RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Vps41Q5KU39 853 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Trim21Q62191 470 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Otud6aQ6IE21 290 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Kiaa1328Q6NZK5 612 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Zbtb39Q6PDK0 712 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Avl9Q80U56 649 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Zkscan1Q8BGS3 561 aaKnown RBP9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Ces2aQ8QZR3 558 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Pdcd7Q9WTY1 482 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 P4ha2Q60716 537 aa9.97□□□□□ -0.81
Clcn3-202ENSMUST00000056508 SnupnQ80W37 358 aa9.97□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Senp7Q8BUH8 1037 aa9.97□□□□□ -0.81
Clcn3-202ENSMUST00000056508 PalmQ9Z0P4 383 aa9.97□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Smpd5D6MZJ6 483 aa9.97□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Tbc1d32Q3URV1 1296 aa9.97□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Ephb1Q8CBF3 984 aa9.97□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Klc3Q91W40 508 aa9.97□□□□□ -0.81
Clcn3-202ENSMUST00000056508 SncbQ91ZZ3 133 aa9.97□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Psrc1Q9D0P7 329 aa9.97□□□□□ -0.81
Clcn3-202ENSMUST00000056508 4930548H24RikQ9D496 437 aa9.97□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Pabpc4lG5E8X2 370 aa9.97□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Tgif2Q8C0Y1 237 aa9.97□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Agr3Q8R3W7 165 aa9.97□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Stk38Q91VJ4 465 aa9.97□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Pqbp1Q91VJ5 263 aaKnown RBP9.97□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Pus10Q9D3U0 527 aa9.97□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Rab27aQ9ERI2 221 aa9.97□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Mmel1Q9JLI3 765 aa9.97□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Opa1P58281 960 aa9.97□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Mcf2lQ64096 1149 aa9.97□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Tspan9Q8BJU2 239 aa9.97□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Lsm14aQ8K2F8 462 aaKnown RBP9.97□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Rassf7Q9DD19 359 aa9.97□□□□□ -0.81
Clcn3-202ENSMUST00000056508 RpgrQ9R0X5 1001 aa9.97□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Cog1Q9Z160 980 aa9.97□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Q3KNL4 93 aa9.96□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Gm813Q3UWK9 176 aa9.96□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Ebag9Q9D0V7 213 aa9.96□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Ttll8A4Q9F1 832 aa9.96□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Clip3B9EHT4 547 aa9.96□□□□□ -0.81
Clcn3-202ENSMUST00000056508 BhmtO35490 407 aaKnown RBP9.96□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Tuba1bP05213 451 aa9.96□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Gdi1P50396 447 aa9.96□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Tuba1aP68369 451 aa9.96□□□□□ -0.81
Clcn3-202ENSMUST00000056508 CcncQ62447 283 aa9.96□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Gdap1l1Q8VE33 370 aa9.96□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Dnaaf1Q9D2H9 634 aa9.96□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Gm6370A0A0G2JGX9 315 aa9.96□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Gm6309L7N481 315 aa9.96□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Cetn3O35648 167 aa9.96□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Tsc22d1P62500 1077 aa9.96□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Smarcc1P97496 1104 aa9.96□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Dact3Q0PHV7 610 aa9.96□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Gpr139Q80UC8 345 aa9.96□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Phf20Q8BLG0 1010 aaKnown RBP9.96□□□□□ -0.82
Clcn3-202ENSMUST00000056508 N4bp2l2Q8JZS6 575 aa9.96□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Stmn4P63042 189 aa9.96□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Nrsn1P97799 196 aa9.96□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Ehbp1Q69ZW3 1231 aa9.96□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Kif2bQ8C0N1 668 aa9.96□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Art3Q8R2G4 371 aa9.96□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Nrbp1Q99J45 535 aa9.96□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Rcan1Q9JHG6 198 aa9.96□□□□□ -0.82
Clcn3-202ENSMUST00000056508 TpbpaP13438 124 aa9.96□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Mrps26Q80ZS3 200 aa9.96□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Mrpl28Q9D1B9 257 aa9.96□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Lztfl1Q9JHQ5 299 aa9.96□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Bnip3lQ9Z2F7 218 aa9.96□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Arhgef10lA2AWP8 1280 aa9.95□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Cavin1O54724 392 aa9.95□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Prickle1Q3U5C7 832 aa9.95□□□□□ -0.82
Clcn3-202ENSMUST00000056508 VcpkmtQ8C436 228 aa9.95□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Llcfc1Q9D9P8 108 aa9.95□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Uso1Q9Z1Z0 959 aaKnown RBP9.95□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Ampd3O08739 766 aa9.95□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Paip2bQ91W45 136 aa9.95□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Tex16F6WNY1 1150 aa9.95□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Fgfr1P16092 822 aa9.95□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Atp13a4Q5XF90 1193 aa9.95□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Kiaa1841Q68FF0 718 aa9.95□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Olfml1Q8BSH2 233 aa9.95□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Jph3Q9ET77 744 aa9.95□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Sycp2lA0A0M3U1B0 842 aa9.95□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Becn2P0DM65 447 aa9.95□□□□□ -0.82
Clcn3-202ENSMUST00000056508 TaglnP37804 201 aaKnown RBP9.95□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Cracr2aQ3UP38 310 aa9.95□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Znf652Q5DU09 608 aa9.95□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Adam1aQ60813 791 aa9.95□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Ctnna2Q61301 953 aa9.95□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Ankrd13dQ6PD24 605 aa9.95□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Znf18Q810A1 556 aa9.95□□□□□ -0.82
Clcn3-202ENSMUST00000056508 TxlnbQ8VBT1 685 aa9.95□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Rilpl2Q99LE1 197 aa9.95□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Spata1Q9D5R4 444 aa9.95□□□□□ -0.82
Clcn3-202ENSMUST00000056508 4930523C07RikE9Q2T4 99 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Ppp1r7Q3UM45 361 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Ppp4r3aQ6P2K6 820 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Pof1bQ8K4L4 587 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Scrn2Q8VCA8 425 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Emc3Q99KI3 261 aa9.94□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 83.7 ms