RNA–Protein interactions for RNA: ENST00000216083.6

CBX6-201, Transcript of chromobox 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CBX6, Length 3,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-201ENST00000216083 ADAMTSL1Q8N6G6 1762 aa17.02■□□□□ 0.32
CBX6-201ENST00000216083 ERICH2A1L162 156 aa17.02■□□□□ 0.32
CBX6-201ENST00000216083 POLR3DP05423 398 aaPredicted RBP17.02■□□□□ 0.32
CBX6-201ENST00000216083 SLURP2P0DP57 97 aa17.02■□□□□ 0.32
CBX6-201ENST00000216083 SGMS1Q86VZ5 419 aa17.02■□□□□ 0.32
CBX6-201ENST00000216083 SLC16A10Q8TF71 515 aa17.02■□□□□ 0.32
CBX6-201ENST00000216083 TFIP11Q9UBB9 837 aaKnown RBP17.02■□□□□ 0.32
CBX6-201ENST00000216083 ORC3Q9UBD5 711 aaPredicted RBP17.02■□□□□ 0.32
CBX6-201ENST00000216083 SART3Q15020 963 aaKnown RBP17.02■□□□□ 0.31
CBX6-201ENST00000216083 PODNQ7Z5L7 613 aa17.02■□□□□ 0.31
CBX6-201ENST00000216083 ZNF277Q9NRM2 450 aaPredicted RBP17.02■□□□□ 0.31
CBX6-201ENST00000216083 USP25Q9UHP3 1055 aa17.02■□□□□ 0.31
CBX6-201ENST00000216083 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.02■□□□□ 0.31
CBX6-201ENST00000216083 LIFRP42702 1097 aa17.01■□□□□ 0.31
CBX6-201ENST00000216083 CACNB3P54284 484 aa17.01■□□□□ 0.31
CBX6-201ENST00000216083 GAKO14976 1311 aa17.01■□□□□ 0.31
CBX6-201ENST00000216083 FLT1P17948 1338 aa17.01■□□□□ 0.31
CBX6-201ENST00000216083 LRSAM1Q6UWE0 723 aa17.01■□□□□ 0.31
CBX6-201ENST00000216083 ZSCAN10Q96SZ4 725 aaPredicted RBP17.01■□□□□ 0.31
CBX6-201ENST00000216083 YDJCA8MPS7 323 aa17.01■□□□□ 0.31
CBX6-201ENST00000216083 U2AF2P26368 475 aaKnown RBP eCLIP17.01■□□□□ 0.31
CBX6-201ENST00000216083 HMGN5P82970 282 aaKnown RBP17.01■□□□□ 0.31
CBX6-201ENST00000216083 SEC23AQ15436 765 aa17.01■□□□□ 0.31
CBX6-201ENST00000216083 SBK1Q52WX2 424 aa17.01■□□□□ 0.31
CBX6-201ENST00000216083 DDX4Q9NQI0 724 aaKnown RBP17■□□□□ 0.31
CBX6-201ENST00000216083 TSPY2A6NKD2 308 aa17■□□□□ 0.31
CBX6-201ENST00000216083 HS1BP3Q53T59 392 aa17■□□□□ 0.31
CBX6-201ENST00000216083 ZNF654Q8IZM8 581 aa17■□□□□ 0.31
CBX6-201ENST00000216083 KIAA1551Q9HCM1 1747 aa17■□□□□ 0.31
CBX6-201ENST00000216083 BAZ2BQ9UIF8 2168 aaKnown RBP17■□□□□ 0.31
CBX6-201ENST00000216083 SNED1Q8TER0 1413 aa17■□□□□ 0.31
CBX6-201ENST00000216083 FGRP09769 529 aa16.99■□□□□ 0.31
CBX6-201ENST00000216083 RBM5P52756 815 aaKnown RBP eCLIP16.99■□□□□ 0.31
CBX6-201ENST00000216083 DACT2Q5SW24 774 aa16.99■□□□□ 0.31
CBX6-201ENST00000216083 FAM163AQ96GL9 167 aaPredicted RBP16.99■□□□□ 0.31
CBX6-201ENST00000216083 USP17L3A6NCW0 530 aa16.99■□□□□ 0.31
CBX6-201ENST00000216083 USP17L4A6NCW7 530 aa16.99■□□□□ 0.31
CBX6-201ENST00000216083 DHX16O60231 1041 aaKnown RBP16.99■□□□□ 0.31
CBX6-201ENST00000216083 TFAP4Q01664 338 aa16.99■□□□□ 0.31
CBX6-201ENST00000216083 CEBPZQ03701 1054 aaKnown RBP16.99■□□□□ 0.31
CBX6-201ENST00000216083 PDE4BQ07343 736 aa16.99■□□□□ 0.31
CBX6-201ENST00000216083 USP17L1Q7RTZ2 530 aa16.99■□□□□ 0.31
CBX6-201ENST00000216083 FTOQ9C0B1 505 aaKnown RBP eCLIP16.99■□□□□ 0.31
CBX6-201ENST00000216083 MKNK2Q9HBH9 465 aa16.99■□□□□ 0.31
CBX6-201ENST00000216083 USP40Q9NVE5 1235 aa16.99■□□□□ 0.31
CBX6-201ENST00000216083 MTMR7Q9Y216 660 aa16.99■□□□□ 0.31
CBX6-201ENST00000216083 NTRK3Q16288 839 aa16.99■□□□□ 0.31
CBX6-201ENST00000216083 IFIT1BQ5T764 474 aaKnown RBP16.99■□□□□ 0.31
CBX6-201ENST00000216083 SYNE3Q6ZMZ3 975 aa16.99■□□□□ 0.31
CBX6-201ENST00000216083 MTERF4Q7Z6M4 381 aaKnown RBP16.99■□□□□ 0.31
CBX6-201ENST00000216083 IQCA1Q86XH1 822 aa16.99■□□□□ 0.31
CBX6-201ENST00000216083 MYRIPQ8NFW9 859 aa16.99■□□□□ 0.31
CBX6-201ENST00000216083 CGNQ9P2M7 1197 aaKnown RBP16.99■□□□□ 0.31
CBX6-201ENST00000216083 CDK5RAP2Q96SN8 1893 aa16.99■□□□□ 0.31
CBX6-201ENST00000216083 hCG_1642624A0A1W2PR95 340 aa16.98■□□□□ 0.31
CBX6-201ENST00000216083 RAD17O75943 681 aa16.98■□□□□ 0.31
CBX6-201ENST00000216083 NFIAQ12857 509 aa16.98■□□□□ 0.31
CBX6-201ENST00000216083 CCDC125Q86Z20 511 aa16.98■□□□□ 0.31
CBX6-201ENST00000216083 SLF2Q8IX21 1173 aa16.98■□□□□ 0.31
CBX6-201ENST00000216083 SLC3A2P08195 630 aaKnown RBP16.98■□□□□ 0.31
CBX6-201ENST00000216083 GUCY1A2P33402 732 aa16.98■□□□□ 0.31
CBX6-201ENST00000216083 CRKP46108 304 aa16.98■□□□□ 0.31
CBX6-201ENST00000216083 RESTQ13127 1097 aa16.98■□□□□ 0.31
CBX6-201ENST00000216083 APOBEC3HQ6NTF7 200 aaKnown RBP16.98■□□□□ 0.31
CBX6-201ENST00000216083 SLC26A6Q9BXS9 759 aa16.98■□□□□ 0.31
CBX6-201ENST00000216083 CCDC93Q567U6 631 aa16.97■□□□□ 0.31
CBX6-201ENST00000216083 ATP6V1DQ9Y5K8 247 aa16.97■□□□□ 0.31
CBX6-201ENST00000216083 ORC4O43929 436 aa16.97■□□□□ 0.31
CBX6-201ENST00000216083 WDHD1O75717 1129 aaPredicted RBP16.97■□□□□ 0.31
CBX6-201ENST00000216083 RTN1Q16799 776 aa16.97■□□□□ 0.31
CBX6-201ENST00000216083 STRIP1Q5VSL9 837 aa16.97■□□□□ 0.31
CBX6-201ENST00000216083 CDC42EP5Q6NZY7 148 aa16.97■□□□□ 0.31
CBX6-201ENST00000216083 TMED8Q6PL24 325 aaPredicted RBP16.97■□□□□ 0.31
CBX6-201ENST00000216083 TEKT1Q969V4 418 aa16.97■□□□□ 0.31
CBX6-201ENST00000216083 C8orf76Q96K31 380 aa16.97■□□□□ 0.31
CBX6-201ENST00000216083 MTFR1LQ9H019 292 aa16.97■□□□□ 0.31
CBX6-201ENST00000216083 LAMB1P07942 1786 aa16.97■□□□□ 0.31
CBX6-201ENST00000216083 TCP10Q12799 353 aa16.97■□□□□ 0.31
CBX6-201ENST00000216083 ZFPM1Q8IX07 1006 aa16.97■□□□□ 0.31
CBX6-201ENST00000216083 LARGE2Q8N3Y3 721 aa16.97■□□□□ 0.31
CBX6-201ENST00000216083 IL17RBQ9NRM6 502 aa16.97■□□□□ 0.31
CBX6-201ENST00000216083 NAV1Q8NEY1 1877 aa16.97■□□□□ 0.31
CBX6-201ENST00000216083 POLD1P28340 1107 aa16.96■□□□□ 0.31
CBX6-201ENST00000216083 AMOTL1Q8IY63 956 aa16.96■□□□□ 0.31
CBX6-201ENST00000216083 PLCG2P16885 1265 aa16.96■□□□□ 0.31
CBX6-201ENST00000216083 IARSP41252 1262 aaKnown RBP16.96■□□□□ 0.31
CBX6-201ENST00000216083 TTC6Q86TZ1 520 aa16.96■□□□□ 0.31
CBX6-201ENST00000216083 PLCD3Q8N3E9 789 aa16.96■□□□□ 0.31
CBX6-201ENST00000216083 FANCBQ8NB91 859 aa16.96■□□□□ 0.31
CBX6-201ENST00000216083 UPF1Q92900 1129 aaKnown RBP eCLIP16.96■□□□□ 0.319e-7■■■■■ 28.6
CBX6-201ENST00000216083 ALG1Q9BT22 464 aa16.96■□□□□ 0.31
CBX6-201ENST00000216083 ZBTB12Q9Y330 459 aaPredicted RBP16.96■□□□□ 0.31
CBX6-201ENST00000216083 NOLC1Q14978 699 aaKnown RBP eCLIP16.95■□□□□ 0.3
CBX6-201ENST00000216083 COL4A5P29400 1685 aa16.95■□□□□ 0.3
CBX6-201ENST00000216083 RASGRP2Q7LDG7 609 aa16.95■□□□□ 0.3
CBX6-201ENST00000216083 PIBF1Q8WXW3 757 aa16.95■□□□□ 0.3
CBX6-201ENST00000216083 TSPY26PQ9H489 355 aa16.95■□□□□ 0.3
CBX6-201ENST00000216083 PLEKHA8P1O95397 391 aa16.95■□□□□ 0.3
CBX6-201ENST00000216083 CDK8P49336 464 aa16.95■□□□□ 0.3
CBX6-201ENST00000216083 RCSD1Q6JBY9 416 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms