RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 FMR1NBQ8N0W7 255 aaPredicted RBP14.35□□□□□ -0.11
RNF4-201ENST00000314289 CD209Q9NNX6 404 aa14.35□□□□□ -0.11
RNF4-201ENST00000314289 BRWD3Q6RI45 1802 aa14.35□□□□□ -0.11
RNF4-201ENST00000314289 ATL3Q6DD88 541 aa14.35□□□□□ -0.11
RNF4-201ENST00000314289 RBM43Q6ZSC3 357 aaKnown RBP14.35□□□□□ -0.11
RNF4-201ENST00000314289 KCNG4Q8TDN1 519 aa14.35□□□□□ -0.11
RNF4-201ENST00000314289 GGA1Q9UJY5 639 aa14.35□□□□□ -0.11
RNF4-201ENST00000314289 TIAM2Q8IVF5 1701 aa14.35□□□□□ -0.11
RNF4-201ENST00000314289 UBR3Q6ZT12 1888 aa14.35□□□□□ -0.11
RNF4-201ENST00000314289 APBA3O96018 575 aa14.35□□□□□ -0.11
RNF4-201ENST00000314289 CRY2Q49AN0 593 aa14.35□□□□□ -0.11
RNF4-201ENST00000314289 RBM17Q96I25 401 aaKnown RBP14.35□□□□□ -0.11
RNF4-201ENST00000314289 VEGFAP15692 232 aaPredicted RBP14.34□□□□□ -0.11
RNF4-201ENST00000314289 GRIN1Q05586 938 aa14.34□□□□□ -0.11
RNF4-201ENST00000314289 AXDND1Q5T1B0 1012 aaPredicted RBP14.34□□□□□ -0.11
RNF4-201ENST00000314289 CATIPQ7Z7H3 387 aa14.34□□□□□ -0.11
RNF4-201ENST00000314289 TMTC2Q8N394 836 aa14.34□□□□□ -0.11
RNF4-201ENST00000314289 MYRIPQ8NFW9 859 aa14.34□□□□□ -0.11
RNF4-201ENST00000314289 ECM29Q5VYK3 1845 aa14.34□□□□□ -0.11
RNF4-201ENST00000314289 YEATS4O95619 227 aa14.34□□□□□ -0.11
RNF4-201ENST00000314289 MMP1P03956 469 aa14.34□□□□□ -0.11
RNF4-201ENST00000314289 PFKFB1P16118 471 aa14.34□□□□□ -0.11
RNF4-201ENST00000314289 PLCD1P51178 756 aa14.34□□□□□ -0.11
RNF4-201ENST00000314289 NOLC1Q14978 699 aaKnown RBP eCLIP14.34□□□□□ -0.11
RNF4-201ENST00000314289 NOM1Q5C9Z4 860 aaKnown RBP14.34□□□□□ -0.11
RNF4-201ENST00000314289 SLC27A3Q5K4L6 730 aa14.34□□□□□ -0.11
RNF4-201ENST00000314289 WDR66Q8TBY9 1149 aa14.34□□□□□ -0.11
RNF4-201ENST00000314289 MXD3Q9BW11 206 aa14.34□□□□□ -0.11
RNF4-201ENST00000314289 ZHX1Q9UKY1 873 aaPredicted RBP14.34□□□□□ -0.11
RNF4-201ENST00000314289 USP17L3A6NCW0 530 aa14.33□□□□□ -0.11
RNF4-201ENST00000314289 USP17L4A6NCW7 530 aa14.33□□□□□ -0.11
RNF4-201ENST00000314289 SLC39A14Q15043 492 aa14.33□□□□□ -0.11
RNF4-201ENST00000314289 MFSD14BQ5SR56 506 aa14.33□□□□□ -0.11
RNF4-201ENST00000314289 USP17L1Q7RTZ2 530 aa14.33□□□□□ -0.11
RNF4-201ENST00000314289 COL23A1Q86Y22 540 aaPredicted RBP14.33□□□□□ -0.11
RNF4-201ENST00000314289 NOSTRINQ8IVI9 506 aa14.33□□□□□ -0.11
RNF4-201ENST00000314289 ATP8A2Q9NTI2 1148 aa14.33□□□□□ -0.11
RNF4-201ENST00000314289 ZNF219Q9P2Y4 722 aaPredicted RBP14.33□□□□□ -0.11
RNF4-201ENST00000314289 ZNF202O95125 648 aa14.33□□□□□ -0.12
RNF4-201ENST00000314289 U2AF2P26368 475 aaKnown RBP eCLIP14.33□□□□□ -0.126e-8■□□□□ 9.9
RNF4-201ENST00000314289 TOB1P50616 345 aaPredicted RBP14.33□□□□□ -0.12
RNF4-201ENST00000314289 TFAP4Q01664 338 aa14.33□□□□□ -0.12
RNF4-201ENST00000314289 AKAP17AQ02040 695 aaKnown RBP14.33□□□□□ -0.12
RNF4-201ENST00000314289 TROAPQ12815 778 aa14.33□□□□□ -0.12
RNF4-201ENST00000314289 SPTY2D1Q68D10 685 aaPredicted RBP14.33□□□□□ -0.12
RNF4-201ENST00000314289 RASGRP2Q7LDG7 609 aa14.33□□□□□ -0.12
RNF4-201ENST00000314289 TBC1D16Q8TBP0 767 aa14.33□□□□□ -0.12
RNF4-201ENST00000314289 MAP3K14Q99558 947 aa14.33□□□□□ -0.12
RNF4-201ENST00000314289 CABP5Q9NP86 173 aa14.33□□□□□ -0.12
RNF4-201ENST00000314289 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.33□□□□□ -0.12
RNF4-201ENST00000314289 DUOX1Q9NRD9 1551 aa14.33□□□□□ -0.12
RNF4-201ENST00000314289 CCDC196A0A1B0GTZ2 297 aa14.33□□□□□ -0.12
RNF4-201ENST00000314289 DEXIO95424 95 aa14.33□□□□□ -0.12
RNF4-201ENST00000314289 EARS2Q5JPH6 523 aaKnown RBP14.33□□□□□ -0.12
RNF4-201ENST00000314289 SHC4Q6S5L8 630 aa14.33□□□□□ -0.12
RNF4-201ENST00000314289 PCDHB6Q9Y5E3 794 aa14.33□□□□□ -0.12
RNF4-201ENST00000314289 GTF2IP78347 998 aa14.32□□□□□ -0.12
RNF4-201ENST00000314289 PTPAQ15257 358 aa14.32□□□□□ -0.12
RNF4-201ENST00000314289 SAFBQ15424 915 aaKnown RBP eCLIP14.32□□□□□ -0.12
RNF4-201ENST00000314289 TRIM5Q9C035 493 aa14.32□□□□□ -0.12
RNF4-201ENST00000314289 BTDP43251 543 aa14.32□□□□□ -0.12
RNF4-201ENST00000314289 PKN1Q16512 942 aa14.32□□□□□ -0.12
RNF4-201ENST00000314289 SMAP1Q8IYB5 467 aaPredicted RBP14.32□□□□□ -0.12
RNF4-201ENST00000314289 CCDC94Q9BW85 323 aaPredicted RBP14.32□□□□□ -0.12
RNF4-201ENST00000314289 MKNK2Q9HBH9 465 aa14.32□□□□□ -0.12
RNF4-201ENST00000314289 ARPP21Q9UBL0 812 aaPredicted RBP14.32□□□□□ -0.12
RNF4-201ENST00000314289 PDE4BQ07343 736 aa14.31□□□□□ -0.12
RNF4-201ENST00000314289 DOK7Q18PE1 504 aa14.31□□□□□ -0.12
RNF4-201ENST00000314289 STK36Q9NRP7 1315 aa14.31□□□□□ -0.12
RNF4-201ENST00000314289 A0A1W2PQ27 194 aa14.31□□□□□ -0.12
RNF4-201ENST00000314289 A0A1W2PQ64 194 aa14.31□□□□□ -0.12
RNF4-201ENST00000314289 A0A1W2PQD8 194 aa14.31□□□□□ -0.12
RNF4-201ENST00000314289 ADAMTS3O15072 1205 aa14.31□□□□□ -0.12
RNF4-201ENST00000314289 CCDC88AQ3V6T2 1871 aa14.31□□□□□ -0.12
RNF4-201ENST00000314289 DRC7Q8IY82 874 aa14.31□□□□□ -0.12
RNF4-201ENST00000314289 SRBD1Q8N5C6 995 aaKnown RBP14.31□□□□□ -0.12
RNF4-201ENST00000314289 WASF1Q92558 559 aa14.31□□□□□ -0.12
RNF4-201ENST00000314289 NRBP1Q9UHY1 535 aa14.31□□□□□ -0.12
RNF4-201ENST00000314289 CBX1P83916 185 aa14.3□□□□□ -0.12
RNF4-201ENST00000314289 DPCR1Q3MIW9 517 aa14.3□□□□□ -0.12
RNF4-201ENST00000314289 C12orf60Q5U649 245 aa14.3□□□□□ -0.12
RNF4-201ENST00000314289 IL17RBQ9NRM6 502 aa14.3□□□□□ -0.12
RNF4-201ENST00000314289 STX8Q9UNK0 236 aa14.3□□□□□ -0.12
RNF4-201ENST00000314289 PDS5AQ29RF7 1337 aaKnown RBP14.3□□□□□ -0.12
RNF4-201ENST00000314289 WNT7AO00755 349 aa14.3□□□□□ -0.12
RNF4-201ENST00000314289 SLC3A2P08195 630 aaKnown RBP14.3□□□□□ -0.12
RNF4-201ENST00000314289 FUT2Q10981 343 aa14.3□□□□□ -0.12
RNF4-201ENST00000314289 RCSD1Q6JBY9 416 aa14.3□□□□□ -0.12
RNF4-201ENST00000314289 ZNF710Q8N1W2 664 aa14.3□□□□□ -0.12
RNF4-201ENST00000314289 NOL10Q9BSC4 688 aaKnown RBP14.3□□□□□ -0.12
RNF4-201ENST00000314289 CPVLQ9H3G5 476 aa14.3□□□□□ -0.12
RNF4-201ENST00000314289 PPEF1O14829 653 aaPredicted RBP14.3□□□□□ -0.12
RNF4-201ENST00000314289 BAG3O95817 575 aa14.3□□□□□ -0.12
RNF4-201ENST00000314289 MMP10P09238 476 aa14.3□□□□□ -0.12
RNF4-201ENST00000314289 FGRP09769 529 aa14.3□□□□□ -0.12
RNF4-201ENST00000314289 ATP2B4P23634 1241 aa14.3□□□□□ -0.12
RNF4-201ENST00000314289 SYKP43405 635 aa14.3□□□□□ -0.12
RNF4-201ENST00000314289 PICALMQ13492 652 aa14.3□□□□□ -0.12
RNF4-201ENST00000314289 STX1AQ16623 288 aa14.3□□□□□ -0.12
RNF4-201ENST00000314289 PDILTQ8N807 584 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms