RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Cep135Q6P5D4 1140 aa15.43■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Mrps25Q9D125 171 aaKnown RBP15.43■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Myh6Q02566 1938 aaKnown RBP15.43■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Ambra1A2AH22 1300 aa15.42■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Stx8O88983 236 aa15.42■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Slu7Q8BHJ9 585 aa15.42■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Larp6Q8BN59 492 aa15.42■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Tbc1d23Q8K0F1 684 aa15.42■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Golph3lQ8R088 285 aaKnown RBP15.42■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Dusp10Q9ESS0 483 aa15.42■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Stk39Q9Z1W9 556 aa15.42■□□□□ 0.06
Rnf4-204ENSMUST00000182047 StrcQ8VIM6 1809 aa15.42■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Adamtsl1Q8BLI0 1745 aa15.42■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Gm45140A0A0N4SUM8 220 aa15.42■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Gas1Q01721 343 aa15.42■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Epha2Q03145 977 aa15.42■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Kcnk13Q8R1P5 405 aa15.42■□□□□ 0.06
Rnf4-204ENSMUST00000182047 ParnQ8VDG3 624 aa15.42■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Cep89Q9CZX2 791 aa15.42■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Nfatc2ipO09130 412 aa15.41■□□□□ 0.06
Rnf4-204ENSMUST00000182047 PcQ05920 1178 aa15.41■□□□□ 0.06
Rnf4-204ENSMUST00000182047 L1td1Q587J6 782 aaKnown RBP15.41■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Ube2oQ6ZPJ3 1288 aa15.41■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Zfp397Q7TNK4 527 aa15.41■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Stk38Q91VJ4 465 aa15.41■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Tfcp2Q9ERA0 502 aa15.41■□□□□ 0.06
Rnf4-204ENSMUST00000182047 RabggtaQ9JHK4 567 aa15.41■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Scn9aQ62205 1984 aa15.41■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Zscan29E9Q5B4 869 aa15.41■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Grem2O88273 168 aa15.41■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Cdk4P30285 303 aa15.41■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Taf3Q5HZG4 932 aa15.41■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Tekt3Q6X6Z7 490 aa15.41■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Lrrc8aQ80WG5 810 aa15.41■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Gpatch3Q8BIY1 525 aa15.41■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Rbm19Q8R3C6 952 aaKnown RBP15.41■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Ubxn4Q8VCH8 506 aa15.41■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Nup188Q6ZQH8 1759 aa15.41■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Ppp4cP97470 307 aa15.4■□□□□ 0.06
Rnf4-204ENSMUST00000182047 AsnsQ61024 561 aa15.4■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Rbm28Q8CGC6 750 aaKnown RBP15.4■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Txnrd3Q99MD6 652 aa15.4■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Snw1Q9CSN1 536 aaKnown RBP15.4■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Myoz2Q9JJW5 264 aa15.4■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Cyp2ab1S4R196 498 aa15.4■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Ano3A2AHL1 981 aa15.4■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Ccdc85cE9Q6B2 420 aa15.4■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Hmgb2P30681 210 aaKnown RBP15.4■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Rc3h1Q4VGL6 1130 aaKnown RBP15.4■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Tbc1d5Q80XQ2 815 aa15.4■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Znf18Q810A1 556 aa15.4■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Dnaaf2Q8BPI1 814 aa15.4■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Peak1Q69Z38 1735 aa15.4■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Prpf38aQ4FK66 312 aaKnown RBP15.4■□□□□ 0.06
Rnf4-204ENSMUST00000182047 CtifQ6PEE2 600 aaKnown RBP15.4■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Csf1rP09581 977 aa15.39■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Gm28047Q3US59 414 aa15.39■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Ano10Q8BH79 659 aa15.39■□□□□ 0.05
Rnf4-204ENSMUST00000182047 WaslQ91YD9 501 aa15.39■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Tsc2Q61037 1814 aa15.39■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Dock5B2RY04 1868 aa15.39■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Stx1aO35526 288 aa15.39■□□□□ 0.05
Rnf4-204ENSMUST00000182047 DnttP09838 530 aa15.39■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Sptlc2P97363 560 aaKnown RBP15.39■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Znf667Q2TL60 609 aa15.39■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Tmem109Q3UBX0 243 aa15.39■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Ces3aQ63880 571 aa15.39■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Ces3bQ8VCU1 571 aa15.39■□□□□ 0.05
Rnf4-204ENSMUST00000182047 HibadhQ99L13 335 aaKnown RBP15.39■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Usp17lbE9Q9U0 468 aa15.38■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Dync1i1O88485 628 aa15.38■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Gpr101Q80T62 511 aa15.38■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Srek1Q8BZX4 494 aaKnown RBP15.38■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Rcan1Q9JHG6 198 aa15.38■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Mtmr2Q9Z2D1 643 aa15.38■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Klhl34A2AI76 644 aa15.38■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Il7P10168 154 aa15.38■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Zkscan4Q5SZT6 480 aa15.38■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Plekhg2Q6KAU7 1340 aa15.38■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Zmym2Q9CU65 1376 aa15.38■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Zscan20B2KFW1 1030 aa15.37■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Clec11aO88200 328 aa15.37■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Fam89aQ14BJ1 175 aa15.37■□□□□ 0.05
Rnf4-204ENSMUST00000182047 VrtnQ3SYK4 740 aa15.37■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Slc27a1Q60714 646 aa15.37■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Lrrc15Q80X72 579 aa15.37■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Tbc1d8bA3KGB4 1114 aa15.37■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Fxr1Q61584 677 aaKnown RBP15.37■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Vps37dQ810I0 261 aa15.37■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Ehd2Q8BH64 543 aa15.37■□□□□ 0.05
Rnf4-204ENSMUST00000182047 DlatQ8BMF4 642 aa15.37■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Triml1Q8BVP1 470 aa15.37■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Pcdhb5Q91XZ5 792 aa15.37■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Igsf9bE9PZ19 1328 aa15.37■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Stag2O35638 1231 aa15.37■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Myo1bP46735 1107 aa15.37■□□□□ 0.05
Rnf4-204ENSMUST00000182047 MycbpapQ5SUV2 932 aa15.37■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Tm4sf1Q64302 202 aa15.37■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Dhx40Q6PE54 779 aaKnown RBP15.37■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Ccp110Q7TSH4 1004 aa15.37■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 39.8 ms