RNA–Protein interactions for RNA: ENSMUST00000145482.7

Prpf40b-212, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,308 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-212ENSMUST00000145482 Tpm3-rs7D3Z2H9 248 aa18.37■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Tpcn2Q8BWC0 731 aa18.37■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Dnai2A2AC93 623 aa18.36■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 HrQ61645 1182 aa18.36■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Cyp7a1Q64505 503 aa18.36■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Luc7l2Q7TNC4 392 aaKnown RBP18.36■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Srp68Q8BMA6 625 aaKnown RBP18.36■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Ankk1Q8BZ25 745 aa18.36■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Srgap2Q91Z67 1071 aa18.36■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Saal1Q9D2C2 474 aa18.36■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 TnksQ6PFX9 1320 aa18.36■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Rsrc2A2RTL5 376 aaKnown RBP18.36■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Lipo1J3QME6 396 aa18.36■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Ncaph2Q8BSP2 607 aa18.36■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Tgs1Q923W1 853 aa18.36■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Coro7Q9D2V7 922 aa18.36■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Pik3ap1Q9EQ32 811 aa18.36■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Kirrel3Q8BR86 778 aa18.36■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Yeats4Q9CR11 227 aaKnown RBP18.36■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Zcrb1Q9CZ96 217 aaKnown RBP18.36■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Tnip1Q9WUU8 647 aa18.36■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Marf1Q8BJ34 1730 aaKnown RBP18.35■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Kiaa0319Q5SZV5 1081 aa18.35■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Shisa4Q8CA71 197 aa18.35■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Tcp11l2Q8K1H7 517 aa18.35■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Rab3il1Q8VDV3 383 aa18.35■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 SufuQ9Z0P7 484 aa18.35■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Cops6O88545 324 aa18.35■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Abl1P00520 1123 aa18.35■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Ccdc114Q3UX62 658 aa18.35■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Zfp446Q8C9M8 523 aa18.35■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Ccdc186Q8C9S4 917 aa18.35■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Osbpl1aQ91XL9 950 aa18.35■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Cbx6Q9DBY5 414 aa18.35■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Rps6ka4Q9Z2B9 773 aa18.35■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Cyp19a1P28649 503 aa18.34■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Cep63Q3UPP8 700 aa18.34■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Q8C1R3 189 aa18.34■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Mapk8ip1Q9WVI9 707 aa18.34■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Ces1hD3Z298 562 aa18.34■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Rnaseh1O70338 285 aa18.34■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Smc4Q8CG47 1286 aa18.34■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Trim34aQ99PP6 485 aa18.34■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Vstm4T1NXB5 319 aa18.34■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Myo1bP46735 1107 aa18.34■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Mrps31Q61733 384 aaKnown RBP18.34■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Nwd2Q6P5U7 1742 aa18.33■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Slurp2P0DP59 97 aa18.33■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Tlr8P58682 1032 aa18.33■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Ankrd13dQ6PD24 605 aa18.33■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Clca2Q8BG22 942 aa18.33■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Krt222Q8CCX5 294 aa18.33■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 PdhbQ9D051 359 aa18.33■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Popdc2Q9ES82 367 aa18.33■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 CenphQ9QYM8 241 aa18.33■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Mast2Q60592 1734 aa18.33■□□□□ 0.53
Prpf40b-212ENSMUST00000145482 Gm20425E9Q035 978 aaKnown RBP18.33■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 SrprbP47758 269 aa18.33■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Sun3Q5SS91 320 aa18.33■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 9230110C19RikQ8CC70 267 aa18.33■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Atp6v1aP50516 617 aaKnown RBP18.33■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Eif3cQ8R1B4 911 aaKnown RBP18.33■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Tfcp2Q9ERA0 502 aa18.33■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Ubr2Q6WKZ8 1755 aa18.32■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Dnajc21E9Q8D0 531 aa18.32■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Cdc23Q8BGZ4 597 aa18.32■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Susd4Q8BH32 490 aa18.32■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Hgh1Q8C3I8 393 aa18.32■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Prl3d3A0A0M6L0J6 224 aa18.32■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Il7P10168 154 aa18.32■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Rad23aP54726 363 aa18.32■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 GalcP54818 684 aa18.32■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Irx1P81068 480 aa18.32■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Ccdc33Q3ULW6 985 aa18.32■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Tubb4aQ9D6F9 444 aa18.32■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Fut8Q9WTS2 575 aa18.32■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Sos2Q02384 1333 aa18.32■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Ppfia4B8QI36 1187 aa18.31■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Mis18aQ9CZJ6 204 aa18.31■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Ccne2Q9Z238 404 aa18.31■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Shank2Q80Z38 1476 aa18.31■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 IkbkbO88351 757 aa18.31■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Pth1rP41593 591 aa18.31■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Atp1b3P97370 278 aa18.31■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Gja3Q64448 417 aa18.31■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Ccdc40Q8BI79 1192 aa18.31■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Sycp2lA0A0M3U1B0 842 aa18.31■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Hnrnph1O35737 449 aaKnown RBP18.31■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Pla2g4aP47713 748 aa18.31■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Mcm5P49718 733 aa18.31■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Tmx4Q8C0L0 335 aa18.31■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Klhl10Q9D5V2 608 aa18.31■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Fer1l6E0CZ42 1862 aa18.3■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Akap2O54931 893 aa18.3■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Slc4a1P04919 929 aa18.3■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Tnni2P13412 182 aa18.3■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Kiaa0319lQ8K135 1048 aa18.3■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Emilin1Q99K41 1017 aa18.3■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Telo2Q9DC40 840 aaKnown RBP18.3■□□□□ 0.52
Prpf40b-212ENSMUST00000145482 Hnrnph2P70333 449 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms