RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 Nlrp9aQ66X03 949 aa21.01■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Pold4Q9CWP8 107 aa21.01■□□□□ 0.95
Ubp1-201ENSMUST00000009885 AdgbG3UZ78 1657 aa21.01■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Wdr17E9Q271 1322 aa21■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Cyp3a57D3YYZ0 503 aa21■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Rad23bP54728 416 aa21■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Tubb5P99024 444 aaKnown RBP21■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Tubb2aQ7TMM9 445 aa21■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Tubb2bQ9CWF2 445 aa21■□□□□ 0.95
Ubp1-201ENSMUST00000009885 SyncQ9EPM5 470 aa21■□□□□ 0.95
Ubp1-201ENSMUST00000009885 RabggtaQ9JHK4 567 aa21■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Casz1Q9CWL2 1761 aa21■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Sval3Q76I99 144 aa21■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Krit1Q6S5J6 736 aa21■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Ranbp6Q8BIV3 1105 aa21■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Palm3A2TJV2 734 aa20.99■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Ugt1a8D3Z748 530 aa20.99■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Ugt1a10E9PXN7 530 aa20.99■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Eaf2Q91ZD6 262 aa20.99■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Otud7bB2RUR8 840 aa20.99■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Bin2D3Z6Q9 489 aa20.99■□□□□ 0.95
Ubp1-201ENSMUST00000009885 ChkbO55229 394 aa20.99■□□□□ 0.95
Ubp1-201ENSMUST00000009885 4930572O03RikQ8C5Y0 211 aa20.99■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Eif3bQ8JZQ9 803 aaKnown RBP20.99■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Pik3c2bE9QAN8 1632 aa20.99■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Tex13c2A0A0G2JGA3 530 aa20.99■□□□□ 0.95
Ubp1-201ENSMUST00000009885 NelfbQ8C4Y3 580 aa20.99■□□□□ 0.95
Ubp1-201ENSMUST00000009885 AvenQ9D9K3 342 aa20.99■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Ube3aO08759 870 aa20.98■□□□□ 0.95
Ubp1-201ENSMUST00000009885 ByslO54825 436 aaKnown RBP20.98■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Mcm5P49718 733 aa20.98■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Slc12a2P55012 1205 aa20.98■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Hdhd2Q3UGR5 259 aa20.98■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Prpf40bQ80W14 870 aa20.98■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Sox30Q8CGW4 782 aa20.98■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Phldb3E9QAF4 648 aa20.98■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Ftl2P49945 183 aa20.98■□□□□ 0.95
Ubp1-201ENSMUST00000009885 NntQ61941 1086 aaKnown RBP20.98■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Tbc1d5Q80XQ2 815 aa20.98■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Taf6lQ8R2K4 616 aa20.98■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Ubac1Q8VDI7 409 aa20.98■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Etnk1Q9D4V0 363 aa20.98■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Mast3Q3U214 1321 aa20.98■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Pak1O88643 545 aa20.98■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Klra1P20937 262 aa20.98■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Asic3Q6X1Y6 530 aa20.98■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Phc3Q8CHP6 981 aa20.98■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Arhgef6Q8K4I3 771 aa20.98■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Copb1Q9JIF7 953 aa20.98■□□□□ 0.95
Ubp1-201ENSMUST00000009885 MycbpapQ5SUV2 932 aa20.97■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Coro7Q9D2V7 922 aa20.97■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Sik3Q6P4S6 1311 aa20.97■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Slc4a4O88343 1079 aa20.97■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Smg7Q5RJH6 1138 aaKnown RBP20.97■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Efcc1Q9JJF6 558 aa20.97■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Acad12D3Z7X0 555 aa20.96■□□□□ 0.95
Ubp1-201ENSMUST00000009885 PpardP35396 440 aa20.96■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Foxp1P58462 705 aa20.96■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Tmx4Q8C0L0 335 aa20.96■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Sept12Q9D451 317 aa20.96■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Trp53inp1Q9QXE4 239 aa20.96■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Kif13aQ9EQW7 1749 aa20.96■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Slc27a1Q60714 646 aa20.96■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Ncapg2Q6DFV1 1138 aa20.96■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Tnip1Q9WUU8 647 aa20.96■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Atp8b5A3FIN4 1183 aa20.96■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Nkx2-5P42582 318 aa20.96■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Gfpt1P47856 697 aa20.96■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Atp8b1Q148W0 1251 aa20.96■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Als2cr12Q8BVM7 383 aa20.96■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Syf2Q9D198 242 aaKnown RBP20.96■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Gjc1P28229 396 aa20.95■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Ankrd13cQ3UX43 541 aa20.95■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Tsr1Q5SWD9 803 aa20.95■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Irak1Q62406 710 aa20.95■□□□□ 0.95
Ubp1-201ENSMUST00000009885 D130040H23RikQ8BII3 405 aa20.95■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Dbndd2Q9CRD4 158 aa20.95■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Sf3a3Q9D554 501 aaKnown RBP20.95■□□□□ 0.95
Ubp1-201ENSMUST00000009885 Fut8Q9WTS2 575 aa20.95■□□□□ 0.95
Ubp1-201ENSMUST00000009885 LtbrP50284 415 aa20.95■□□□□ 0.94
Ubp1-201ENSMUST00000009885 Cct6bQ61390 531 aa20.95■□□□□ 0.94
Ubp1-201ENSMUST00000009885 Dnph1Q80VJ3 173 aa20.95■□□□□ 0.94
Ubp1-201ENSMUST00000009885 Spata16Q8C636 571 aa20.95■□□□□ 0.94
Ubp1-201ENSMUST00000009885 Riok1Q922Q2 567 aa20.95■□□□□ 0.94
Ubp1-201ENSMUST00000009885 Six6os1Q9CTN5 574 aa20.95■□□□□ 0.94
Ubp1-201ENSMUST00000009885 C2cd2E9Q3C1 696 aa20.95■□□□□ 0.94
Ubp1-201ENSMUST00000009885 Akap2O54931 893 aa20.95■□□□□ 0.94
Ubp1-201ENSMUST00000009885 Rbm43Q99J64 343 aa20.95■□□□□ 0.94
Ubp1-201ENSMUST00000009885 Stk39Q9Z1W9 556 aa20.95■□□□□ 0.94
Ubp1-201ENSMUST00000009885 Prdm2A2A7B5 1709 aaKnown RBP20.95■□□□□ 0.94
Ubp1-201ENSMUST00000009885 Zfand4D3Z3C6 739 aa20.94■□□□□ 0.94
Ubp1-201ENSMUST00000009885 Speer4aF8VPX6 267 aa20.94■□□□□ 0.94
Ubp1-201ENSMUST00000009885 CltaO08585 235 aa20.94■□□□□ 0.94
Ubp1-201ENSMUST00000009885 Rexo5D3YW29 759 aa20.94■□□□□ 0.94
Ubp1-201ENSMUST00000009885 Map10Q8BJS7 891 aa20.94■□□□□ 0.94
Ubp1-201ENSMUST00000009885 CrklP47941 303 aa20.94■□□□□ 0.94
Ubp1-201ENSMUST00000009885 Rassf10Q8BL43 508 aa20.94■□□□□ 0.94
Ubp1-201ENSMUST00000009885 RalylQ8BTF8 293 aa20.94■□□□□ 0.94
Ubp1-201ENSMUST00000009885 Triml1Q8BVP1 470 aa20.94■□□□□ 0.94
Ubp1-201ENSMUST00000009885 Meis3P97368 378 aa20.93■□□□□ 0.94
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms