RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Sh3d21Q7TSG5 549 aa11.12□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Ube3bQ9ES34 1070 aa11.12□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Clip2Q9Z0H8 1047 aa11.12□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Krt8P11679 490 aaKnown RBP11.12□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Zfp113Q8C689 439 aa11.12□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Rab3il1Q8VDV3 383 aa11.12□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Sept3Q9Z1S5 350 aa11.12□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Snapc4Q8BP86 1333 aa11.11□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Med1Q925J9 1575 aa11.11□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Bin2D3Z6Q9 489 aa11.11□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Zfp42P22227 288 aa11.11□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Capza3P70190 299 aa11.11□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Dok7Q18PE0 504 aa11.11□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Atp1a3Q6PIC6 1013 aa11.11□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Gle1Q8R322 699 aa11.11□□□□□ -0.63
Ldlr-201ENSMUST00000034713 ChmQ9QXG2 665 aa11.11□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Abca14E9Q8F8 1683 aa11.11□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Ankrd35E9Q9D8 996 aa11.11□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Zfp213E9QAW0 468 aa11.11□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Cdcp1Q5U462 833 aa11.11□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Ift20Q61025 132 aa11.11□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Prpf40bQ80W14 870 aa11.11□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Dnaaf2Q8BPI1 814 aa11.11□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Kiaa1524Q8BWY9 907 aa11.11□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Ndufab1Q9CR21 156 aa11.11□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Lman1Q9D0F3 517 aa11.11□□□□□ -0.63
Ldlr-201ENSMUST00000034713 DbnlQ62418 436 aa11.11□□□□□ -0.63
Ldlr-201ENSMUST00000034713 4930504O13RikQ8C5Z9 145 aa11.11□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Ints4Q8CIM8 964 aa11.11□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Lonp2Q9DBN5 852 aa11.11□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Flt4P35917 1363 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 MypnQ5DTJ9 1315 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Plekhg2Q6KAU7 1340 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Pak1O88643 545 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 EsrrbQ61539 433 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Nap1l4Q78ZA7 375 aaKnown RBP11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Susd4Q8BH32 490 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Haus1Q8BHX1 278 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Usp37Q8C0R0 979 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Ints5Q8CHT3 1018 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Cep19Q9CQA8 163 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Mst1rQ62190 1378 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 PparaP23204 468 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Tmtc2Q56A06 836 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Wdr3Q8BHB4 942 aaKnown RBP11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Hgh1Q8C3I8 393 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Krt222Q8CCX5 294 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Kif17Q99PW8 1038 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Polr2dQ9D7M8 142 aaKnown RBP11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Col14a1Q80X19 1797 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Apol10bG3X9K7 334 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 PcQ05920 1178 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Atp1a2Q6PIE5 1020 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Srp68Q8BMA6 625 aaKnown RBP11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 MypopQ8R4U1 393 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Gdf11Q9Z1W4 405 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Cyp2c23E9Q5K4 494 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Mybl2P48972 704 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Mybpc2Q5XKE0 1136 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Naa30Q8CES0 364 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Ctnnbl1Q9CWL8 563 aaKnown RBP11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Mrps25Q9D125 171 aaKnown RBP11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Ccdc91Q9D8L5 442 aa11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Akap8Q9DBR0 687 aaKnown RBP11.1□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Spata18Q0P557 537 aa11.09□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Strip1Q8C079 837 aa11.09□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Ccdc170D3YXL0 722 aa11.09□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Ddx31Q6NZQ2 687 aaKnown RBP11.09□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Unc5clQ6R653 518 aa11.09□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Ppp2r2cQ8BG02 447 aa11.09□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Ifi35Q9D8C4 286 aa11.09□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Pik3c2bE9QAN8 1632 aa11.09□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Kif5cP28738 956 aaKnown RBP11.09□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Bicd1Q8BR07 835 aa11.09□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Pak2Q8CIN4 524 aa11.09□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Angptl3Q9R182 455 aa11.09□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Tulp1Q9Z273 543 aa11.09□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Tbc1d2B1AVH7 922 aa11.08□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Prl7a2O54831 253 aa11.08□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Eif6O55135 245 aa11.08□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Pfkfb1P70266 471 aa11.08□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Map3k12Q60700 888 aa11.08□□□□□ -0.63
Ldlr-201ENSMUST00000034713 VmacQ8BP01 174 aa11.08□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Efcab8Q8C9R9 203 aa11.08□□□□□ -0.63
Ldlr-201ENSMUST00000034713 9230110C19RikQ8CC70 267 aa11.08□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Atad2Q8CDM1 1040 aa11.08□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Trmt44Q9D2Q2 713 aa11.08□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Homer1Q9Z2Y3 366 aa11.08□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Bpifb4A2BGH0 617 aa11.08□□□□□ -0.64
Ldlr-201ENSMUST00000034713 AK157302I3ITR1 129 aa11.08□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Large2Q5XPT3 690 aa11.08□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Cdca7lQ922M5 438 aa11.08□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Isca1Q9D924 129 aa11.08□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Eftud2O08810 971 aaKnown RBP11.08□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Psmb7P70195 277 aa11.08□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Bicdl2Q8CHW5 507 aa11.08□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Paip2Q9D6V8 124 aa11.08□□□□□ -0.64
Ldlr-201ENSMUST00000034713 FliiQ9JJ28 1271 aa11.08□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Myo3bQ1EG27 1305 aa11.08□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Gm43638A0A0J9YU36 694 aa11.08□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms