□□ 1.47
CLDND1-201ENST00000341181 TMEM67Q5HYA8 995 aa24.25■■□□□ 1.47
CLDND1-201ENST00000341181 HSCBQ8IWL3 235 aa24.25■■□□□ 1.47
CLDND1-201ENST00000341181 SULF1Q8IWU6 871 aa24.25■■□□□ 1.47
CLDND1-201ENST00000341181 ZC3H15Q8WU90 426 aaKnown RBP24.25■■□□□ 1.47
CLDND1-201ENST00000341181 UBAC1Q9BSL1 405 aa24.25■■□□□ 1.47
CLDND1-201ENST00000341181 ALDH8A1Q9H2A2 487 aaPredicted RBP24.25■■□□□ 1.47
CLDND1-201ENST00000341181 ANGEL1Q9UNK9 670 aaKnown RBP24.25■■□□□ 1.47
CLDND1-201ENST00000341181 ZSCAN10Q96SZ4 725 aaPredicted RBP24.24■■□□□ 1.47
CLDND1-201ENST00000341181 SEC23AQ15436 765 aa24.23■■□□□ 1.47
CLDND1-201ENST00000341181 GLIS2Q9BZE0 524 aaPredicted RBP24.23■■□□□ 1.47
CLDND1-201ENST00000341181 K7ELQ4 463 aaPredicted RBP24.23■■□□□ 1.47
CLDND1-201ENST00000341181 CERKLQ49MI3 558 aaPredicted RBP24.23■■□□□ 1.47
CLDND1-201ENST00000341181 IQCA1Q86XH1 822 aa24.23■■□□□ 1.47
CLDND1-201ENST00000341181 FBXL16Q8N461 479 aa24.23■■□□□ 1.47
CLDND1-201ENST00000341181 TMEM87BQ96K49 555 aa24.23■■□□□ 1.47
CLDND1-201ENST00000341181 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.23■■□□□ 1.47
CLDND1-201ENST00000341181 GREB1LQ9C091 1923 aaPredicted RBP24.23■■□□□ 1.47
CLDND1-201ENST00000341181 PLIN4Q96Q06 1357 aa24.23■■□□□ 1.47
CLDND1-201ENST00000341181 MAP3K10Q02779 954 aa24.22■■□□□ 1.47
CLDND1-201ENST00000341181 RCSD1Q6JBY9 416 aa24.22■■□□□ 1.47
CLDND1-201ENST00000341181 RAB11FIP4Q86YS3 637 aa24.22■■□□□ 1.47
CLDND1-201ENST00000341181 TMX3Q96JJ7 454 aa24.22■■□□□ 1.47
CLDND1-201ENST00000341181 BRPF3Q9ULD4 1205 aa24.22■■□□□ 1.47
CLDND1-201ENST00000341181 MPHOSPH10O00566 681 aaKnown RBP24.22■■□□□ 1.47
CLDND1-201ENST00000341181 ME3Q16798 604 aa24.22■■□□□ 1.47
CLDND1-201ENST00000341181 MAP1SQ66K74 1059 aaPredicted RBP24.22■■□□□ 1.47
CLDND1-201ENST00000341181 USP48Q86UV5 1035 aa24.22■■□□□ 1.47
CLDND1-201ENST00000341181 NEDD1Q8NHV4 660 aa24.22■■□□□ 1.47
CLDND1-201ENST00000341181 CEP95Q96GE4 821 aa24.22■■□□□ 1.47
CLDND1-201ENST00000341181 PPP2R3BQ9Y5P8 575 aa24.22■■□□□ 1.47
CLDND1-201ENST00000341181 TBC1D12O60347 775 aa24.21■■□□□ 1.47
CLDND1-201ENST00000341181 LIMCH1Q9UPQ0 1083 aa24.21■■□□□ 1.47
CLDND1-201ENST00000341181 CLEC11AQ9Y240 323 aa24.21■■□□□ 1.47
CLDND1-201ENST00000341181 SART3Q15020 963 aaKnown RBP24.2■■□□□ 1.47
CLDND1-201ENST00000341181 MYL10Q9BUA6 226 aa24.2■■□□□ 1.47
CLDND1-201ENST00000341181 PHF20L1A8MW92 1017 aa24.2■■□□□ 1.46
CLDND1-201ENST00000341181 DTNBO60941 627 aa24.2■■□□□ 1.46
CLDND1-201ENST00000341181 STK3Q13188 491 aa24.2■■□□□ 1.46
CLDND1-201ENST00000341181 WTAPQ15007 396 aa24.2■■□□□ 1.46
CLDND1-201ENST00000341181 ANKRD1Q15327 319 aa24.2■■□□□ 1.46
CLDND1-201ENST00000341181 ST3GAL1Q11201 340 aa24.19■■□□□ 1.46
CLDND1-201ENST00000341181 STX8Q9UNK0 236 aa24.19■■□□□ 1.46
CLDND1-201ENST00000341181 IGKV6D-41A0A0C4DH26 115 aa24.19■■□□□ 1.46
CLDND1-201ENST00000341181 KLF18A0A0U1RQI7 1052 aa24.19■■□□□ 1.46
CLDND1-201ENST00000341181 GH2P01242 217 aa24.19■■□□□ 1.46
CLDND1-201ENST00000341181 RXRAP19793 462 aa24.19■■□□□ 1.46
CLDND1-201ENST00000341181 GUCY1A2P33402 732 aa24.19■■□□□ 1.46
CLDND1-201ENST00000341181 LIFRP42702 1097 aa24.19■■□□□ 1.46
CLDND1-201ENST00000341181 MCM2P49736 904 aa24.19■■□□□ 1.46
CLDND1-201ENST00000341181 FMR1Q06787 632 aaKnown RBP eCLIP24.19■■□□□ 1.46
CLDND1-201ENST00000341181 SGMS1Q86VZ5 419 aa24.19■■□□□ 1.46
CLDND1-201ENST00000341181 NAP1L2Q9ULW6 460 aaPredicted RBP24.19■■□□□ 1.46
CLDND1-201ENST00000341181 ERICH2A1L162 156 aa24.18■■□□□ 1.46
CLDND1-201ENST00000341181 PRKG1Q13976 671 aa24.18■■□□□ 1.46
CLDND1-201ENST00000341181 ABCB5Q2M3G0 1257 aa24.18■■□□□ 1.46
CLDND1-201ENST00000341181 NECAB1Q8N987 351 aa24.18■■□□□ 1.46
CLDND1-201ENST00000341181 FOXD4L1Q9NU39 408 aa24.18■■□□□ 1.46
CLDND1-201ENST00000341181 TCP11L1Q9NUJ3 509 aa24.18■■□□□ 1.46
CLDND1-201ENST00000341181 SEPT2Q15019 361 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms