RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 GSG1L2A8MUP6 293 aa16.38■□□□□ 0.21
RAB40A-201ENST00000304236 U2AF2P26368 475 aaKnown RBP eCLIP16.38■□□□□ 0.21
RAB40A-201ENST00000304236 RCAN1P53805 252 aa16.38■□□□□ 0.21
RAB40A-201ENST00000304236 NLRP12P59046 1061 aa16.38■□□□□ 0.21
RAB40A-201ENST00000304236 RBM10P98175 930 aaKnown RBP16.38■□□□□ 0.21
RAB40A-201ENST00000304236 DHX8Q14562 1220 aaKnown RBP16.38■□□□□ 0.21
RAB40A-201ENST00000304236 CRY2Q49AN0 593 aa16.38■□□□□ 0.21
RAB40A-201ENST00000304236 RNF41Q9H4P4 317 aaPredicted RBP16.38■□□□□ 0.21
RAB40A-201ENST00000304236 ARMT1Q9H993 441 aa16.38■□□□□ 0.21
RAB40A-201ENST00000304236 SEC31BQ9NQW1 1179 aa16.38■□□□□ 0.21
RAB40A-201ENST00000304236 DICER1Q9UPY3 1922 aaKnown RBP16.37■□□□□ 0.21
RAB40A-201ENST00000304236 FAM237AA0A1B0GTK4 181 aa16.37■□□□□ 0.21
RAB40A-201ENST00000304236 SMTNL1A8MU46 457 aa16.37■□□□□ 0.21
RAB40A-201ENST00000304236 NTSR2O95665 410 aa16.37■□□□□ 0.21
RAB40A-201ENST00000304236 IFNAR1P17181 557 aa16.37■□□□□ 0.21
RAB40A-201ENST00000304236 HTRA3P83110 453 aa16.37■□□□□ 0.21
RAB40A-201ENST00000304236 AOPEPQ8N6M6 819 aa16.37■□□□□ 0.21
RAB40A-201ENST00000304236 CACTINQ8WUQ7 758 aaKnown RBP16.37■□□□□ 0.21
RAB40A-201ENST00000304236 RPGRQ92834 1020 aaKnown RBP16.37■□□□□ 0.21
RAB40A-201ENST00000304236 GJB4Q9NTQ9 266 aa16.37■□□□□ 0.21
RAB40A-201ENST00000304236 ZSWIM5Q9P217 1185 aa16.37■□□□□ 0.21
RAB40A-201ENST00000304236 WDR90Q96KV7 1748 aa16.37■□□□□ 0.21
RAB40A-201ENST00000304236 CACNA1SQ13698 1873 aa16.37■□□□□ 0.21
RAB40A-201ENST00000304236 DDNO94850 711 aaPredicted RBP16.37■□□□□ 0.21
RAB40A-201ENST00000304236 FMNL1O95466 1100 aaPredicted RBP16.37■□□□□ 0.21
RAB40A-201ENST00000304236 PFKFB1P16118 471 aa16.37■□□□□ 0.21
RAB40A-201ENST00000304236 TDO2P48775 406 aa16.37■□□□□ 0.21
RAB40A-201ENST00000304236 LRMPQ12912 555 aa16.37■□□□□ 0.21
RAB40A-201ENST00000304236 LRRC8AQ8IWT6 810 aa16.37■□□□□ 0.21
RAB40A-201ENST00000304236 KLRG1Q96E93 195 aa16.37■□□□□ 0.21
RAB40A-201ENST00000304236 FAM217BQ9NTX9 383 aaPredicted RBP16.37■□□□□ 0.21
RAB40A-201ENST00000304236 SLC4A4Q9Y6R1 1079 aa16.37■□□□□ 0.21
RAB40A-201ENST00000304236 CCDC196A0A1B0GTZ2 297 aa16.36■□□□□ 0.21
RAB40A-201ENST00000304236 ERICH2A1L162 156 aa16.36■□□□□ 0.21
RAB40A-201ENST00000304236 GSDMDP57764 484 aa16.36■□□□□ 0.21
RAB40A-201ENST00000304236 CTDSPL2Q05D32 466 aa16.36■□□□□ 0.21
RAB40A-201ENST00000304236 OLFM4Q6UX06 510 aa16.36■□□□□ 0.21
RAB40A-201ENST00000304236 NKX2-3Q8TAU0 364 aa16.36■□□□□ 0.21
RAB40A-201ENST00000304236 PHKBQ93100 1093 aa16.36■□□□□ 0.21
RAB40A-201ENST00000304236 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.36■□□□□ 0.21
RAB40A-201ENST00000304236 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.36■□□□□ 0.21
RAB40A-201ENST00000304236 ZNF277Q9NRM2 450 aaPredicted RBP16.36■□□□□ 0.21
RAB40A-201ENST00000304236 GNL3LQ9NVN8 582 aaKnown RBP16.36■□□□□ 0.21
RAB40A-201ENST00000304236 IMPACTQ9P2X3 320 aa16.36■□□□□ 0.21
RAB40A-201ENST00000304236 ECM29Q5VYK3 1845 aa16.36■□□□□ 0.21
RAB40A-201ENST00000304236 CUTAO60888 179 aa16.35■□□□□ 0.21
RAB40A-201ENST00000304236 RXRAP19793 462 aa16.35■□□□□ 0.21
RAB40A-201ENST00000304236 SYKP43405 635 aa16.35■□□□□ 0.21
RAB40A-201ENST00000304236 BCAMP50895 628 aa16.35■□□□□ 0.21
RAB40A-201ENST00000304236 PTPAQ15257 358 aa16.35■□□□□ 0.21
RAB40A-201ENST00000304236 SAFBQ15424 915 aaKnown RBP eCLIP16.35■□□□□ 0.21
RAB40A-201ENST00000304236 CCDC144BQ3MJ40 725 aa16.35■□□□□ 0.21
RAB40A-201ENST00000304236 CC2D2BQ6DHV5 1058 aa16.35■□□□□ 0.21
RAB40A-201ENST00000304236 CCDC144CPQ8IYA2 1237 aa16.35■□□□□ 0.21
RAB40A-201ENST00000304236 TRIM22Q8IYM9 498 aa16.35■□□□□ 0.21
RAB40A-201ENST00000304236 AIFM3Q96NN9 605 aa16.35■□□□□ 0.21
RAB40A-201ENST00000304236 SENP2Q9HC62 589 aa16.35■□□□□ 0.21
RAB40A-201ENST00000304236 LRP2BPQ9P2M1 347 aa16.35■□□□□ 0.21
RAB40A-201ENST00000304236 HPSEQ9Y251 543 aa16.35■□□□□ 0.21
RAB40A-201ENST00000304236 RANBP6O60518 1105 aaKnown RBP16.35■□□□□ 0.21
RAB40A-201ENST00000304236 WDHD1O75717 1129 aaPredicted RBP16.35■□□□□ 0.21
RAB40A-201ENST00000304236 HOXA10P31260 410 aaPredicted RBP16.35■□□□□ 0.21
RAB40A-201ENST00000304236 CHRNDQ07001 517 aa16.35■□□□□ 0.21
RAB40A-201ENST00000304236 WTAPQ15007 396 aa16.35■□□□□ 0.21
RAB40A-201ENST00000304236 MAP3K14Q99558 947 aa16.35■□□□□ 0.21
RAB40A-201ENST00000304236 SLC26A6Q9BXS9 759 aa16.35■□□□□ 0.21
RAB40A-201ENST00000304236 IQCA1LA6NCM1 817 aa16.34■□□□□ 0.21
RAB40A-201ENST00000304236 PPP2R5BQ15173 497 aa16.34■□□□□ 0.21
RAB40A-201ENST00000304236 RTN1Q16799 776 aa16.34■□□□□ 0.21
RAB40A-201ENST00000304236 ELOA2Q8IYF1 753 aaPredicted RBP16.34■□□□□ 0.21
RAB40A-201ENST00000304236 LCORLQ8N3X6 602 aa16.34■□□□□ 0.21
RAB40A-201ENST00000304236 RBM17Q96I25 401 aaKnown RBP16.34■□□□□ 0.21
RAB40A-201ENST00000304236 IKBKBO14920 756 aa16.33■□□□□ 0.21
RAB40A-201ENST00000304236 MARCKSP29966 332 aaPredicted RBP16.33■□□□□ 0.21
RAB40A-201ENST00000304236 GRIPAP1Q4V328 841 aa16.33■□□□□ 0.21
RAB40A-201ENST00000304236 RESP18Q5W5W9 173 aa16.33■□□□□ 0.21
RAB40A-201ENST00000304236 L3MBTL3Q96JM7 780 aaPredicted RBP16.33■□□□□ 0.21
RAB40A-201ENST00000304236 TUBE1Q9UJT0 475 aa16.33■□□□□ 0.21
RAB40A-201ENST00000304236 UBE4AQ14139 1066 aa16.33■□□□□ 0.2
RAB40A-201ENST00000304236 DPCR1Q3MIW9 517 aa16.33■□□□□ 0.2
RAB40A-201ENST00000304236 CHADLQ6NUI6 762 aa16.33■□□□□ 0.2
RAB40A-201ENST00000304236 UBE2Q2Q8WVN8 375 aa16.33■□□□□ 0.2
RAB40A-201ENST00000304236 ERCC4Q92889 916 aaPredicted RBP16.33■□□□□ 0.2
RAB40A-201ENST00000304236 CRAMP1Q96RY5 1269 aa16.33■□□□□ 0.2
RAB40A-201ENST00000304236 PSMD1Q99460 953 aa16.33■□□□□ 0.2
RAB40A-201ENST00000304236 OSBPL5Q9H0X9 879 aaPredicted RBP16.33■□□□□ 0.2
RAB40A-201ENST00000304236 ANAPC4Q9UJX5 808 aa16.33■□□□□ 0.2
RAB40A-201ENST00000304236 PAXBP1Q9Y5B6 917 aa16.33■□□□□ 0.2
RAB40A-201ENST00000304236 ZNF804BA4D1E1 1349 aa16.33■□□□□ 0.2
RAB40A-201ENST00000304236 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.32■□□□□ 0.2
RAB40A-201ENST00000304236 SNAP23O00161 211 aa16.32■□□□□ 0.2
RAB40A-201ENST00000304236 PRKAB2O43741 272 aa16.32■□□□□ 0.2
RAB40A-201ENST00000304236 DEXIO95424 95 aa16.32■□□□□ 0.2
RAB40A-201ENST00000304236 SF3B3Q15393 1217 aaKnown RBP16.32■□□□□ 0.2
RAB40A-201ENST00000304236 TPD52L1Q16890 204 aaPredicted RBP16.32■□□□□ 0.2
RAB40A-201ENST00000304236 NOSTRINQ8IVI9 506 aa16.32■□□□□ 0.2
RAB40A-201ENST00000304236 NLRP3Q96P20 1036 aa16.32■□□□□ 0.2
RAB40A-201ENST00000304236 FOXP1Q9H334 677 aaPredicted RBP16.32■□□□□ 0.2
RAB40A-201ENST00000304236 INCENPQ9NQS7 918 aa16.32■□□□□ 0.2
RAB40A-201ENST00000304236 TACC3Q9Y6A5 838 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms