RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Ovgp1Q62010 721 aa21.34■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Tas2r124Q7M718 309 aa21.34■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Pus7lQ8CE46 702 aa21.34■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Q8CEZ4 452 aa21.34■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Cxcl11Q9JHH5 100 aa21.34■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Dock5B2RY04 1868 aa21.34■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Actn3O88990 900 aaKnown RBP21.33■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Trim25Q61510 634 aaKnown RBP21.33■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Krt40Q6IFX3 439 aa21.33■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Sval3Q76I99 144 aa21.33■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Sept9Q80UG5 583 aa21.33■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Miga2Q8BK03 593 aa21.33■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 BaatQ91X34 420 aa21.33■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 BccipQ9CWI3 316 aa21.33■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Desi2Q9D291 194 aa21.33■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Lmbr1Q9JIT0 490 aa21.33■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Izumo3A6PWV3 263 aa21.33■■□□□ 1
Shkbp1-201ENSMUST00000003857 Zfp597E9Q6S0 419 aa21.33■■□□□ 1
Shkbp1-201ENSMUST00000003857 Ube4aE9Q735 1028 aa21.33■■□□□ 1
Shkbp1-201ENSMUST00000003857 NefhP19246 1090 aa21.33■■□□□ 1
Shkbp1-201ENSMUST00000003857 Pola2P33611 600 aa21.33■■□□□ 1
Shkbp1-201ENSMUST00000003857 LtbrP50284 415 aa21.33■■□□□ 1
Shkbp1-201ENSMUST00000003857 Adck2Q6NSR3 617 aa21.33■■□□□ 1
Shkbp1-201ENSMUST00000003857 Prr29B1ARI9 187 aa21.32■■□□□ 1
Shkbp1-201ENSMUST00000003857 Ncoa7Q6DFV7 943 aa21.32■■□□□ 1
Shkbp1-201ENSMUST00000003857 Rbm28Q8CGC6 750 aaKnown RBP21.32■■□□□ 1
Shkbp1-201ENSMUST00000003857 Taf6lQ8R2K4 616 aa21.32■■□□□ 1
Shkbp1-201ENSMUST00000003857 Popdc2Q9ES82 367 aa21.32■■□□□ 1
Shkbp1-201ENSMUST00000003857 A0A1Y7VML8 143 aa21.32■■□□□ 1
Shkbp1-201ENSMUST00000003857 Pbx1P41778 430 aa21.32■■□□□ 1
Shkbp1-201ENSMUST00000003857 Ddx54Q8K4L0 874 aaKnown RBP21.32■■□□□ 1
Shkbp1-201ENSMUST00000003857 Hexim1Q8R409 356 aaKnown RBP21.32■■□□□ 1
Shkbp1-201ENSMUST00000003857 Klhl40Q9D783 621 aa21.32■■□□□ 1
Shkbp1-201ENSMUST00000003857 Vstm4T1NXB5 319 aa21.32■■□□□ 1
Shkbp1-201ENSMUST00000003857 Rbbp6P97868 1790 aaKnown RBP21.32■■□□□ 1
Shkbp1-201ENSMUST00000003857 Abl1P00520 1123 aa21.31■■□□□ 1
Shkbp1-201ENSMUST00000003857 Sox5P35710 763 aa21.31■■□□□ 1
Shkbp1-201ENSMUST00000003857 Dynll1P63168 89 aa21.31■■□□□ 1
Shkbp1-201ENSMUST00000003857 Iqcb1Q8BP00 598 aa21.31■■□□□ 1
Shkbp1-201ENSMUST00000003857 SowahdQ8BY98 327 aa21.31■■□□□ 1
Shkbp1-201ENSMUST00000003857 Nat10Q8K224 1024 aaKnown RBP21.31■■□□□ 1
Shkbp1-201ENSMUST00000003857 Prr16A3KMN5 304 aa21.31■■□□□ 1
Shkbp1-201ENSMUST00000003857 Tpm4Q6IRU2 248 aa21.31■■□□□ 1
Shkbp1-201ENSMUST00000003857 Fez2Q6TYB5 348 aa21.31■■□□□ 1
Shkbp1-201ENSMUST00000003857 MlphQ91V27 590 aa21.31■■□□□ 1
Shkbp1-201ENSMUST00000003857 Tab2Q99K90 693 aa21.31■■□□□ 1
Shkbp1-201ENSMUST00000003857 Znf638Q61464 1960 aaKnown RBP21.31■■□□□ 1
Shkbp1-201ENSMUST00000003857 AW822073A0A0N4SUK1 652 aa21.3■■□□□ 1
Shkbp1-201ENSMUST00000003857 Casp1P29452 402 aa21.3■■□□□ 1
Shkbp1-201ENSMUST00000003857 TbcaP48428 108 aaKnown RBP21.3■■□□□ 1
Shkbp1-201ENSMUST00000003857 Eif5P59325 429 aaKnown RBP21.3■■□□□ 1
Shkbp1-201ENSMUST00000003857 DSCC1Q14AI0 399 aa21.3■■□□□ 1
Shkbp1-201ENSMUST00000003857 Necab1Q8BG18 352 aa21.3■■□□□ 1
Shkbp1-201ENSMUST00000003857 NgdnQ9DB96 315 aaKnown RBP21.3■■□□□ 1
Shkbp1-201ENSMUST00000003857 Rad23bP54728 416 aa21.3■■□□□ 1
Shkbp1-201ENSMUST00000003857 Mcm6P97311 821 aa21.3■■□□□ 1
Shkbp1-201ENSMUST00000003857 Hspa4Q61316 841 aa21.3■■□□□ 1
Shkbp1-201ENSMUST00000003857 Rbm15bQ6PHZ5 887 aaKnown RBP21.3■■□□□ 1
Shkbp1-201ENSMUST00000003857 Gga3Q8BMI3 718 aa21.3■■□□□ 1
Shkbp1-201ENSMUST00000003857 Ndufb9Q9CQJ8 179 aa21.3■■□□□ 1
Shkbp1-201ENSMUST00000003857 ParvgQ9ERD8 331 aa21.3■■□□□ 1
Shkbp1-201ENSMUST00000003857 Trip6Q9Z1Y4 480 aa21.3■■□□□ 1
Shkbp1-201ENSMUST00000003857 NesQ6P5H2 1864 aaKnown RBP21.29■■□□□ 1
Shkbp1-201ENSMUST00000003857 Rsrc2A2RTL5 376 aaKnown RBP21.29■■□□□ 1
Shkbp1-201ENSMUST00000003857 Sh3bp1P55194 680 aa21.29■■□□□ 1
Shkbp1-201ENSMUST00000003857 Rtkn2Q14B46 604 aa21.29■■□□□ 1
Shkbp1-201ENSMUST00000003857 QarsQ8BML9 775 aa21.29■■□□□ 1
Shkbp1-201ENSMUST00000003857 Caps2Q8BUG5 550 aa21.29■■□□□ 1
Shkbp1-201ENSMUST00000003857 Itga2bQ9QUM0 1033 aa21.29■■□□□ 1
Shkbp1-201ENSMUST00000003857 Mapk8ip1Q9WVI9 707 aa21.29■■□□□ 1
Shkbp1-201ENSMUST00000003857 Tuft1O08970 390 aa21.29■■□□□ 1
Shkbp1-201ENSMUST00000003857 Lamb3Q61087 1168 aa21.29■■□□□ 1
Shkbp1-201ENSMUST00000003857 Rbm12b2Q66JV4 834 aaKnown RBP21.29■■□□□ 1
Shkbp1-201ENSMUST00000003857 Ankrd23Q812A3 306 aa21.29■■□□□ 1
Shkbp1-201ENSMUST00000003857 Brms1Q99N20 246 aa21.29■■□□□ 1
Shkbp1-201ENSMUST00000003857 Thap2Q9D305 217 aa21.29■■□□□ 1
Shkbp1-201ENSMUST00000003857 Irs4Q9Z0Y7 1216 aa21.29■■□□□ 1
Shkbp1-201ENSMUST00000003857 Aox3G3X982 1335 aa21.28■■□□□ 1
Shkbp1-201ENSMUST00000003857 Calm1P0DP26 149 aaKnown RBP21.28■■□□□ 1
Shkbp1-201ENSMUST00000003857 Calm2P0DP27 149 aaKnown RBP21.28■■□□□ 1
Shkbp1-201ENSMUST00000003857 Calm3P0DP28 149 aaKnown RBP21.28■■□□□ 1
Shkbp1-201ENSMUST00000003857 Sun3Q5SS91 320 aa21.28■■□□□ 1
Shkbp1-201ENSMUST00000003857 Mfap3Q922T2 349 aa21.28■■□□□ 1
Shkbp1-201ENSMUST00000003857 Wdr64Q9D565 1086 aa21.28■■□□□ 1
Shkbp1-201ENSMUST00000003857 Col20a1Q923P0 1320 aa21.28■■□□□ 1
Shkbp1-201ENSMUST00000003857 Cyp2j7A0A140T8U1 504 aa21.28■■□□□ 1
Shkbp1-201ENSMUST00000003857 4932429P05RikA2ADI4 785 aa21.28■■□□□ 1
Shkbp1-201ENSMUST00000003857 Ankrd63A2ARS0 390 aa21.28■■□□□ 1
Shkbp1-201ENSMUST00000003857 Zhx1P70121 873 aa21.28■■□□□ 1
Shkbp1-201ENSMUST00000003857 Irx2P81066 474 aa21.28■■□□□ 1
Shkbp1-201ENSMUST00000003857 Snai1Q02085 264 aa21.28■■□□□ 1
Shkbp1-201ENSMUST00000003857 Zc3h12cQ5DTV4 884 aa21.28■■□□□ 1
Shkbp1-201ENSMUST00000003857 Apobec3Q99J72 440 aaKnown RBP21.28■■□□□ 1
Shkbp1-201ENSMUST00000003857 Sh3bp5lQ99LH9 392 aa21.28■■□□□ 1
Shkbp1-201ENSMUST00000003857 Calml3Q9D6P8 149 aa21.28■■□□□ 1
Shkbp1-201ENSMUST00000003857 Rhbdl3P58873 404 aa21.27■■□□□ 1
Shkbp1-201ENSMUST00000003857 Ctr9Q62018 1173 aaKnown RBP21.27■■□□□ 1
Shkbp1-201ENSMUST00000003857 Wdr3Q8BHB4 942 aaKnown RBP21.27■■□□□ 1
Shkbp1-201ENSMUST00000003857 Nod2Q8K3Z0 1020 aa21.27■■□□□ 1
Shkbp1-201ENSMUST00000003857 Pcdha7Q91Y13 937 aa21.27■■□□□ 1
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms