RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 VAT1LQ9HCJ6 419 aa16.02■□□□□ 0.16
PCDH8-201ENST00000338862 ZNHIT6Q9NWK9 470 aaKnown RBP16.02■□□□□ 0.16
PCDH8-201ENST00000338862 HDAC6Q9UBN7 1215 aa16.02■□□□□ 0.16
PCDH8-201ENST00000338862 TRIM10Q9UDY6 481 aa16.02■□□□□ 0.16
PCDH8-201ENST00000338862 TBC1D8O95759 1140 aa16.02■□□□□ 0.15
PCDH8-201ENST00000338862 BCAMP50895 628 aa16.02■□□□□ 0.15
PCDH8-201ENST00000338862 SYMPKQ92797 1274 aaKnown RBP16.02■□□□□ 0.15
PCDH8-201ENST00000338862 SH2B2O14492 632 aaPredicted RBP16.02■□□□□ 0.15
PCDH8-201ENST00000338862 CEP112Q8N8E3 955 aa16.02■□□□□ 0.15
PCDH8-201ENST00000338862 UBN2Q6ZU65 1347 aa16.01■□□□□ 0.15
PCDH8-201ENST00000338862 CCDC196A0A1B0GTZ2 297 aa16.01■□□□□ 0.15
PCDH8-201ENST00000338862 SSBP05455 408 aaKnown RBP eCLIP16.01■□□□□ 0.15
PCDH8-201ENST00000338862 RILPL1Q5EBL4 403 aa16.01■□□□□ 0.15
PCDH8-201ENST00000338862 IFIT1BQ5T764 474 aaKnown RBP16.01■□□□□ 0.15
PCDH8-201ENST00000338862 CCDC70Q6NSX1 233 aa16.01■□□□□ 0.15
PCDH8-201ENST00000338862 CCDC24Q8N4L8 307 aa16.01■□□□□ 0.15
PCDH8-201ENST00000338862 TC2NQ8N9U0 490 aa16.01■□□□□ 0.15
PCDH8-201ENST00000338862 RIN2Q8WYP3 895 aaPredicted RBP16.01■□□□□ 0.15
PCDH8-201ENST00000338862 ASAP1Q9ULH1 1129 aa16.01■□□□□ 0.15
PCDH8-201ENST00000338862 ITSN1Q15811 1721 aa16.01■□□□□ 0.15
PCDH8-201ENST00000338862 STARD3NLO95772 234 aa16.01■□□□□ 0.15
PCDH8-201ENST00000338862 CCDC181Q5TID7 509 aa16.01■□□□□ 0.15
PCDH8-201ENST00000338862 RAD9BQ6WBX8 426 aa16.01■□□□□ 0.15
PCDH8-201ENST00000338862 NAPGQ99747 312 aaPredicted RBP16.01■□□□□ 0.15
PCDH8-201ENST00000338862 TTF1Q15361 905 aaPredicted RBP16.01■□□□□ 0.15
PCDH8-201ENST00000338862 RABL6Q3YEC7 729 aaPredicted RBP16.01■□□□□ 0.15
PCDH8-201ENST00000338862 RESP18Q5W5W9 173 aa16.01■□□□□ 0.15
PCDH8-201ENST00000338862 PTPROQ16827 1216 aa16■□□□□ 0.15
PCDH8-201ENST00000338862 FAM47AQ5JRC9 791 aa16■□□□□ 0.15
PCDH8-201ENST00000338862 CATIPQ7Z7H3 387 aa16■□□□□ 0.15
PCDH8-201ENST00000338862 MICALL1Q8N3F8 863 aa16■□□□□ 0.15
PCDH8-201ENST00000338862 GNL3LQ9NVN8 582 aaKnown RBP16■□□□□ 0.15
PCDH8-201ENST00000338862 BMP6P22004 513 aa16■□□□□ 0.15
PCDH8-201ENST00000338862 MTIF2P46199 727 aaKnown RBP16■□□□□ 0.15
PCDH8-201ENST00000338862 HLFQ16534 295 aa16■□□□□ 0.15
PCDH8-201ENST00000338862 SRGAP1Q7Z6B7 1085 aa16■□□□□ 0.15
PCDH8-201ENST00000338862 ANKRD13CQ8N6S4 541 aa16■□□□□ 0.15
PCDH8-201ENST00000338862 RASGRP4Q8TDF6 673 aa16■□□□□ 0.15
PCDH8-201ENST00000338862 RABGGTAQ92696 567 aa16■□□□□ 0.15
PCDH8-201ENST00000338862 ABL1P00519 1130 aa15.99■□□□□ 0.15
PCDH8-201ENST00000338862 SLC5A1P13866 664 aa15.99■□□□□ 0.15
PCDH8-201ENST00000338862 CCDC178Q5BJE1 867 aa15.99■□□□□ 0.15
PCDH8-201ENST00000338862 ZHX3Q9H4I2 956 aa15.99■□□□□ 0.15
PCDH8-201ENST00000338862 SMIM22K7EJ46 135 aa15.99■□□□□ 0.15
PCDH8-201ENST00000338862 TCIRG1Q13488 830 aa15.99■□□□□ 0.15
PCDH8-201ENST00000338862 AKNAD1Q5T1N1 836 aa15.99■□□□□ 0.15
PCDH8-201ENST00000338862 ZNF654Q8IZM8 581 aa15.99■□□□□ 0.15
PCDH8-201ENST00000338862 TMEM87BQ96K49 555 aa15.99■□□□□ 0.15
PCDH8-201ENST00000338862 LCMT1Q9UIC8 334 aa15.99■□□□□ 0.15
PCDH8-201ENST00000338862 H3BQF6 201 aa15.99■□□□□ 0.15
PCDH8-201ENST00000338862 MYO1CO00159 1063 aa15.99■□□□□ 0.15
PCDH8-201ENST00000338862 PPP6R2O75170 966 aa15.99■□□□□ 0.15
PCDH8-201ENST00000338862 TUBB4AP04350 444 aa15.99■□□□□ 0.15
PCDH8-201ENST00000338862 ARID5AQ03989 594 aa15.99■□□□□ 0.15
PCDH8-201ENST00000338862 CCDC96Q2M329 555 aa15.99■□□□□ 0.15
PCDH8-201ENST00000338862 CTCFLQ8NI51 663 aaPredicted RBP15.99■□□□□ 0.15
PCDH8-201ENST00000338862 MRFAP1Q9Y605 127 aa15.99■□□□□ 0.15
PCDH8-201ENST00000338862 PATL2C9JE40 543 aaKnown RBP15.98■□□□□ 0.15
PCDH8-201ENST00000338862 ADD2P35612 726 aa15.98■□□□□ 0.15
PCDH8-201ENST00000338862 IQCA1Q86XH1 822 aa15.98■□□□□ 0.15
PCDH8-201ENST00000338862 TSPYL1Q9H0U9 437 aa15.98■□□□□ 0.15
PCDH8-201ENST00000338862 CDC23Q9UJX2 597 aa15.98■□□□□ 0.15
PCDH8-201ENST00000338862 UTYO14607 1347 aa15.98■□□□□ 0.15
PCDH8-201ENST00000338862 STAT6P42226 847 aa15.98■□□□□ 0.15
PCDH8-201ENST00000338862 VSNL1P62760 191 aa15.98■□□□□ 0.15
PCDH8-201ENST00000338862 CYP27A1Q02318 531 aa15.98■□□□□ 0.15
PCDH8-201ENST00000338862 KANK3Q6NY19 840 aa15.98■□□□□ 0.15
PCDH8-201ENST00000338862 FANCBQ8NB91 859 aa15.98■□□□□ 0.15
PCDH8-201ENST00000338862 KRT23Q9C075 422 aa15.98■□□□□ 0.15
PCDH8-201ENST00000338862 INTS13Q9NVM9 706 aa15.98■□□□□ 0.15
PCDH8-201ENST00000338862 ZEB2O60315 1214 aa15.98■□□□□ 0.15
PCDH8-201ENST00000338862 IDEP14735 1019 aa15.98■□□□□ 0.15
PCDH8-201ENST00000338862 LCORLQ8N3X6 602 aa15.98■□□□□ 0.15
PCDH8-201ENST00000338862 IPO4Q8TEX9 1081 aaKnown RBP15.98■□□□□ 0.15
PCDH8-201ENST00000338862 FAM204AQ9H8W3 233 aa15.98■□□□□ 0.15
PCDH8-201ENST00000338862 SEC31BQ9NQW1 1179 aa15.98■□□□□ 0.15
PCDH8-201ENST00000338862 KRT2P35908 639 aa15.97■□□□□ 0.15
PCDH8-201ENST00000338862 UBA7P41226 1012 aa15.97■□□□□ 0.15
PCDH8-201ENST00000338862 FXR1P51114 621 aaKnown RBP eCLIP15.97■□□□□ 0.15
PCDH8-201ENST00000338862 PTGDRQ13258 359 aa15.97■□□□□ 0.15
PCDH8-201ENST00000338862 SPATA5Q8NB90 893 aa15.97■□□□□ 0.15
PCDH8-201ENST00000338862 PNKPQ96T60 521 aa15.97■□□□□ 0.15
PCDH8-201ENST00000338862 RRP15Q9Y3B9 282 aaKnown RBP15.97■□□□□ 0.15
PCDH8-201ENST00000338862 MYO1BO43795 1136 aa15.97■□□□□ 0.15
PCDH8-201ENST00000338862 DEXIO95424 95 aa15.97■□□□□ 0.15
PCDH8-201ENST00000338862 CNGA4Q8IV77 575 aa15.97■□□□□ 0.15
PCDH8-201ENST00000338862 NELFBQ8WX92 580 aa15.97■□□□□ 0.15
PCDH8-201ENST00000338862 LUC7L2Q9Y383 392 aaKnown RBP15.97■□□□□ 0.15
PCDH8-201ENST00000338862 TRIM49BA6NDI0 452 aa15.97■□□□□ 0.15
PCDH8-201ENST00000338862 MMP1P03956 469 aa15.97■□□□□ 0.15
PCDH8-201ENST00000338862 CXCR5P32302 372 aa15.97■□□□□ 0.15
PCDH8-201ENST00000338862 PLCD1P51178 756 aa15.97■□□□□ 0.15
PCDH8-201ENST00000338862 MAP3K9P80192 1104 aa15.97■□□□□ 0.15
PCDH8-201ENST00000338862 FOXR1Q6PIV2 292 aa15.97■□□□□ 0.15
PCDH8-201ENST00000338862 GDAQ9Y2T3 454 aa15.97■□□□□ 0.15
PCDH8-201ENST00000338862 ADGRG1Q9Y653 693 aa15.97■□□□□ 0.15
PCDH8-201ENST00000338862 FANCGO15287 622 aa15.96■□□□□ 0.15
PCDH8-201ENST00000338862 CCDC93Q567U6 631 aa15.96■□□□□ 0.15
PCDH8-201ENST00000338862 NOA1Q8NC60 698 aaKnown RBP15.96■□□□□ 0.15
PCDH8-201ENST00000338862 CHP1Q99653 195 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms