RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 Ankrd13aQ80UP5 588 aa10.51□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Ccdc9Q8VC31 543 aaKnown RBP10.51□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Mcoln1Q99J21 580 aa10.51□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Txnrd3Q99MD6 652 aa10.51□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 KarsQ99MN1 595 aaKnown RBP10.51□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Rgs12Q8CGE9 1381 aa10.51□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Ankrd63A2ARS0 390 aa10.5□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Ppp2r3aB2RXC8 1150 aa10.5□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Flvcr1B2RXV4 560 aa10.5□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 B020004C17RikJ3QP07 232 aa10.5□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Mapkapk5O54992 473 aa10.5□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 PtpraP18052 829 aa10.5□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Fdx1P46656 188 aa10.5□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Aak1Q3UHJ0 959 aa10.5□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Garem2Q6PAJ3 880 aa10.5□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Ssh1Q76I79 1042 aa10.5□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Sept9Q80UG5 583 aa10.5□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Smad3Q8BUN5 425 aa10.5□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Shisa4Q8CA71 197 aa10.5□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Phf20l1Q8CCJ9 1013 aa10.5□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Aldh1l1Q8R0Y6 902 aa10.5□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Zcchc14Q8VIG0 956 aa10.5□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 NsmfQ99NF2 532 aa10.5□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Med23Q80YQ2 1367 aa10.5□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Ccdc183A2AJB1 534 aa10.49□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 AlyrefO08583 255 aaKnown RBP10.49□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 FlgP11088 336 aa10.49□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Lamp1P11438 406 aaKnown RBP10.49□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Tbc1d2bQ3U0J8 965 aa10.49□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 GpkowQ56A08 488 aa10.49□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 HellsQ60848 821 aa10.49□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Ppm1gQ61074 542 aa10.49□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Stxbp2Q64324 593 aa10.49□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 MarsQ68FL6 902 aaKnown RBP10.49□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 EngaseQ8BX80 734 aa10.49□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Q8C5S3 137 aa10.49□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Ufl1Q8CCJ3 793 aaKnown RBP10.49□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Plcd4Q8K3R3 807 aa10.49□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Traf7Q922B6 594 aa10.49□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Ppp2r2dQ925E7 453 aa10.49□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Ttyh1Q9D3A9 450 aa10.49□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Ngly1Q9JI78 651 aa10.49□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Bcorl1A2AQH4 1781 aa10.49□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Nup98Q6PFD9 1816 aaKnown RBP10.49□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Ankrd44B2RXR6 993 aa10.48□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 AU019823E9PUQ3 292 aa10.48□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 ChgaP26339 463 aaKnown RBP10.48□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Pax4P32115 349 aa10.48□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Rangap1P46061 589 aaKnown RBP10.48□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Ftl2P49945 183 aa10.48□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Cyp2c38P56655 490 aa10.48□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Zfp953Q3UPV7 304 aa10.48□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Zfp957Q3UT76 567 aa10.48□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Senp6Q6P7W0 1132 aa10.48□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Prr11Q8BHE0 368 aa10.48□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Dpp9Q8BVG4 862 aa10.48□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Adgrg2Q8CJ12 1009 aa10.48□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Atxn7Q8R4I1 867 aa10.48□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Mei1Q9D4I2 1268 aa10.48□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 MvpQ9EQK5 861 aa10.48□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 LratQ9JI60 231 aa10.48□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Disp2Q8CIP5 1345 aa10.48□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Gm6268A2A3U9 297 aa10.47□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Gm3893E9Q1I1 302 aa10.47□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Tmigd3G3X8R9 209 aa10.47□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Grm8P47743 908 aa10.47□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Plekhf1Q3TB82 279 aa10.47□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Plbd2Q3TCN2 594 aa10.47□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Palb2Q3U0P1 1104 aa10.47□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Lamc2Q61092 1191 aa10.47□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Sv2cQ69ZS6 727 aa10.47□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Cypt4Q6P925 153 aa10.47□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Dcaf15Q6PFH3 600 aa10.47□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Ipo8Q7TMY7 1010 aa10.47□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 PhkbQ7TSH2 1085 aa10.47□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Mboat7Q8CHK3 473 aa10.47□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Uba5Q8VE47 403 aa10.47□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Ak7Q9D2H2 614 aa10.47□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 RabggtaQ9JHK4 567 aa10.47□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Aox4Q3TYQ9 1336 aa10.47□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Phlpp2Q8BXA7 1320 aa10.47□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Atrnl1Q6A051 1378 aa10.47□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Cep295Q8BQ48 2412 aa10.47□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 AV320801A2AWL3 467 aa10.46□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Palm3A2TJV2 734 aa10.46□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Prl3d2F6R3P9 224 aa10.46□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Ccl26F8VQM2 93 aa10.46□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Gm3138K7N754 218 aa10.46□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Gm15023L7MUB4 467 aa10.46□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 MyocO70624 490 aa10.46□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Nectin2P32507 530 aa10.46□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Morf4l1P60762 362 aa10.46□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Rnf157Q3TEL6 685 aa10.46□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Babam1Q3UI43 333 aa10.46□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 NntQ61941 1086 aaKnown RBP10.46□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Cyp2c29Q64458 490 aa10.46□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Znf280dQ68FE8 974 aa10.46□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Fndc3bQ6NWW9 1207 aaKnown RBP10.46□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Bend3Q6PAL0 825 aa10.46□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Zkscan8Q8BSL0 588 aa10.46□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms