RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 HERC5Q9UII4 1024 aaKnown RBP25.38■■□□□ 1.65
TPM1-204ENST00000334895 TAOK2Q9UL54 1235 aa25.38■■□□□ 1.65
TPM1-204ENST00000334895 SSC5DA1L4H1 1573 aa25.38■■□□□ 1.65
TPM1-204ENST00000334895 TBC1D12O60347 775 aa25.37■■□□□ 1.65
TPM1-204ENST00000334895 AK2P54819 239 aa25.37■■□□□ 1.65
TPM1-204ENST00000334895 MIGA2Q7L4E1 593 aa25.37■■□□□ 1.65
TPM1-204ENST00000334895 TFAP4Q01664 338 aa25.37■■□□□ 1.65
TPM1-204ENST00000334895 TOB2Q14106 344 aaPredicted RBP25.37■■□□□ 1.65
TPM1-204ENST00000334895 RRP1BQ14684 758 aaKnown RBP25.37■■□□□ 1.65
TPM1-204ENST00000334895 Q6ZUG5 572 aa25.37■■□□□ 1.65
TPM1-204ENST00000334895 KRT26Q7Z3Y9 468 aa25.37■■□□□ 1.65
TPM1-204ENST00000334895 SULF1Q8IWU6 871 aa25.37■■□□□ 1.65
TPM1-204ENST00000334895 AGXT2Q9BYV1 514 aa25.37■■□□□ 1.65
TPM1-204ENST00000334895 ALDH8A1Q9H2A2 487 aaPredicted RBP25.37■■□□□ 1.65
TPM1-204ENST00000334895 GREB1LQ9C091 1923 aaPredicted RBP25.37■■□□□ 1.65
TPM1-204ENST00000334895 ST18O60284 1047 aa25.36■■□□□ 1.65
TPM1-204ENST00000334895 MAP1SQ66K74 1059 aaPredicted RBP25.36■■□□□ 1.65
TPM1-204ENST00000334895 CHADLQ6NUI6 762 aa25.36■■□□□ 1.65
TPM1-204ENST00000334895 ZNF444Q8N0Y2 327 aaPredicted RBP25.36■■□□□ 1.65
TPM1-204ENST00000334895 SMC1BQ8NDV3 1235 aa25.36■■□□□ 1.65
TPM1-204ENST00000334895 ZKSCAN3Q9BRR0 538 aa25.36■■□□□ 1.65
TPM1-204ENST00000334895 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.36■■□□□ 1.65
TPM1-204ENST00000334895 TSPY2A6NKD2 308 aa25.35■■□□□ 1.65
TPM1-204ENST00000334895 AKR1B1P15121 316 aa25.35■■□□□ 1.65
TPM1-204ENST00000334895 NT5C2P49902 561 aa25.35■■□□□ 1.65
TPM1-204ENST00000334895 SHROOM1Q2M3G4 852 aaPredicted RBP25.35■■□□□ 1.65
TPM1-204ENST00000334895 FBXL16Q8N461 479 aa25.35■■□□□ 1.65
TPM1-204ENST00000334895 IGDCC4Q8TDY8 1250 aa25.35■■□□□ 1.65
TPM1-204ENST00000334895 SNX21Q969T3 373 aa25.35■■□□□ 1.65
TPM1-204ENST00000334895 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.35■■□□□ 1.65
TPM1-204ENST00000334895 TRIM34Q9BYJ4 488 aa25.35■■□□□ 1.65
TPM1-204ENST00000334895 NMT2O60551 498 aa25.34■■□□□ 1.65
TPM1-204ENST00000334895 ANP32AP39687 249 aaKnown RBP25.34■■□□□ 1.65
TPM1-204ENST00000334895 USP48Q86UV5 1035 aa25.34■■□□□ 1.65
TPM1-204ENST00000334895 TRPM7Q96QT4 1865 aa25.34■■□□□ 1.65
TPM1-204ENST00000334895 LARP6Q9BRS8 491 aaKnown RBP25.34■■□□□ 1.65
TPM1-204ENST00000334895 IL17RBQ9NRM6 502 aa25.34■■□□□ 1.65
TPM1-204ENST00000334895 PLIN4Q96Q06 1357 aa25.34■■□□□ 1.65
TPM1-204ENST00000334895 SH2B2O14492 632 aaPredicted RBP25.34■■□□□ 1.65
TPM1-204ENST00000334895 IL27Q8NEV9 243 aa25.34■■□□□ 1.65
TPM1-204ENST00000334895 NEDD1Q8NHV4 660 aa25.34■■□□□ 1.65
TPM1-204ENST00000334895 GLIS2Q9BZE0 524 aaPredicted RBP25.34■■□□□ 1.65
TPM1-204ENST00000334895 SENP2Q9HC62 589 aa25.34■■□□□ 1.65
TPM1-204ENST00000334895 TSPY3P0CV98 308 aa25.33■■□□□ 1.65
TPM1-204ENST00000334895 TSPY8P0CW00 308 aa25.33■■□□□ 1.65
TPM1-204ENST00000334895 JAG1P78504 1218 aa25.33■■□□□ 1.65
TPM1-204ENST00000334895 TMEM87BQ96K49 555 aa25.33■■□□□ 1.65
TPM1-204ENST00000334895 ZSCAN10Q96SZ4 725 aaPredicted RBP25.33■■□□□ 1.65
TPM1-204ENST00000334895 TBC1D2Q9BYX2 928 aa25.33■■□□□ 1.65
TPM1-204ENST00000334895 TNKSO95271 1327 aa25.32■■□□□ 1.64
TPM1-204ENST00000334895 SEC23AQ15436 765 aa25.32■■□□□ 1.64
TPM1-204ENST00000334895 CERKLQ49MI3 558 aaPredicted RBP25.32■■□□□ 1.64
TPM1-204ENST00000334895 NOL8Q76FK4 1167 aaKnown RBP25.32■■□□□ 1.64
TPM1-204ENST00000334895 BRF1Q92994 677 aa25.32■■□□□ 1.64
TPM1-204ENST00000334895 MTA3Q9BTC8 594 aa25.32■■□□□ 1.64
TPM1-204ENST00000334895 LY9Q9HBG7 655 aa25.32■■□□□ 1.64
TPM1-204ENST00000334895 PHF20L1A8MW92 1017 aa25.31■■□□□ 1.64
TPM1-204ENST00000334895 IFIT3O14879 490 aaKnown RBP25.31■■□□□ 1.64
TPM1-204ENST00000334895 TMEM67Q5HYA8 995 aa25.31■■□□□ 1.64
TPM1-204ENST00000334895 ENAHQ8N8S7 591 aaPredicted RBP25.31■■□□□ 1.64
TPM1-204ENST00000334895 CCDC17Q96LX7 622 aa25.31■■□□□ 1.64
TPM1-204ENST00000334895 UBAC1Q9BSL1 405 aa25.31■■□□□ 1.64
TPM1-204ENST00000334895 TCP11L1Q9NUJ3 509 aa25.31■■□□□ 1.64
TPM1-204ENST00000334895 ANGEL1Q9UNK9 670 aaKnown RBP25.31■■□□□ 1.64
TPM1-204ENST00000334895 IGKV6D-41A0A0C4DH26 115 aa25.3■■□□□ 1.64
TPM1-204ENST00000334895 GDF11O95390 407 aa25.3■■□□□ 1.64
TPM1-204ENST00000334895 CDC37L1Q7L3B6 337 aa25.3■■□□□ 1.64
TPM1-204ENST00000334895 IQCA1Q86XH1 822 aa25.3■■□□□ 1.64
TPM1-204ENST00000334895 FZD1Q9UP38 647 aa25.3■■□□□ 1.64
TPM1-204ENST00000334895 C1QTNF8P60827 252 aa25.3■■□□□ 1.64
TPM1-204ENST00000334895 FGD1P98174 961 aa25.3■■□□□ 1.64
TPM1-204ENST00000334895 FSTL1Q12841 308 aa25.3■■□□□ 1.64
TPM1-204ENST00000334895 RCSD1Q6JBY9 416 aa25.3■■□□□ 1.64
TPM1-204ENST00000334895 CDCA5Q96FF9 252 aa25.3■■□□□ 1.64
TPM1-204ENST00000334895 TPCN1Q9ULQ1 816 aa25.3■■□□□ 1.64
TPM1-204ENST00000334895 SUPT20HL1Q3ZLR7 823 aa25.29■■□□□ 1.64
TPM1-204ENST00000334895 ATAD5Q96QE3 1844 aa25.28■■□□□ 1.64
TPM1-204ENST00000334895 LARGE1O95461 756 aa25.28■■□□□ 1.64
TPM1-204ENST00000334895 GUCY1A2P33402 732 aa25.28■■□□□ 1.64
TPM1-204ENST00000334895 LIFRP42702 1097 aa25.28■■□□□ 1.64
TPM1-204ENST00000334895 APOBRQ0VD83 1088 aa25.28■■□□□ 1.64
TPM1-204ENST00000334895 SART3Q15020 963 aaKnown RBP25.28■■□□□ 1.64
TPM1-204ENST00000334895 ANKRD1Q15327 319 aa25.28■■□□□ 1.64
TPM1-204ENST00000334895 DCAF15Q66K64 600 aa25.28■■□□□ 1.64
TPM1-204ENST00000334895 CLEC10AQ8IUN9 316 aa25.28■■□□□ 1.64
TPM1-204ENST00000334895 HOOK2Q96ED9 719 aa25.28■■□□□ 1.64
TPM1-204ENST00000334895 CEP95Q96GE4 821 aa25.28■■□□□ 1.64
TPM1-204ENST00000334895 BRPF3Q9ULD4 1205 aa25.28■■□□□ 1.64
TPM1-204ENST00000334895 MPHOSPH10O00566 681 aaKnown RBP25.27■■□□□ 1.64
TPM1-204ENST00000334895 ITGBL1O95965 494 aaPredicted RBP25.27■■□□□ 1.64
TPM1-204ENST00000334895 NOVP48745 357 aa25.27■■□□□ 1.64
TPM1-204ENST00000334895 MCM2P49736 904 aa25.27■■□□□ 1.64
TPM1-204ENST00000334895 EVCP57679 992 aa25.27■■□□□ 1.64
TPM1-204ENST00000334895 WTAPQ15007 396 aa25.27■■□□□ 1.64
TPM1-204ENST00000334895 ABCB5Q2M3G0 1257 aa25.27■■□□□ 1.64
TPM1-204ENST00000334895 SGMS1Q86VZ5 419 aa25.27■■□□□ 1.64
TPM1-204ENST00000334895 PAPPA2Q9BXP8 1791 aa25.27■■□□□ 1.64
TPM1-204ENST00000334895 GH2P01242 217 aa25.26■■□□□ 1.63
TPM1-204ENST00000334895 FMR1Q06787 632 aaKnown RBP eCLIP25.26■■□□□ 1.63
TPM1-204ENST00000334895 HSCBQ8IWL3 235 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms