RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Gja10Q9WUS4 505 aa15.52■□□□□ 0.08
Pcdha1-202ENSMUST00000193839 Gm4758L7N258 96 aa15.52■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Ttll12Q3UDE2 639 aa15.52■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Kiaa0319Q5SZV5 1081 aa15.52■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 GnptabQ69ZN6 1235 aa15.52■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Ccdc148Q6P5U8 527 aa15.52■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Gm28919A0A087WP35 240 aa15.51■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Gbp1Q01514 589 aa15.51■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Map3k11Q80XI6 850 aa15.51■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Ccdc105Q9D4K7 499 aa15.51■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Bcl9Q9D219 1425 aa15.51■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Pde5aQ8CG03 865 aa15.51■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 NapaQ9DB05 295 aa15.51■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 IghaA0A0A6YXW6 389 aa15.51■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Fam178bQ24JP3 464 aa15.51■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Fam228bQ497Q6 232 aa15.51■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Nyap1Q6PFX7 833 aa15.51■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Kdm1aQ6ZQ88 853 aa15.51■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Mrps25Q9D125 171 aaKnown RBP15.51■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Shtn1Q8K2Q9 631 aa15.51■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 McamQ8R2Y2 648 aaKnown RBP15.51■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Rbm33Q9CXK9 1231 aaKnown RBP15.51■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Lonrf3Q9D4H7 753 aa15.51■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Zfp597E9Q6S0 419 aa15.5■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Gm10378F6XQQ1 160 aa15.5■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Tshz1Q5DTH5 1084 aa15.5■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Pkp1P97350 728 aaKnown RBP15.5■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 MpndQ3TV65 487 aa15.5■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Dclk3Q8BWQ5 790 aa15.5■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Skor1Q8BX46 964 aa15.5■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Plagl1Q9JLQ4 704 aa15.5■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 QarsQ8BML9 775 aa15.5■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Zfp202Q8C879 641 aa15.5■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Slc4a8Q8JZR6 1089 aa15.5■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Atp12aQ9Z1W8 1035 aa15.5■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Fermt2Q8CIB5 680 aa15.5■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Kcnj14Q8JZN3 434 aa15.5■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Add2Q9QYB8 725 aa15.5■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Znf568E9PYI1 671 aa15.49■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Srp68Q8BMA6 625 aaKnown RBP15.49■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Kif17Q99PW8 1038 aa15.49■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Spocd1B1ASB6 936 aa15.49■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Krt18P05784 423 aa15.49■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Arhgap33Q80YF9 1305 aa15.49■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Sp4Q62445 782 aa15.49■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Maip1Q8BHE8 291 aa15.49■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Iffo1Q8BXL9 562 aa15.49■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 HdlbpQ8VDJ3 1268 aaKnown RBP15.49■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Dpp7Q9ET22 506 aa15.49■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Gm3409A0A0G2JE67 319 aa15.49■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Kifap3P70188 793 aa15.49■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Krt15Q61414 452 aa15.49■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Zscan22Q8BGS5 496 aa15.49■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Tmem179Q8BHH9 233 aa15.49■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Cep128Q8BI22 1102 aa15.49■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Rassf2Q8BMS9 326 aa15.48■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Znf428Q8C1M2 176 aa15.48■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Pym1Q8CHP5 203 aaKnown RBP15.48■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Tfcp2Q9ERA0 502 aa15.48■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Eddm13E9Q7F5 164 aa15.48■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Rnf216P58283 853 aa15.48■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Armc2Q3URY6 854 aa15.48■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Nlrp9bQ66X22 1003 aa15.48■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Polr2dQ9D7M8 142 aaKnown RBP15.48■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Stmn4P63042 189 aa15.48■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Fam83bQ0VBM2 1012 aa15.48■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Gbp8Q2V6D6 525 aa15.48■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Hdhd2Q3UGR5 259 aa15.48■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Gas8Q60779 478 aa15.48■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Emilin1Q99K41 1017 aa15.48■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 4930548H24RikQ9D496 437 aa15.48■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Zc3h13E9Q784 1729 aaKnown RBP15.48■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Glt1d1A4FUP9 346 aa15.48■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Svs3aF2Z472 265 aa15.48■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Ebag9Q9D0V7 213 aa15.48■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Ltb4r2Q9JJL9 360 aa15.48■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Tmem131lQ3U3D7 1597 aa15.47■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Lipo1J3QME6 396 aa15.47■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Tnnc1P19123 161 aa15.47■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Pls1Q3V0K9 630 aa15.47■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Ankrd40Q5SUE8 363 aa15.47■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Exoc3Q6KAR6 755 aa15.47■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Cyp4f39Q8BGU0 532 aa15.47■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Ppm1mQ8BU27 406 aa15.47■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Mnat1P51949 309 aa15.47■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Ints5Q8CHT3 1018 aa15.47■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Kcnq5Q9JK45 933 aa15.47■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Nlrp5Q9R1M5 1163 aa15.47■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Tagap1P0CAX8 505 aa15.47■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Rpl13P47963 211 aaKnown RBP15.47■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Sh3bp1P55194 680 aa15.47■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Specc1lQ2KN98 1118 aaKnown RBP15.47■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Ccdc157Q5SPX1 718 aa15.47■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Igbp1Q61249 340 aa15.47■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Fgfr1opQ66JX5 399 aa15.47■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Lrrd1Q8C0R9 853 aa15.47■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Gramd4Q8CB44 633 aa15.47■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Themis2Q91YX0 663 aa15.47■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Elf2Q9JHC9 593 aa15.47■□□□□ 0.07
Pcdha1-202ENSMUST00000193839 Rbm15bQ6PHZ5 887 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 51.2 ms