RNA–Protein interactions for RNA: ENSMUST00000159337.7

Vcan-205, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 2,273 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-205ENSMUST00000159337 Rtn1Q8K0T0 780 aa16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 Thap2Q9D305 217 aa16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 Sept12Q9D451 317 aa16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 Lrrc6O88978 473 aa16.61■□□□□ 0.25
Vcan-205ENSMUST00000159337 Nkx2-5P42582 318 aa16.61■□□□□ 0.25
Vcan-205ENSMUST00000159337 Olfr121Q5CZY0 321 aa16.61■□□□□ 0.25
Vcan-205ENSMUST00000159337 Ctr9Q62018 1173 aaKnown RBP16.61■□□□□ 0.25
Vcan-205ENSMUST00000159337 Hps6Q8BLY7 805 aa16.61■□□□□ 0.25
Vcan-205ENSMUST00000159337 Paf1Q8K2T8 535 aa16.61■□□□□ 0.25
Vcan-205ENSMUST00000159337 Eaf2Q91ZD6 262 aa16.61■□□□□ 0.25
Vcan-205ENSMUST00000159337 Riok1Q922Q2 567 aa16.61■□□□□ 0.25
Vcan-205ENSMUST00000159337 Tab2Q99K90 693 aa16.61■□□□□ 0.25
Vcan-205ENSMUST00000159337 Tnrc6cQ3UHC0 1690 aaKnown RBP16.61■□□□□ 0.25
Vcan-205ENSMUST00000159337 Kifc2O08672 792 aa16.61■□□□□ 0.25
Vcan-205ENSMUST00000159337 Vipas39Q8BGQ1 491 aa16.61■□□□□ 0.25
Vcan-205ENSMUST00000159337 Vps16Q920Q4 839 aa16.61■□□□□ 0.25
Vcan-205ENSMUST00000159337 Etnk1Q9D4V0 363 aa16.61■□□□□ 0.25
Vcan-205ENSMUST00000159337 Ecm29Q6PDI5 1840 aa16.6■□□□□ 0.25
Vcan-205ENSMUST00000159337 Zfand4D3Z3C6 739 aa16.6■□□□□ 0.25
Vcan-205ENSMUST00000159337 Glis3Q6XP49 780 aa16.6■□□□□ 0.25
Vcan-205ENSMUST00000159337 Ccdc93Q7TQK5 629 aa16.6■□□□□ 0.25
Vcan-205ENSMUST00000159337 Larp6Q8BN59 492 aa16.6■□□□□ 0.25
Vcan-205ENSMUST00000159337 Vmn1r218Q8R261 298 aa16.6■□□□□ 0.25
Vcan-205ENSMUST00000159337 Ribc1Q9D0B8 379 aa16.6■□□□□ 0.25
Vcan-205ENSMUST00000159337 Cnpy3Q9DAU1 276 aa16.6■□□□□ 0.25
Vcan-205ENSMUST00000159337 Egfl6Q9JJZ5 550 aa16.6■□□□□ 0.25
Vcan-205ENSMUST00000159337 Suclg2Q9Z2I8 433 aa16.6■□□□□ 0.25
Vcan-205ENSMUST00000159337 Scgb2b18A0A087WPA9 112 aa16.59■□□□□ 0.25
Vcan-205ENSMUST00000159337 IkbkbO88351 757 aa16.59■□□□□ 0.25
Vcan-205ENSMUST00000159337 Prl3d1P18121 224 aa16.59■□□□□ 0.25
Vcan-205ENSMUST00000159337 Gpr182P43142 395 aa16.59■□□□□ 0.25
Vcan-205ENSMUST00000159337 Kifap3P70188 793 aa16.59■□□□□ 0.25
Vcan-205ENSMUST00000159337 Sash3Q8K352 380 aa16.59■□□□□ 0.25
Vcan-205ENSMUST00000159337 Uso1Q9Z1Z0 959 aaKnown RBP16.59■□□□□ 0.25
Vcan-205ENSMUST00000159337 Gm42641I6L9G2 585 aa16.59■□□□□ 0.25
Vcan-205ENSMUST00000159337 PparaP23204 468 aa16.59■□□□□ 0.25
Vcan-205ENSMUST00000159337 AtripQ8BMG1 785 aa16.59■□□□□ 0.25
Vcan-205ENSMUST00000159337 Zc3h6Q8BYK8 1177 aa16.59■□□□□ 0.25
Vcan-205ENSMUST00000159337 Lrrd1Q8C0R9 853 aa16.59■□□□□ 0.25
Vcan-205ENSMUST00000159337 AdarQ99MU3 1178 aaKnown RBP16.59■□□□□ 0.25
Vcan-205ENSMUST00000159337 Pdcd6ipQ9WU78 869 aaKnown RBP16.59■□□□□ 0.25
Vcan-205ENSMUST00000159337 Ppp2r3dQ9Z176 491 aa16.59■□□□□ 0.25
Vcan-205ENSMUST00000159337 Stk39Q9Z1W9 556 aa16.59■□□□□ 0.25
Vcan-205ENSMUST00000159337 Col20a1Q923P0 1320 aa16.59■□□□□ 0.25
Vcan-205ENSMUST00000159337 Tbc1d8bA3KGB4 1114 aa16.58■□□□□ 0.25
Vcan-205ENSMUST00000159337 LtbrP50284 415 aa16.58■□□□□ 0.25
Vcan-205ENSMUST00000159337 Cnnm2Q3TWN3 875 aa16.58■□□□□ 0.25
Vcan-205ENSMUST00000159337 Clca2Q8BG22 942 aa16.58■□□□□ 0.25
Vcan-205ENSMUST00000159337 Apol10aQ8CCA5 318 aa16.58■□□□□ 0.25
Vcan-205ENSMUST00000159337 RarsQ9D0I9 660 aaKnown RBP16.58■□□□□ 0.25
Vcan-205ENSMUST00000159337 Ulk4Q3V129 1303 aa16.58■□□□□ 0.25
Vcan-205ENSMUST00000159337 Cnbd1B1AWM0 430 aa16.58■□□□□ 0.24
Vcan-205ENSMUST00000159337 Anxa1P10107 346 aaKnown RBP16.58■□□□□ 0.24
Vcan-205ENSMUST00000159337 Lrrn2Q6PHP6 730 aa16.58■□□□□ 0.24
Vcan-205ENSMUST00000159337 Epn1Q80VP1 575 aa16.58■□□□□ 0.24
Vcan-205ENSMUST00000159337 Phc3Q8CHP6 981 aa16.58■□□□□ 0.24
Vcan-205ENSMUST00000159337 Prpf6Q91YR7 941 aaKnown RBP16.58■□□□□ 0.24
Vcan-205ENSMUST00000159337 Coro7Q9D2V7 922 aa16.58■□□□□ 0.24
Vcan-205ENSMUST00000159337 Hsd3b7Q9EQC1 369 aa16.58■□□□□ 0.24
Vcan-205ENSMUST00000159337 Rnf40Q3U319 1001 aa16.57■□□□□ 0.24
Vcan-205ENSMUST00000159337 Exoc8Q6PGF7 716 aa16.57■□□□□ 0.24
Vcan-205ENSMUST00000159337 Fam217aQ9D9W6 419 aa16.57■□□□□ 0.24
Vcan-205ENSMUST00000159337 Myh13B1AR69 1938 aa16.57■□□□□ 0.24
Vcan-205ENSMUST00000159337 Kif23E9Q5G3 953 aa16.57■□□□□ 0.24
Vcan-205ENSMUST00000159337 Tpp1O89023 562 aa16.57■□□□□ 0.24
Vcan-205ENSMUST00000159337 Top1Q04750 767 aaKnown RBP16.57■□□□□ 0.24
Vcan-205ENSMUST00000159337 Fam89aQ14BJ1 175 aa16.57■□□□□ 0.24
Vcan-205ENSMUST00000159337 Slc27a1Q60714 646 aa16.57■□□□□ 0.24
Vcan-205ENSMUST00000159337 Kcna6Q61923 529 aa16.57■□□□□ 0.24
Vcan-205ENSMUST00000159337 Cfap69Q8BH53 942 aa16.57■□□□□ 0.24
Vcan-205ENSMUST00000159337 Caps2Q8BUG5 550 aa16.57■□□□□ 0.24
Vcan-205ENSMUST00000159337 Ints5Q8CHT3 1018 aa16.57■□□□□ 0.24
Vcan-205ENSMUST00000159337 Ces1dQ8VCT4 565 aa16.57■□□□□ 0.24
Vcan-205ENSMUST00000159337 Txndc5Q91W90 417 aa16.57■□□□□ 0.24
Vcan-205ENSMUST00000159337 Speer4bQ9D9F7 267 aa16.57■□□□□ 0.24
Vcan-205ENSMUST00000159337 Abhd2Q9QXM0 425 aa16.57■□□□□ 0.24
Vcan-205ENSMUST00000159337 Dnajc21E9Q8D0 531 aa16.56■□□□□ 0.24
Vcan-205ENSMUST00000159337 Phldb3E9QAF4 648 aa16.56■□□□□ 0.24
Vcan-205ENSMUST00000159337 GpiP06745 558 aaKnown RBP16.56■□□□□ 0.24
Vcan-205ENSMUST00000159337 NapbP28663 298 aa16.56■□□□□ 0.24
Vcan-205ENSMUST00000159337 Igflr1Q3U4N7 345 aa16.56■□□□□ 0.24
Vcan-205ENSMUST00000159337 CtcfQ61164 736 aaKnown RBP16.56■□□□□ 0.24
Vcan-205ENSMUST00000159337 Adam6bQ6IMH7 756 aa16.56■□□□□ 0.24
Vcan-205ENSMUST00000159337 Smarca1Q6PGB8 1046 aa16.56■□□□□ 0.24
Vcan-205ENSMUST00000159337 Sptlc3Q8BG54 563 aa16.56■□□□□ 0.24
Vcan-205ENSMUST00000159337 Farp2Q91VS8 1065 aa16.56■□□□□ 0.24
Vcan-205ENSMUST00000159337 Lmbr1Q9JIT0 490 aa16.56■□□□□ 0.24
Vcan-205ENSMUST00000159337 Ppfia4B8QI36 1187 aa16.56■□□□□ 0.24
Vcan-205ENSMUST00000159337 Psmd14O35593 310 aa16.56■□□□□ 0.24
Vcan-205ENSMUST00000159337 Sept1P42209 366 aa16.56■□□□□ 0.24
Vcan-205ENSMUST00000159337 Cyp4x1Q6A152 507 aa16.56■□□□□ 0.24
Vcan-205ENSMUST00000159337 Sdad1Q80UZ2 687 aaKnown RBP16.56■□□□□ 0.24
Vcan-205ENSMUST00000159337 Cep85Q8BMK0 761 aa16.56■□□□□ 0.24
Vcan-205ENSMUST00000159337 Chaf1aQ9QWF0 911 aa16.56■□□□□ 0.24
Vcan-205ENSMUST00000159337 GdaQ9R111 454 aa16.56■□□□□ 0.24
Vcan-205ENSMUST00000159337 Uchl5Q9WUP7 329 aa16.56■□□□□ 0.24
Vcan-205ENSMUST00000159337 MetP16056 1379 aa16.55■□□□□ 0.24
Vcan-205ENSMUST00000159337 Cyp2j7A0A140T8U1 504 aa16.55■□□□□ 0.24
Vcan-205ENSMUST00000159337 Foxn2E9Q7L6 429 aa16.55■□□□□ 0.24
Vcan-205ENSMUST00000159337 Plekha7Q3UIL6 1118 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms