RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 SLC27A3Q5K4L6 730 aa16.15■□□□□ 0.18
NXF1-201ENST00000294172 SHC4Q6S5L8 630 aa16.15■□□□□ 0.18
NXF1-201ENST00000294172 KRT27Q7Z3Y8 459 aa16.15■□□□□ 0.18
NXF1-201ENST00000294172 SH3RF3Q8TEJ3 882 aaPredicted RBP16.15■□□□□ 0.18
NXF1-201ENST00000294172 RBM17Q96I25 401 aaKnown RBP16.15■□□□□ 0.18
NXF1-201ENST00000294172 KIAA1468Q9P260 1216 aa16.15■□□□□ 0.18
NXF1-201ENST00000294172 V9GY48 417 aaPredicted RBP16.15■□□□□ 0.18
NXF1-201ENST00000294172 TSPY2A6NKD2 308 aa16.14■□□□□ 0.18
NXF1-201ENST00000294172 GOLGA6L6A8MZA4 724 aa16.14■□□□□ 0.18
NXF1-201ENST00000294172 ATP2B1P20020 1258 aa16.14■□□□□ 0.18
NXF1-201ENST00000294172 SYKP43405 635 aa16.14■□□□□ 0.18
NXF1-201ENST00000294172 TROAPQ12815 778 aa16.14■□□□□ 0.18
NXF1-201ENST00000294172 CRY2Q49AN0 593 aa16.14■□□□□ 0.18
NXF1-201ENST00000294172 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.14■□□□□ 0.18
NXF1-201ENST00000294172 CEP57L1Q8IYX8 460 aa16.14■□□□□ 0.18
NXF1-201ENST00000294172 OXER1Q8TDS5 423 aa16.14■□□□□ 0.18
NXF1-201ENST00000294172 RNF26Q9BY78 433 aaPredicted RBP16.14■□□□□ 0.18
NXF1-201ENST00000294172 FOXP1Q9H334 677 aaPredicted RBP16.14■□□□□ 0.18
NXF1-201ENST00000294172 VPS54Q9P1Q0 977 aa16.14■□□□□ 0.18
NXF1-201ENST00000294172 BIN1O00499 593 aa16.14■□□□□ 0.17
NXF1-201ENST00000294172 TOB1P50616 345 aaPredicted RBP16.14■□□□□ 0.17
NXF1-201ENST00000294172 ZNF75DP51815 510 aa16.14■□□□□ 0.17
NXF1-201ENST00000294172 CALM1P0DP23 149 aa16.13■□□□□ 0.17
NXF1-201ENST00000294172 CALM2P0DP24 149 aa16.13■□□□□ 0.17
NXF1-201ENST00000294172 CALM3P0DP25 149 aa16.13■□□□□ 0.17
NXF1-201ENST00000294172 SBK1Q52WX2 424 aa16.13■□□□□ 0.17
NXF1-201ENST00000294172 RBM28Q9NW13 759 aaKnown RBP16.13■□□□□ 0.17
NXF1-201ENST00000294172 GGA1Q9UJY5 639 aa16.13■□□□□ 0.17
NXF1-201ENST00000294172 XBP1P17861 261 aa16.13■□□□□ 0.17
NXF1-201ENST00000294172 GSTO1P78417 241 aa16.13■□□□□ 0.17
NXF1-201ENST00000294172 DDR1Q08345 913 aa16.13■□□□□ 0.17
NXF1-201ENST00000294172 TMED8Q6PL24 325 aaPredicted RBP16.13■□□□□ 0.17
NXF1-201ENST00000294172 PLA2G4DQ86XP0 818 aa16.13■□□□□ 0.17
NXF1-201ENST00000294172 NOL10Q9BSC4 688 aaKnown RBP16.13■□□□□ 0.17
NXF1-201ENST00000294172 NAT10Q9H0A0 1025 aaKnown RBP16.13■□□□□ 0.17
NXF1-201ENST00000294172 CABP5Q9NP86 173 aa16.13■□□□□ 0.17
NXF1-201ENST00000294172 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.13■□□□□ 0.17
NXF1-201ENST00000294172 DDAH1O94760 285 aa16.12■□□□□ 0.17
NXF1-201ENST00000294172 BAG3O95817 575 aa16.12■□□□□ 0.17
NXF1-201ENST00000294172 PKN1Q16512 942 aa16.12■□□□□ 0.17
NXF1-201ENST00000294172 RILPL1Q5EBL4 403 aa16.12■□□□□ 0.17
NXF1-201ENST00000294172 SPECC1Q5M775 1068 aa16.12■□□□□ 0.17
NXF1-201ENST00000294172 DHX40Q8IX18 779 aaKnown RBP16.12■□□□□ 0.17
NXF1-201ENST00000294172 C17orf53Q8N3J3 647 aaPredicted RBP16.12■□□□□ 0.17
NXF1-201ENST00000294172 CTCFLQ8NI51 663 aaPredicted RBP16.12■□□□□ 0.17
NXF1-201ENST00000294172 DYNLL2Q96FJ2 89 aa16.12■□□□□ 0.17
NXF1-201ENST00000294172 CD209Q9NNX6 404 aa16.12■□□□□ 0.17
NXF1-201ENST00000294172 CUTAO60888 179 aa16.12■□□□□ 0.17
NXF1-201ENST00000294172 ATP2B4P23634 1241 aa16.12■□□□□ 0.17
NXF1-201ENST00000294172 FUT2Q10981 343 aa16.12■□□□□ 0.17
NXF1-201ENST00000294172 DPCR1Q3MIW9 517 aa16.12■□□□□ 0.17
NXF1-201ENST00000294172 RESP18Q5W5W9 173 aa16.12■□□□□ 0.17
NXF1-201ENST00000294172 AOPEPQ8N6M6 819 aa16.12■□□□□ 0.17
NXF1-201ENST00000294172 KRI1Q8N9T8 703 aaKnown RBP16.12■□□□□ 0.17
NXF1-201ENST00000294172 TGFBRAP1Q8WUH2 860 aa16.12■□□□□ 0.17
NXF1-201ENST00000294172 PIBF1Q8WXW3 757 aa16.12■□□□□ 0.17
NXF1-201ENST00000294172 SHISA4Q96DD7 197 aa16.12■□□□□ 0.17
NXF1-201ENST00000294172 CCDC88AQ3V6T2 1871 aa16.12■□□□□ 0.17
NXF1-201ENST00000294172 PRPF3O43395 683 aaKnown RBP16.11■□□□□ 0.17
NXF1-201ENST00000294172 PTGS1P23219 599 aa16.11■□□□□ 0.17
NXF1-201ENST00000294172 TFAP4Q01664 338 aa16.11■□□□□ 0.17
NXF1-201ENST00000294172 ISM2Q6H9L7 571 aa16.11■□□□□ 0.17
NXF1-201ENST00000294172 KCNF1Q9H3M0 494 aa16.11■□□□□ 0.17
NXF1-201ENST00000294172 HPSEQ9Y251 543 aa16.11■□□□□ 0.17
NXF1-201ENST00000294172 PCDHB6Q9Y5E3 794 aa16.11■□□□□ 0.17
NXF1-201ENST00000294172 UBR3Q6ZT12 1888 aa16.11■□□□□ 0.17
NXF1-201ENST00000294172 BBOX1O75936 387 aa16.11■□□□□ 0.17
NXF1-201ENST00000294172 TPM3P06753 285 aa16.11■□□□□ 0.17
NXF1-201ENST00000294172 TXNRD1Q16881 649 aa16.11■□□□□ 0.17
NXF1-201ENST00000294172 C12orf60Q5U649 245 aa16.11■□□□□ 0.17
NXF1-201ENST00000294172 TMTC3Q6ZXV5 915 aa16.11■□□□□ 0.17
NXF1-201ENST00000294172 MKNK2Q9HBH9 465 aa16.11■□□□□ 0.17
NXF1-201ENST00000294172 SAP30BPQ9UHR5 308 aaKnown RBP16.11■□□□□ 0.17
NXF1-201ENST00000294172 NRBP1Q9UHY1 535 aa16.11■□□□□ 0.17
NXF1-201ENST00000294172 C6orf229H3BNL8 230 aa16.1■□□□□ 0.17
NXF1-201ENST00000294172 POLRMTO00411 1230 aaKnown RBP16.1■□□□□ 0.17
NXF1-201ENST00000294172 C15orf52Q6ZUT6 534 aaKnown RBP16.1■□□□□ 0.17
NXF1-201ENST00000294172 CCDC186Q7Z3E2 898 aa16.1■□□□□ 0.17
NXF1-201ENST00000294172 MAPKAPK5Q8IW41 473 aa16.1■□□□□ 0.17
NXF1-201ENST00000294172 AMOTL1Q8IY63 956 aa16.1■□□□□ 0.17
NXF1-201ENST00000294172 SRBD1Q8N5C6 995 aaKnown RBP16.1■□□□□ 0.17
NXF1-201ENST00000294172 CLIP2Q9UDT6 1046 aa16.1■□□□□ 0.17
NXF1-201ENST00000294172 POLLQ9UGP5 575 aa16.1■□□□□ 0.17
NXF1-201ENST00000294172 MKRN1Q9UHC7 482 aaKnown RBP16.1■□□□□ 0.17
NXF1-201ENST00000294172 KCNH3Q9ULD8 1083 aa16.1■□□□□ 0.17
NXF1-201ENST00000294172 R3HCC1Q9Y3T6 440 aaKnown RBP16.1■□□□□ 0.17
NXF1-201ENST00000294172 ZBTB22O15209 634 aa16.1■□□□□ 0.17
NXF1-201ENST00000294172 LDHCP07864 332 aa16.1■□□□□ 0.17
NXF1-201ENST00000294172 GRIN1Q05586 938 aa16.1■□□□□ 0.17
NXF1-201ENST00000294172 PROM2Q8N271 834 aa16.1■□□□□ 0.17
NXF1-201ENST00000294172 TIGD1Q96MW7 591 aa16.1■□□□□ 0.17
NXF1-201ENST00000294172 BAZ2BQ9UIF8 2168 aaKnown RBP16.09■□□□□ 0.17
NXF1-201ENST00000294172 MAST2Q6P0Q8 1798 aa16.09■□□□□ 0.17
NXF1-201ENST00000294172 FAM205CA6NFA0 338 aa16.09■□□□□ 0.17
NXF1-201ENST00000294172 TPM2P07951 284 aa16.09■□□□□ 0.17
NXF1-201ENST00000294172 KRT2P35908 639 aa16.09■□□□□ 0.17
NXF1-201ENST00000294172 NOLC1Q14978 699 aaKnown RBP eCLIP16.09■□□□□ 0.17
NXF1-201ENST00000294172 LONRF3Q496Y0 759 aa16.09■□□□□ 0.17
NXF1-201ENST00000294172 TBC1D16Q8TBP0 767 aa16.09■□□□□ 0.17
NXF1-201ENST00000294172 PHF20Q9BVI0 1012 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms