RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 TACO1Q9BSH4 297 aaKnown RBP12.5□□□□□ -0.41
GCN1-201ENST00000300648 CTNND2Q9UQB3 1225 aa12.5□□□□□ -0.41
GCN1-201ENST00000300648 MAST3O60307 1309 aa12.5□□□□□ -0.41
GCN1-201ENST00000300648 ANO1Q5XXA6 986 aa12.5□□□□□ -0.41
GCN1-201ENST00000300648 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.5□□□□□ -0.41
GCN1-201ENST00000300648 CYP7A1P22680 504 aa12.5□□□□□ -0.41
GCN1-201ENST00000300648 STX2P32856 288 aa12.5□□□□□ -0.41
GCN1-201ENST00000300648 LINS1Q8NG48 757 aa12.5□□□□□ -0.41
GCN1-201ENST00000300648 MAGEF1Q9HAY2 307 aa12.5□□□□□ -0.41
GCN1-201ENST00000300648 KDM3AQ9Y4C1 1321 aa12.5□□□□□ -0.41
GCN1-201ENST00000300648 GOLGA8CPA6NN73 597 aa12.5□□□□□ -0.41
GCN1-201ENST00000300648 N4BP1O75113 896 aaKnown RBP12.5□□□□□ -0.41
GCN1-201ENST00000300648 FANCCQ00597 558 aa12.5□□□□□ -0.41
GCN1-201ENST00000300648 PEX26Q7Z412 305 aa12.5□□□□□ -0.41
GCN1-201ENST00000300648 CNPY4Q8N129 248 aa12.5□□□□□ -0.41
GCN1-201ENST00000300648 WDR62O43379 1518 aa12.5□□□□□ -0.41
GCN1-201ENST00000300648 A0A1B0GVL5 298 aa12.5□□□□□ -0.41
GCN1-201ENST00000300648 DCAF17Q5H9S7 520 aaPredicted RBP12.5□□□□□ -0.41
GCN1-201ENST00000300648 BANK1Q8NDB2 785 aa12.5□□□□□ -0.41
GCN1-201ENST00000300648 NSMCE1Q8WV22 266 aa12.5□□□□□ -0.41
GCN1-201ENST00000300648 EYA3Q99504 573 aa12.5□□□□□ -0.41
GCN1-201ENST00000300648 P4HA1P13674 534 aa12.49□□□□□ -0.41
GCN1-201ENST00000300648 NECAB1Q8N987 351 aa12.49□□□□□ -0.41
GCN1-201ENST00000300648 VAT1LQ9HCJ6 419 aa12.49□□□□□ -0.41
GCN1-201ENST00000300648 TPCN1Q9ULQ1 816 aa12.49□□□□□ -0.41
GCN1-201ENST00000300648 KRT15P19012 456 aa12.49□□□□□ -0.41
GCN1-201ENST00000300648 LMNB2Q03252 620 aa12.49□□□□□ -0.41
GCN1-201ENST00000300648 THAP12O43422 761 aa12.49□□□□□ -0.41
GCN1-201ENST00000300648 RSPH3Q86UC2 560 aa12.49□□□□□ -0.41
GCN1-201ENST00000300648 CSGALNACT2Q8N6G5 542 aa12.49□□□□□ -0.41
GCN1-201ENST00000300648 STAG1Q8WVM7 1258 aa12.49□□□□□ -0.41
GCN1-201ENST00000300648 AK9Q5TCS8 1911 aa12.49□□□□□ -0.41
GCN1-201ENST00000300648 IGHDP01880 384 aa12.49□□□□□ -0.41
GCN1-201ENST00000300648 SEPT2Q15019 361 aa12.49□□□□□ -0.41
GCN1-201ENST00000300648 PARP1P09874 1014 aaKnown RBP12.49□□□□□ -0.41
GCN1-201ENST00000300648 CUL4BQ13620 913 aa12.49□□□□□ -0.41
GCN1-201ENST00000300648 UAP1Q16222 522 aaPredicted RBP12.49□□□□□ -0.41
GCN1-201ENST00000300648 NT5C3AQ9H0P0 336 aa12.49□□□□□ -0.41
GCN1-201ENST00000300648 MIS18AQ9NYP9 233 aa12.49□□□□□ -0.41
GCN1-201ENST00000300648 SFMBT2Q5VUG0 894 aa12.49□□□□□ -0.41
GCN1-201ENST00000300648 NRBF2Q96F24 287 aa12.49□□□□□ -0.41
GCN1-201ENST00000300648 CNOT10Q9H9A5 744 aaKnown RBP12.49□□□□□ -0.41
GCN1-201ENST00000300648 NPATQ14207 1427 aa12.49□□□□□ -0.41
GCN1-201ENST00000300648 PTCD1O75127 700 aaKnown RBP12.49□□□□□ -0.41
GCN1-201ENST00000300648 SLC12A2P55011 1212 aa12.49□□□□□ -0.41
GCN1-201ENST00000300648 SLC9C2Q5TAH2 1124 aa12.49□□□□□ -0.41
GCN1-201ENST00000300648 NLRP3Q96P20 1036 aa12.49□□□□□ -0.41
GCN1-201ENST00000300648 HAUS7Q99871 368 aa12.49□□□□□ -0.41
GCN1-201ENST00000300648 RIC8AQ9NPQ8 531 aa12.49□□□□□ -0.41
GCN1-201ENST00000300648 PPP1R9AQ9ULJ8 1098 aa12.49□□□□□ -0.41
GCN1-201ENST00000300648 TCP1P17987 556 aaKnown RBP12.48□□□□□ -0.41
GCN1-201ENST00000300648 ESRRGP62508 458 aa12.48□□□□□ -0.41
GCN1-201ENST00000300648 DDX41Q9UJV9 622 aaKnown RBP12.48□□□□□ -0.41
GCN1-201ENST00000300648 RPS6KB1P23443 525 aa12.48□□□□□ -0.41
GCN1-201ENST00000300648 GJC1P36383 396 aa12.48□□□□□ -0.41
GCN1-201ENST00000300648 COG7P83436 770 aa12.48□□□□□ -0.41
GCN1-201ENST00000300648 CAPS2Q9BXY5 557 aa12.48□□□□□ -0.41
GCN1-201ENST00000300648 CTNNA1P35221 906 aaKnown RBP12.48□□□□□ -0.41
GCN1-201ENST00000300648 ZNF622Q969S3 477 aaKnown RBP eCLIP12.48□□□□□ -0.413e-7■■■□□ 15.3
GCN1-201ENST00000300648 USP26Q9BXU7 913 aa12.48□□□□□ -0.41
GCN1-201ENST00000300648 SUN1O94901 812 aa12.48□□□□□ -0.41
GCN1-201ENST00000300648 IDI1Q13907 227 aa12.48□□□□□ -0.41
GCN1-201ENST00000300648 RABGGTAQ92696 567 aa12.48□□□□□ -0.41
GCN1-201ENST00000300648 C6orf229H3BNL8 230 aa12.48□□□□□ -0.41
GCN1-201ENST00000300648 ANKRD20A4Q4UJ75 823 aa12.48□□□□□ -0.41
GCN1-201ENST00000300648 ANKRD20A8PQ5CZ79 823 aa12.48□□□□□ -0.41
GCN1-201ENST00000300648 ANKRD20A2Q5SQ80 823 aa12.48□□□□□ -0.41
GCN1-201ENST00000300648 ANKRD20A1Q5TYW2 823 aa12.48□□□□□ -0.41
GCN1-201ENST00000300648 THUMPD2Q9BTF0 503 aaKnown RBP12.48□□□□□ -0.41
GCN1-201ENST00000300648 ANGEL1Q9UNK9 670 aaKnown RBP12.48□□□□□ -0.41
GCN1-201ENST00000300648 NMIQ13287 307 aaPredicted RBP12.48□□□□□ -0.41
GCN1-201ENST00000300648 GSDMBQ8TAX9 411 aa12.48□□□□□ -0.41
GCN1-201ENST00000300648 TSC1Q92574 1164 aa12.48□□□□□ -0.41
GCN1-201ENST00000300648 ZNF277Q9NRM2 450 aaPredicted RBP12.48□□□□□ -0.41
GCN1-201ENST00000300648 BZW2Q9Y6E2 419 aaKnown RBP12.48□□□□□ -0.41
GCN1-201ENST00000300648 RFC4P35249 363 aa12.48□□□□□ -0.41
GCN1-201ENST00000300648 NBPF5PQ86XG9 351 aaPredicted RBP12.48□□□□□ -0.41
GCN1-201ENST00000300648 FAF1Q9UNN5 650 aaPredicted RBP12.48□□□□□ -0.41
GCN1-201ENST00000300648 CCDC105Q8IYK2 499 aa12.47□□□□□ -0.41
GCN1-201ENST00000300648 AMFRQ9UKV5 643 aa12.47□□□□□ -0.41
GCN1-201ENST00000300648 CDC25BP30305 580 aa12.47□□□□□ -0.41
GCN1-201ENST00000300648 CCT6AP40227 531 aaKnown RBP12.47□□□□□ -0.41
GCN1-201ENST00000300648 SLC17A8Q8NDX2 589 aa12.47□□□□□ -0.41
GCN1-201ENST00000300648 ORC6Q9Y5N6 252 aa12.47□□□□□ -0.41
GCN1-201ENST00000300648 KRT5P13647 590 aa12.47□□□□□ -0.41
GCN1-201ENST00000300648 POSTNQ15063 836 aa12.47□□□□□ -0.41
GCN1-201ENST00000300648 VTI1AQ96AJ9 217 aa12.47□□□□□ -0.41
GCN1-201ENST00000300648 H0YCG3 227 aa12.47□□□□□ -0.41
GCN1-201ENST00000300648 RIMS2Q9UQ26 1411 aa12.47□□□□□ -0.41
GCN1-201ENST00000300648 CHMLP26374 656 aa12.47□□□□□ -0.41
GCN1-201ENST00000300648 TTLL12Q14166 644 aaPredicted RBP12.47□□□□□ -0.41
GCN1-201ENST00000300648 CCDC68Q9H2F9 335 aa12.47□□□□□ -0.41
GCN1-201ENST00000300648 BAG5Q9UL15 447 aa12.47□□□□□ -0.41
GCN1-201ENST00000300648 TOM1O60784 492 aa12.46□□□□□ -0.41
GCN1-201ENST00000300648 SETDB2Q96T68 719 aa12.46□□□□□ -0.41
GCN1-201ENST00000300648 EFHD1Q9BUP0 239 aa12.46□□□□□ -0.41
GCN1-201ENST00000300648 VEZTQ9HBM0 779 aa12.46□□□□□ -0.41
GCN1-201ENST00000300648 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.46□□□□□ -0.41
GCN1-201ENST00000300648 CCDC184Q52MB2 194 aa12.46□□□□□ -0.41
GCN1-201ENST00000300648 FBXO41Q8TF61 875 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 288 ms