RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 Gngt1Q61012 74 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Pola1P33609 1465 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Ets1P27577 440 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Card10P58660 1021 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Gtpbp6Q3U6U5 514 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Stxbp3Q60770 592 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Cracr2bQ80ZJ8 394 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Cadps2Q8BYR5 1297 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Tbx22Q8K402 517 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 4933428M09RikQ9D3X3 192 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Mtx1P47802 317 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Mindy4Q3UQI9 744 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 RragaQ80X95 313 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Lonp1Q8CGK3 949 aaKnown RBP13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Atp6v0a4Q920R6 833 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Tmod4Q9JLH8 345 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Dnajb7Q9QYI8 312 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Exoc3l2D3YUP5 789 aa13.04□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Mroh9G5E8L9 891 aa13.04□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Rnaseh1O70338 285 aa13.04□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Cct5P80316 541 aaKnown RBP13.04□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Cracr2aQ3UP38 310 aa13.04□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Atp6v1e2Q9D593 226 aa13.04□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Apol11aE9PZG0 334 aa13.04□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Becn2P0DM65 447 aa13.04□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Il4rP16382 810 aa13.04□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Trim21Q62191 470 aa13.04□□□□□ -0.32
Scn8a-208ENSMUST00000200963 AticQ9CWJ9 592 aaKnown RBP13.04□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Fam135bQ9DAI6 1403 aa13.04□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Tpx2A2APB8 745 aaKnown RBP13.04□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Capn2O08529 700 aa13.04□□□□□ -0.32
Scn8a-208ENSMUST00000200963 MmeQ61391 750 aa13.04□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Nacc1Q7TSZ8 514 aa13.04□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Tnni3P48787 211 aa13.04□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Q3TYL0 343 aa13.04□□□□□ -0.32
Scn8a-208ENSMUST00000200963 HarsQ61035 509 aa13.04□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Fgd5Q80UZ0 1219 aa13.04□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Lzts2Q91YU6 671 aa13.04□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Sh2b1Q91ZM2 756 aa13.04□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Xpo4Q9ESJ0 1151 aa13.04□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Ccdc85cE9Q6B2 420 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Lrriq3Q14DL3 633 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Clasp2Q8BRT1 1286 aaKnown RBP13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Lamc3Q9R0B6 1581 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Gm45015A0A140LII9 184 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Proca1B0QZF7 307 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Slc12a2P55012 1205 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Bach1P97302 739 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Gm4981Q3ULJ8 291 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Dzip3Q7TPV2 1204 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Trerf1Q8BXJ2 1205 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Plcd3Q8K2J0 785 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Bnip3lQ9Z2F7 218 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Nlrp9aQ66X03 949 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Slc51bQ80WK2 128 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Scyl2Q8CFE4 930 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Nod2Q8K3Z0 1020 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Slc18a1Q8R090 521 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Cyp27a1Q9DBG1 533 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Txnrd1Q9JMH6 613 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Anxa1P10107 346 aaKnown RBP13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Armc2Q3URY6 854 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 EsrrbQ61539 433 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Slc26a7Q8R2Z3 656 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Edc4Q3UJB9 1406 aaKnown RBP13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Fen1P39749 378 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Yars2Q8BYL4 472 aaKnown RBP13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Spata2Q8K004 515 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Saal1Q9D2C2 474 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Stx12Q9ER00 274 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Irx4Q9QY61 515 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Tbc1d4Q8BYJ6 1307 aa13.03□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Rad17Q6NXW6 688 aa13.02□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Camsap3Q80VC9 1252 aa13.02□□□□□ -0.32
Scn8a-208ENSMUST00000200963 C130026I21RikQ8C898 291 aa13.02□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Osbpl5Q9ER64 874 aa13.02□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Spata18Q0P557 537 aa13.02□□□□□ -0.32
Scn8a-208ENSMUST00000200963 CtcfQ61164 736 aaKnown RBP13.02□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Krt9Q6RHW0 743 aa13.02□□□□□ -0.32
Scn8a-208ENSMUST00000200963 H2-OaQ9QWV1 250 aa13.02□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Top2bQ64511 1612 aa13.02□□□□□ -0.33
Scn8a-208ENSMUST00000200963 Gm4297D3YWB7 211 aa13.02□□□□□ -0.33
Scn8a-208ENSMUST00000200963 1700029H14RikE9PY36 240 aa13.02□□□□□ -0.33
Scn8a-208ENSMUST00000200963 Csrnp1P59054 583 aa13.02□□□□□ -0.33
Scn8a-208ENSMUST00000200963 Mybpc2Q5XKE0 1136 aa13.02□□□□□ -0.33
Scn8a-208ENSMUST00000200963 LpxnQ99N69 386 aa13.02□□□□□ -0.33
Scn8a-208ENSMUST00000200963 Golga5Q9QYE6 729 aa13.02□□□□□ -0.33
Scn8a-208ENSMUST00000200963 Kif21aQ9QXL2 1672 aa13.02□□□□□ -0.33
Scn8a-208ENSMUST00000200963 Cyp2j7A0A140T8U1 504 aa13.02□□□□□ -0.33
Scn8a-208ENSMUST00000200963 XpcP51612 930 aa13.02□□□□□ -0.33
Scn8a-208ENSMUST00000200963 Ssfa2Q922B9 1252 aa13.02□□□□□ -0.33
Scn8a-208ENSMUST00000200963 Heatr4E9Q357 955 aa13.01□□□□□ -0.33
Scn8a-208ENSMUST00000200963 Ercc5P35689 1170 aa13.01□□□□□ -0.33
Scn8a-208ENSMUST00000200963 Trip13Q3UA06 432 aa13.01□□□□□ -0.33
Scn8a-208ENSMUST00000200963 ErmnQ5EBJ4 281 aa13.01□□□□□ -0.33
Scn8a-208ENSMUST00000200963 Wdr3Q8BHB4 942 aaKnown RBP13.01□□□□□ -0.33
Scn8a-208ENSMUST00000200963 Riox2Q8CD15 465 aa13.01□□□□□ -0.33
Scn8a-208ENSMUST00000200963 Vps37bQ8R0J7 285 aa13.01□□□□□ -0.33
Scn8a-208ENSMUST00000200963 Gpatch8A2A6A1 1505 aa13.01□□□□□ -0.33
Scn8a-208ENSMUST00000200963 Tsta3P23591 321 aa13.01□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms