RNA–Protein interactions for RNA: ENSMUST00000108856.8

Col20a1-201, Transcript of Collagen alpha-1(XX) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col20a1, Length 4,489 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1-201ENSMUST00000108856 Tacc2Q9JJG0 1149 aa12.52□□□□□ -0.4
Col20a1-201ENSMUST00000108856 Hmgb1P63158 215 aaKnown RBP12.52□□□□□ -0.4
Col20a1-201ENSMUST00000108856 Ptpn23Q6PB44 1692 aa12.52□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Zfpm1O35615 995 aa12.52□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Trak2Q6P9N8 913 aa12.52□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Lonp2Q9DBN5 852 aa12.52□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Mcm7Q61881 719 aaKnown RBP12.52□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Pde5aQ8CG03 865 aa12.52□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Pdia6Q922R8 440 aaKnown RBP12.52□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Cetn2Q9R1K9 172 aa12.52□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Chd2E9PZM4 1827 aaKnown RBP12.52□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Gm28919A0A087WP35 240 aa12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 AW822073A0A0N4SUK1 652 aa12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Kdm1aQ6ZQ88 853 aa12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Asap2Q7SIG6 958 aa12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Nxf7Q80SZ6 620 aaKnown RBP12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Wdr3Q8BHB4 942 aaKnown RBP12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Olr1Q9EQ09 363 aa12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Add2Q9QYB8 725 aa12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Ubr1O70481 1757 aa12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 C3P01027 1663 aa12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 PparaP23204 468 aa12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Rnf216P58283 853 aa12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Pfkfb1P70266 471 aa12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Gas8Q60779 478 aa12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Ces5aQ6AW46 575 aa12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Ttc27Q8CD92 847 aa12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Npc1l1Q6T3U4 1333 aa12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Slit2Q9R1B9 1521 aa12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Cyp2j7A0A140T8U1 504 aa12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 CalrP14211 416 aaKnown RBP12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Nkx2-3P97334 362 aa12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Krt15Q61414 452 aa12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Cyp24a1Q64441 514 aa12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Snd1Q78PY7 910 aaKnown RBP12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Grm1P97772 1199 aa12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Pls1Q3V0K9 630 aa12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Pus3Q9JI38 481 aa12.51□□□□□ -0.41
Col20a1-201ENSMUST00000108856 N4bp2F8VQG7 1678 aaKnown RBP12.5□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Pik3c2aQ61194 1686 aa12.5□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Cyp2c23E9Q5K4 494 aa12.5□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Specc1lQ2KN98 1118 aaKnown RBP12.5□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Wdr70Q3TWF6 657 aa12.5□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Arhgef6Q8K4I3 771 aa12.5□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Ctage5Q8R311 779 aa12.5□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Cfap53Q9D439 514 aa12.5□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Zkscan5Q9Z1D8 819 aa12.5□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Ubxn2bQ0KL01 331 aa12.5□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Strip1Q8C079 837 aa12.5□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Kcnk13Q8R1P5 405 aa12.5□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Rbm43Q99J64 343 aa12.5□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Ehd4Q9EQP2 541 aa12.5□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Bcl9Q9D219 1425 aa12.5□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Ube4aE9Q735 1028 aa12.5□□□□□ -0.41
Col20a1-201ENSMUST00000108856 MthfslL7N466 203 aa12.5□□□□□ -0.41
Col20a1-201ENSMUST00000108856 NpeppsQ11011 920 aa12.5□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Hook3Q8BUK6 718 aa12.5□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Iffo1Q8BXL9 562 aa12.5□□□□□ -0.41
Col20a1-201ENSMUST00000108856 PaoxQ8C0L6 504 aa12.5□□□□□ -0.41
Col20a1-201ENSMUST00000108856 WaslQ91YD9 501 aa12.5□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Ciao1Q99KN2 339 aa12.5□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Spata31d1bE9QA57 1361 aa12.49□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Gm13023A2A8N2 498 aa12.49□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Clic6Q8BHB9 596 aa12.49□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Skor1Q8BX46 964 aa12.49□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Zfp113Q8C689 439 aa12.49□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Bmp2kQ91Z96 1138 aa12.49□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Mtmr2Q9Z2D1 643 aa12.49□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Lekr1B2RVN1 116 aa12.49□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Gna11P21278 359 aa12.49□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Ca8P28651 291 aa12.49□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Cd22P35329 862 aa12.49□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Nlrp2Q4PLS0 1046 aaKnown RBP12.49□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Lrit1Q8K099 624 aa12.49□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Tmod4Q9JLH8 345 aa12.49□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Camta1A2A891 1682 aa12.49□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Med1Q925J9 1575 aa12.49□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Tbc1d2B1AVH7 922 aa12.49□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Cyp26a1O55127 497 aa12.49□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Plbd2Q3TCN2 594 aa12.49□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Rnf123Q5XPI3 1314 aa12.49□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Eef2kO08796 724 aa12.49□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Samsn1P57725 372 aa12.49□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Ccdc57Q6PHN1 1016 aa12.49□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Hexim1Q8R409 356 aaKnown RBP12.49□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Tubgcp2Q921G8 905 aa12.49□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Col14a1Q80X19 1797 aa12.48□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Gm20425E9Q035 978 aaKnown RBP12.48□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Epb41l2O70318 988 aaKnown RBP12.48□□□□□ -0.41
Col20a1-201ENSMUST00000108856 SrprbP47758 269 aa12.48□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Ubxn10Q8BG34 277 aa12.48□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Desi2Q9D291 194 aa12.48□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Ranbp1P34022 203 aaKnown RBP12.48□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Tcerg1lQ3B807 590 aa12.48□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Lrrc8aQ80WG5 810 aa12.48□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Bst2Q8R2Q8 172 aa12.48□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Ubxn1Q922Y1 297 aa12.48□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Fam114a1Q9D281 569 aa12.48□□□□□ -0.41
Col20a1-201ENSMUST00000108856 AdnpQ9Z103 1108 aaKnown RBP12.48□□□□□ -0.41
Col20a1-201ENSMUST00000108856 Tfcp2l1Q3UNW5 479 aa12.48□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms