RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Myl3P09542 204 aa24.61■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Cacnb3P54285 484 aa24.61■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Llgl2Q3TJ91 1027 aa24.61■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 LrmpQ60664 539 aa24.61■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Ccdc82Q6PG04 518 aa24.61■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Nap1l3Q794H2 544 aa24.61■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Ascc2Q91WR3 749 aa24.61■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Tmem79Q9D709 391 aa24.61■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Igf2rQ07113 2483 aaKnown RBP24.61■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Bcorl1A2AQH4 1781 aa24.61■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Cfap99A0A140LIX9 648 aa24.61■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 A0A1W2P6Q8 802 aa24.61■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Gm9048A0A1W2P7H4 802 aa24.61■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 A0A1W2P7Z8 802 aa24.61■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Gm9046A0A1W2P855 802 aa24.61■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Ptpn12P35831 775 aa24.61■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Lins1Q3U1D0 764 aa24.61■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 MyrflQ3UN70 904 aa24.61■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Cnot7Q60809 285 aa24.61■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Pip5kl1Q6U7H8 395 aa24.61■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Kif1bpQ6ZPU9 617 aa24.61■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Tbc1d5Q80XQ2 815 aa24.61■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Lbhd1A0A087WPA0 259 aa24.6■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Stx8O88983 236 aa24.6■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Scg2Q03517 617 aa24.6■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 LdhdQ7TNG8 484 aa24.6■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 KhnynQ80U38 671 aa24.6■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Shtn1Q8K2Q9 631 aa24.6■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Clstn1Q9EPL2 979 aa24.6■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Wnt10bP48614 389 aa24.59■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Babam1Q3UI43 333 aa24.59■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Rc3h1Q4VGL6 1130 aaKnown RBP24.59■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Scaf8Q6DID3 1268 aa24.59■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Slitrk3Q810B9 980 aa24.59■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Zfp317Q8C0Q5 607 aa24.59■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Kbtbd13Q8C828 458 aa24.59■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Myt1Q8CFC2 1127 aa24.59■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 NrapQ80XB4 1728 aa24.59■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Zscan18E9PUD6 809 aa24.58■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Hsp90aa1P07901 733 aaKnown RBP24.58■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Gadd45bP22339 160 aa24.58■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Scnn1aQ61180 699 aa24.58■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Ifit1Q64282 463 aa24.58■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Usp50Q6P8X6 390 aa24.58■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Tmc4Q7TQ65 694 aa24.58■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Trappc12Q8K2L8 797 aa24.58■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Wasf1Q8R5H6 559 aa24.58■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 SdsQ8VBT2 327 aa24.58■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Lrrc2Q8VDB8 371 aa24.58■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Srgap1Q91Z69 1062 aa24.58■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Tgm5Q9D7I9 724 aa24.58■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 1700003F12RikA2AKE5 210 aa24.58■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Slc27a3O88561 667 aa24.58■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Mcm4P49717 862 aa24.58■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Ubash3aQ3V3E1 624 aa24.58■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Gimap7Q8R379 293 aa24.58■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 UtrnE9Q6R7 3430 aa24.57■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 PaoxQ8C0L6 504 aa24.57■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Cep89Q9CZX2 791 aa24.57■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Akap8Q9DBR0 687 aaKnown RBP24.57■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Igbp1bQ9QZ29 343 aa24.57■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Flvcr1B2RXV4 560 aa24.56■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 ImpactO55091 318 aa24.56■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Gxylt1Q3UHH8 404 aa24.56■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 OplahQ8K010 1288 aa24.56■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Pappa2E9PZ87 1789 aa24.56■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Cnnm3Q32NY4 713 aa24.55■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Oog3Q3UWY1 500 aa24.55■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Plcd1Q8R3B1 756 aa24.55■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Mad2l2Q9D752 211 aa24.55■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 TicrrQ8BQ33 1889 aa24.55■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Col2a1P28481 1487 aa24.55■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Tbc1d8bA3KGB4 1114 aa24.55■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Zscan20B2KFW1 1030 aa24.55■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 CnpP16330 420 aa24.55■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Esyt1Q3U7R1 1092 aaKnown RBP24.55■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Rbm28Q8CGC6 750 aaKnown RBP24.55■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Eif4enif1Q9EST3 983 aaKnown RBP24.55■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 LeprP48356 1162 aa24.54■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Usp5P56399 858 aaKnown RBP24.54■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 1700013D24RikQ0P521 120 aa24.54■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Tacc1Q6Y685 774 aa24.54■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Glipr1l2Q9CQ35 332 aa24.54■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Tmem47Q9JJG6 181 aa24.54■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Stk39Q9Z1W9 556 aa24.54■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Klrc1Q9Z202 244 aa24.54■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Evc2Q8K1G2 1220 aa24.53■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Lman1lQ8VCD3 505 aa24.53■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Ubxn2aQ99KJ0 258 aa24.53■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Styxl1Q9DAR2 321 aa24.53■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Dpp8Q80YA7 892 aa24.52■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Ccdc178Q8CDV0 866 aa24.52■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Ubac1Q8VDI7 409 aa24.52■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Borcs6Q9D6W8 360 aa24.52■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Krt85Q9Z2T6 507 aa24.52■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Myo1bP46735 1107 aa24.52■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Ccp110Q7TSH4 1004 aa24.52■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 CerkQ8K4Q7 531 aa24.52■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Atxn7Q8R4I1 867 aa24.52■■□□□ 1.52
Ccdc88a-202ENSMUST00000109477 Myh8P13542 1937 aa24.52■■□□□ 1.52
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms